RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 MPP5Q8N3R9 675 aa12.52□□□□□ -0.41
TREX1-203ENST00000456089 ENDOVQ8N8Q3 282 aaKnown RBP12.52□□□□□ -0.41
TREX1-203ENST00000456089 TFGQ92734 400 aaPredicted RBP12.52□□□□□ -0.41
TREX1-203ENST00000456089 CLIP3Q96DZ5 547 aa12.52□□□□□ -0.41
TREX1-203ENST00000456089 FCRL4Q96PJ5 515 aa12.52□□□□□ -0.41
TREX1-203ENST00000456089 KIFC1Q9BW19 673 aa12.52□□□□□ -0.41
TREX1-203ENST00000456089 MVB12BQ9H7P6 319 aa12.52□□□□□ -0.41
TREX1-203ENST00000456089 ASIC3Q9UHC3 531 aa12.52□□□□□ -0.41
TREX1-203ENST00000456089 GNPTGQ9UJJ9 305 aa12.52□□□□□ -0.41
TREX1-203ENST00000456089 SOX13Q9UN79 622 aa12.52□□□□□ -0.41
TREX1-203ENST00000456089 ASF1AQ9Y294 204 aa12.52□□□□□ -0.41
TREX1-203ENST00000456089 SAR1BQ9Y6B6 198 aa12.52□□□□□ -0.41
TREX1-203ENST00000456089 NUP210LQ5VU65 1888 aa12.51□□□□□ -0.41
TREX1-203ENST00000456089 ANKRD12Q6UB98 2062 aa12.51□□□□□ -0.41
TREX1-203ENST00000456089 MEN1O00255 615 aa12.51□□□□□ -0.41
TREX1-203ENST00000456089 MATN2O00339 956 aa12.51□□□□□ -0.41
TREX1-203ENST00000456089 PRMT5O14744 637 aaPredicted RBP12.51□□□□□ -0.41
TREX1-203ENST00000456089 HCRTR1O43613 425 aa12.51□□□□□ -0.41
TREX1-203ENST00000456089 AVILO75366 819 aa12.51□□□□□ -0.41
TREX1-203ENST00000456089 VAPBO95292 243 aa12.51□□□□□ -0.41
TREX1-203ENST00000456089 APOA4P06727 396 aa12.51□□□□□ -0.41
TREX1-203ENST00000456089 MLNP12872 115 aa12.51□□□□□ -0.41
TREX1-203ENST00000456089 MAGEA6P43360 314 aa12.51□□□□□ -0.41
TREX1-203ENST00000456089 UQCRFS1P47985 274 aa12.51□□□□□ -0.41
TREX1-203ENST00000456089 CSE1LP55060 971 aaKnown RBP12.51□□□□□ -0.41
TREX1-203ENST00000456089 DEFB110Q30KQ9 67 aa12.51□□□□□ -0.41
TREX1-203ENST00000456089 NADK2Q4G0N4 442 aa12.51□□□□□ -0.41
TREX1-203ENST00000456089 ZNF789Q5FWF6 425 aa12.51□□□□□ -0.41
TREX1-203ENST00000456089 ARMC3Q5W041 872 aa12.51□□□□□ -0.41
TREX1-203ENST00000456089 CES3Q6UWW8 571 aa12.51□□□□□ -0.41
TREX1-203ENST00000456089 ZNF534Q76KX8 674 aa12.51□□□□□ -0.41
TREX1-203ENST00000456089 PCGF5Q86SE9 256 aa12.51□□□□□ -0.41
TREX1-203ENST00000456089 SYVN1Q86TM6 617 aa12.51□□□□□ -0.41
TREX1-203ENST00000456089 LDB1Q86U70 411 aaPredicted RBP12.51□□□□□ -0.41
TREX1-203ENST00000456089 HOOK3Q86VS8 718 aa12.51□□□□□ -0.41
TREX1-203ENST00000456089 BPHLQ86WA6 291 aaPredicted RBP12.51□□□□□ -0.41
TREX1-203ENST00000456089 APLFQ8IW19 511 aaPredicted RBP12.51□□□□□ -0.41
TREX1-203ENST00000456089 PPIL6Q8IXY8 311 aa12.51□□□□□ -0.41
TREX1-203ENST00000456089 ADGRF3Q8IZF5 1079 aa12.51□□□□□ -0.41
TREX1-203ENST00000456089 DSELQ8IZU8 1212 aa12.51□□□□□ -0.41
TREX1-203ENST00000456089 MCUQ8NE86 351 aa12.51□□□□□ -0.41
TREX1-203ENST00000456089 OR5AR1Q8NGP9 310 aa12.51□□□□□ -0.41
TREX1-203ENST00000456089 ASZ1Q8WWH4 475 aa12.51□□□□□ -0.41
TREX1-203ENST00000456089 CPT1BQ92523 772 aa12.51□□□□□ -0.41
TREX1-203ENST00000456089 MIB2Q96AX9 1013 aa12.51□□□□□ -0.41
TREX1-203ENST00000456089 MFSD3Q96ES6 412 aa12.51□□□□□ -0.41
TREX1-203ENST00000456089 RUNDC3BQ96NL0 473 aa12.51□□□□□ -0.41
TREX1-203ENST00000456089 PANX3Q96QZ0 392 aa12.51□□□□□ -0.41
TREX1-203ENST00000456089 GPR87Q9BY21 358 aa12.51□□□□□ -0.41
TREX1-203ENST00000456089 C1GALT1Q9NS00 363 aa12.51□□□□□ -0.41
TREX1-203ENST00000456089 TREX1Q9NSU2 369 aa12.51□□□□□ -0.41
TREX1-203ENST00000456089 LUZP4Q9P127 313 aa12.51□□□□□ -0.41
TREX1-203ENST00000456089 ANKMY1Q9P2S6 941 aa12.51□□□□□ -0.41
TREX1-203ENST00000456089 PYCARDQ9ULZ3 195 aa12.51□□□□□ -0.41
TREX1-203ENST00000456089 PLAGL1Q9UM63 463 aa12.51□□□□□ -0.41
TREX1-203ENST00000456089 ICKQ9UPZ9 632 aa12.51□□□□□ -0.41
TREX1-203ENST00000456089 NBPF19A0A087WUL8 3843 aa12.5□□□□□ -0.41
TREX1-203ENST00000456089 A6NL46 340 aa12.5□□□□□ -0.41
TREX1-203ENST00000456089 CAPN1P07384 714 aa12.5□□□□□ -0.41
TREX1-203ENST00000456089 CTSBP07858 339 aa12.5□□□□□ -0.41
TREX1-203ENST00000456089 CYP2A7P20853 494 aa12.5□□□□□ -0.41
TREX1-203ENST00000456089 RORAP35398 523 aa12.5□□□□□ -0.41
TREX1-203ENST00000456089 EIF3BP55884 814 aaKnown RBP12.5□□□□□ -0.41
TREX1-203ENST00000456089 HSPA14Q0VDF9 509 aa12.5□□□□□ -0.41
TREX1-203ENST00000456089 THOC5Q13769 683 aaKnown RBP12.5□□□□□ -0.41
TREX1-203ENST00000456089 DHX34Q14147 1143 aaKnown RBP12.5□□□□□ -0.41
TREX1-203ENST00000456089 SEMA3AQ14563 771 aa12.5□□□□□ -0.41
TREX1-203ENST00000456089 RNF187Q5TA31 235 aaPredicted RBP12.5□□□□□ -0.41
TREX1-203ENST00000456089 ANKRD22Q5VYY1 191 aa12.5□□□□□ -0.41
TREX1-203ENST00000456089 FAM198BQ6UWH4 519 aa12.5□□□□□ -0.41
TREX1-203ENST00000456089 ZNF517Q6ZMY9 492 aaPredicted RBP12.5□□□□□ -0.41
TREX1-203ENST00000456089 CDHR3Q6ZTQ4 885 aa12.5□□□□□ -0.41
TREX1-203ENST00000456089 AMIGO1Q86WK6 493 aa12.5□□□□□ -0.41
TREX1-203ENST00000456089 LRRC6Q86X45 466 aa12.5□□□□□ -0.41
TREX1-203ENST00000456089 TMEM151BQ8IW70 566 aa12.5□□□□□ -0.41
TREX1-203ENST00000456089 SYTL1Q8IYJ3 562 aa12.5□□□□□ -0.41
TREX1-203ENST00000456089 LMNTD1Q8N9Z9 388 aa12.5□□□□□ -0.41
TREX1-203ENST00000456089 ADAMTS17Q8TE56 1095 aa12.5□□□□□ -0.41
TREX1-203ENST00000456089 SKA2Q8WVK7 121 aaPredicted RBP12.5□□□□□ -0.41
TREX1-203ENST00000456089 TRAPPC9Q96Q05 1148 aa12.5□□□□□ -0.41
TREX1-203ENST00000456089 SLC25A23Q9BV35 468 aa12.5□□□□□ -0.41
TREX1-203ENST00000456089 CARD6Q9BX69 1037 aa12.5□□□□□ -0.41
TREX1-203ENST00000456089 DDX47Q9H0S4 455 aaKnown RBP12.5□□□□□ -0.41
TREX1-203ENST00000456089 ING2Q9H160 280 aa12.5□□□□□ -0.41
TREX1-203ENST00000456089 ACTR5Q9H9F9 607 aaPredicted RBP12.5□□□□□ -0.41
TREX1-203ENST00000456089 FANCEQ9HB96 536 aa12.5□□□□□ -0.41
TREX1-203ENST00000456089 FAM60AQ9NP50 221 aa12.5□□□□□ -0.41
TREX1-203ENST00000456089 ACSS2Q9NR19 701 aa12.5□□□□□ -0.41
TREX1-203ENST00000456089 PCMTD2Q9NV79 361 aa12.5□□□□□ -0.41
TREX1-203ENST00000456089 ACTR10Q9NZ32 417 aa12.5□□□□□ -0.41
TREX1-203ENST00000456089 CIDEBQ9UHD4 219 aa12.5□□□□□ -0.41
TREX1-203ENST00000456089 POLG2Q9UHN1 485 aa12.5□□□□□ -0.41
TREX1-203ENST00000456089 SNX7Q9UNH6 387 aa12.5□□□□□ -0.41
TREX1-203ENST00000456089 VPS9D1Q9Y2B5 631 aa12.5□□□□□ -0.41
TREX1-203ENST00000456089 TDRKHQ9Y2W6 561 aaKnown RBP12.5□□□□□ -0.41
TREX1-203ENST00000456089 MAD1L1Q9Y6D9 718 aa12.5□□□□□ -0.41
TREX1-203ENST00000456089 LRRK2Q5S007 2527 aa12.5□□□□□ -0.41
TREX1-203ENST00000456089 KPNA5O15131 536 aa12.49□□□□□ -0.41
TREX1-203ENST00000456089 RECKO95980 971 aa12.49□□□□□ -0.41
TREX1-203ENST00000456089 RPN2P04844 631 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms