RNA–Protein interactions for RNA: ENST00000456040.1

R3HDM1-212, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-212ENST00000456040 MAGEA11P43364 429 aa3.19□□□□□ -1.9
R3HDM1-212ENST00000456040 SLC6A12P48065 614 aa3.19□□□□□ -1.9
R3HDM1-212ENST00000456040 MRPL12P52815 198 aaKnown RBP3.19□□□□□ -1.9
R3HDM1-212ENST00000456040 SIRPAP78324 504 aa3.19□□□□□ -1.9
R3HDM1-212ENST00000456040 CX3CL1P78423 397 aa3.19□□□□□ -1.9
R3HDM1-212ENST00000456040 SP3Q02447 781 aa3.19□□□□□ -1.9
R3HDM1-212ENST00000456040 CXCL9Q07325 125 aa3.19□□□□□ -1.9
R3HDM1-212ENST00000456040 WASHC5Q12768 1159 aa3.19□□□□□ -1.9
R3HDM1-212ENST00000456040 IRF3Q14653 427 aa3.19□□□□□ -1.9
R3HDM1-212ENST00000456040 NR1D2Q14995 579 aa3.19□□□□□ -1.9
R3HDM1-212ENST00000456040 KRTAP13-3Q3SY46 172 aa3.19□□□□□ -1.9
R3HDM1-212ENST00000456040 RILPL1Q5EBL4 403 aa3.19□□□□□ -1.9
R3HDM1-212ENST00000456040 RAB41Q5JT25 222 aa3.19□□□□□ -1.9
R3HDM1-212ENST00000456040 Q6ZSR9 355 aa3.19□□□□□ -1.9
R3HDM1-212ENST00000456040 HAUS6Q7Z4H7 955 aa3.19□□□□□ -1.9
R3HDM1-212ENST00000456040 VSIG1Q86XK7 387 aa3.19□□□□□ -1.9
R3HDM1-212ENST00000456040 HSCBQ8IWL3 235 aa3.19□□□□□ -1.9
R3HDM1-212ENST00000456040 LYG1Q8N1E2 194 aa3.19□□□□□ -1.9
R3HDM1-212ENST00000456040 ZNF614Q8N883 585 aa3.19□□□□□ -1.9
R3HDM1-212ENST00000456040 MOSPD2Q8NHP6 518 aa3.19□□□□□ -1.9
R3HDM1-212ENST00000456040 HPSE2Q8WWQ2 592 aa3.19□□□□□ -1.9
R3HDM1-212ENST00000456040 CDHR1Q96JP9 859 aa3.19□□□□□ -1.9
R3HDM1-212ENST00000456040 NEK1Q96PY6 1258 aa3.19□□□□□ -1.9
R3HDM1-212ENST00000456040 BAG1Q99933 345 aaPredicted RBP3.19□□□□□ -1.9
R3HDM1-212ENST00000456040 SYT15Q9BQS2 421 aa3.19□□□□□ -1.9
R3HDM1-212ENST00000456040 PYGO2Q9BRQ0 406 aa3.19□□□□□ -1.9
R3HDM1-212ENST00000456040 SYT11Q9BT88 431 aa3.19□□□□□ -1.9
R3HDM1-212ENST00000456040 MAK16Q9BXY0 300 aaKnown RBP3.19□□□□□ -1.9
R3HDM1-212ENST00000456040 VN1R1Q9GZP7 353 aa3.19□□□□□ -1.9
R3HDM1-212ENST00000456040 SPATC1LQ9H0A9 340 aa3.19□□□□□ -1.9
R3HDM1-212ENST00000456040 P2RY12Q9H244 342 aa3.19□□□□□ -1.9
R3HDM1-212ENST00000456040 ARRDC1-AS1Q9H2J1 176 aa3.19□□□□□ -1.9
R3HDM1-212ENST00000456040 KCNK15Q9H427 330 aa3.19□□□□□ -1.9
R3HDM1-212ENST00000456040 ARHGEF38Q9NXL2 777 aa3.19□□□□□ -1.9
R3HDM1-212ENST00000456040 CFDP1Q9UEE9 299 aaPredicted RBP3.19□□□□□ -1.9
R3HDM1-212ENST00000456040 ZDHHC2Q9UIJ5 367 aa3.19□□□□□ -1.9
R3HDM1-212ENST00000456040 ZNF148Q9UQR1 794 aa3.19□□□□□ -1.9
R3HDM1-212ENST00000456040 GRIP1Q9Y3R0 1128 aa3.19□□□□□ -1.9
R3HDM1-212ENST00000456040 BAZ1AQ9NRL2 1556 aaPredicted RBP3.19□□□□□ -1.9
R3HDM1-212ENST00000456040 IGLV7-46A0A075B6I9 117 aa3.18□□□□□ -1.9
R3HDM1-212ENST00000456040 GAPDHSO14556 408 aaPredicted RBP3.18□□□□□ -1.9
R3HDM1-212ENST00000456040 PRAMEF11O60813 436 aa3.18□□□□□ -1.9
R3HDM1-212ENST00000456040 SORBS2O94875 1100 aaKnown RBP3.18□□□□□ -1.9
R3HDM1-212ENST00000456040 HSPA4LO95757 839 aa3.18□□□□□ -1.9
R3HDM1-212ENST00000456040 MUTP22033 750 aa3.18□□□□□ -1.9
R3HDM1-212ENST00000456040 CA4P22748 312 aa3.18□□□□□ -1.9
R3HDM1-212ENST00000456040 CA6P23280 308 aa3.18□□□□□ -1.9
R3HDM1-212ENST00000456040 SP100P23497 879 aaPredicted RBP3.18□□□□□ -1.9
R3HDM1-212ENST00000456040 HOXD13P35453 343 aa3.18□□□□□ -1.9
R3HDM1-212ENST00000456040 SLC15A1P46059 708 aa3.18□□□□□ -1.9
R3HDM1-212ENST00000456040 PDX1P52945 283 aa3.18□□□□□ -1.9
R3HDM1-212ENST00000456040 PNLIPRP2P54317 469 aa3.18□□□□□ -1.9
R3HDM1-212ENST00000456040 SNX16P57768 344 aa3.18□□□□□ -1.9
R3HDM1-212ENST00000456040 CUL4AQ13619 759 aa3.18□□□□□ -1.9
R3HDM1-212ENST00000456040 HNRNPDQ14103 355 aaKnown RBP3.18□□□□□ -1.9
R3HDM1-212ENST00000456040 BECN1Q14457 450 aa3.18□□□□□ -1.9
R3HDM1-212ENST00000456040 PLEKHS1Q5SXH7 462 aa3.18□□□□□ -1.9
R3HDM1-212ENST00000456040 HECTD3Q5T447 861 aa3.18□□□□□ -1.9
R3HDM1-212ENST00000456040 SLC30A6Q6NXT4 461 aa3.18□□□□□ -1.9
R3HDM1-212ENST00000456040 LDB1Q86U70 411 aaPredicted RBP3.18□□□□□ -1.9
R3HDM1-212ENST00000456040 PIGZQ86VD9 579 aa3.18□□□□□ -1.9
R3HDM1-212ENST00000456040 COMMD2Q86X83 199 aa3.18□□□□□ -1.9
R3HDM1-212ENST00000456040 FAM114A1Q8IWE2 563 aa3.18□□□□□ -1.9
R3HDM1-212ENST00000456040 MARVELD2Q8N4S9 558 aa3.18□□□□□ -1.9
R3HDM1-212ENST00000456040 OR2T11Q8NH01 316 aa3.18□□□□□ -1.9
R3HDM1-212ENST00000456040 RBM4BQ9BQ04 359 aaKnown RBP3.18□□□□□ -1.9
R3HDM1-212ENST00000456040 DESI2Q9BSY9 194 aa3.18□□□□□ -1.9
R3HDM1-212ENST00000456040 MXD3Q9BW11 206 aa3.18□□□□□ -1.9
R3HDM1-212ENST00000456040 LAT2Q9GZY6 243 aa3.18□□□□□ -1.9
R3HDM1-212ENST00000456040 A4GALTQ9NPC4 353 aa3.18□□□□□ -1.9
R3HDM1-212ENST00000456040 PAK5Q9P286 719 aa3.18□□□□□ -1.9
R3HDM1-212ENST00000456040 SUCLA2Q9P2R7 463 aaPredicted RBP3.18□□□□□ -1.9
R3HDM1-212ENST00000456040 RPS6KA6Q9UK32 745 aa3.18□□□□□ -1.9
R3HDM1-212ENST00000456040 PLAGL1Q9UM63 463 aa3.18□□□□□ -1.9
R3HDM1-212ENST00000456040 PCDHGB4Q9UN71 923 aa3.18□□□□□ -1.9
R3HDM1-212ENST00000456040 RIPK3Q9Y572 518 aa3.18□□□□□ -1.9
R3HDM1-212ENST00000456040 NOTCH2Q04721 2471 aa3.17□□□□□ -1.9
R3HDM1-212ENST00000456040 hCG_1807616A0A1W2PRN6 198 aa3.17□□□□□ -1.9
R3HDM1-212ENST00000456040 HYKKA2RU49 373 aa3.17□□□□□ -1.9
R3HDM1-212ENST00000456040 HEPACAM2A8MVW5 462 aa3.17□□□□□ -1.9
R3HDM1-212ENST00000456040 H7C0S8 307 aa3.17□□□□□ -1.9
R3HDM1-212ENST00000456040 XRCC3O43542 346 aa3.17□□□□□ -1.9
R3HDM1-212ENST00000456040 RNASEH1O60930 286 aaKnown RBP3.17□□□□□ -1.9
R3HDM1-212ENST00000456040 GJB3O75712 270 aa3.17□□□□□ -1.9
R3HDM1-212ENST00000456040 PORP16435 677 aaPredicted RBP3.17□□□□□ -1.9
R3HDM1-212ENST00000456040 ACSL1P33121 698 aa3.17□□□□□ -1.9
R3HDM1-212ENST00000456040 HERV-K104P61576 105 aa3.17□□□□□ -1.9
R3HDM1-212ENST00000456040 KRT83P78385 493 aa3.17□□□□□ -1.9
R3HDM1-212ENST00000456040 CDK3Q00526 305 aa3.17□□□□□ -1.9
R3HDM1-212ENST00000456040 SGSM1Q2NKQ1 1148 aa3.17□□□□□ -1.9
R3HDM1-212ENST00000456040 CTU2Q2VPK5 515 aaKnown RBP3.17□□□□□ -1.9
R3HDM1-212ENST00000456040 TCTE1Q5JU00 501 aa3.17□□□□□ -1.9
R3HDM1-212ENST00000456040 SLC10A5Q5PT55 438 aa3.17□□□□□ -1.9
R3HDM1-212ENST00000456040 DHRS7BQ6IAN0 325 aaPredicted RBP3.17□□□□□ -1.9
R3HDM1-212ENST00000456040 ZNF613Q6PF04 617 aa3.17□□□□□ -1.9
R3HDM1-212ENST00000456040 GALNTL5Q7Z4T8 443 aa3.17□□□□□ -1.9
R3HDM1-212ENST00000456040 DNAJB7Q7Z6W7 309 aaPredicted RBP3.17□□□□□ -1.9
R3HDM1-212ENST00000456040 AACSQ86V21 672 aa3.17□□□□□ -1.9
R3HDM1-212ENST00000456040 IQCA1Q86XH1 822 aa3.17□□□□□ -1.9
R3HDM1-212ENST00000456040 RAB42Q8N4Z0 105 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms