RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 RNASEH2AO75792 299 aaKnown RBP13.32□□□□□ -0.28
CLK3-203ENST00000454830 TBCELQ5QJ74 424 aa13.32□□□□□ -0.28
CLK3-203ENST00000454830 VITQ6UXI7 678 aa13.32□□□□□ -0.28
CLK3-203ENST00000454830 ERN2Q76MJ5 926 aaKnown RBP13.32□□□□□ -0.28
CLK3-203ENST00000454830 TECPR1Q7Z6L1 1165 aa13.32□□□□□ -0.28
CLK3-203ENST00000454830 TCAIMQ8N3R3 496 aa13.32□□□□□ -0.28
CLK3-203ENST00000454830 CANT1Q8WVQ1 401 aa13.32□□□□□ -0.28
CLK3-203ENST00000454830 SEPHS2Q99611 448 aa13.32□□□□□ -0.28
CLK3-203ENST00000454830 C19orf43Q9BQ61 176 aa13.32□□□□□ -0.28
CLK3-203ENST00000454830 ALG2Q9H553 416 aa13.32□□□□□ -0.28
CLK3-203ENST00000454830 C1orf109Q9NX04 203 aa13.32□□□□□ -0.28
CLK3-203ENST00000454830 AP2A2O94973 939 aa13.31□□□□□ -0.28
CLK3-203ENST00000454830 MT-ND1P03886 318 aa13.31□□□□□ -0.28
CLK3-203ENST00000454830 ITGB7P26010 798 aa13.31□□□□□ -0.28
CLK3-203ENST00000454830 TIE1P35590 1138 aa13.31□□□□□ -0.28
CLK3-203ENST00000454830 MAD2L1Q13257 205 aaPredicted RBP13.31□□□□□ -0.28
CLK3-203ENST00000454830 MAPKAPK3Q16644 382 aa13.31□□□□□ -0.28
CLK3-203ENST00000454830 C2orf27AQ580R0 203 aa13.31□□□□□ -0.28
CLK3-203ENST00000454830 CES5AQ6NT32 575 aa13.31□□□□□ -0.28
CLK3-203ENST00000454830 AGTRAPQ6RW13 159 aa13.31□□□□□ -0.28
CLK3-203ENST00000454830 NUDT18Q6ZVK8 323 aa13.31□□□□□ -0.28
CLK3-203ENST00000454830 LRRC70Q7Z2Q7 622 aa13.31□□□□□ -0.28
CLK3-203ENST00000454830 ANKRD46Q86W74 232 aa13.31□□□□□ -0.28
CLK3-203ENST00000454830 SLC22A15Q8IZD6 547 aa13.31□□□□□ -0.28
CLK3-203ENST00000454830 FAM83CQ9BQN1 747 aa13.31□□□□□ -0.28
CLK3-203ENST00000454830 TBCDQ9BTW9 1192 aa13.31□□□□□ -0.28
CLK3-203ENST00000454830 TDRKHQ9Y2W6 561 aaKnown RBP13.31□□□□□ -0.28
CLK3-203ENST00000454830 EPOPA6NHQ4 379 aa13.31□□□□□ -0.28
CLK3-203ENST00000454830 GSTA4O15217 222 aa13.31□□□□□ -0.28
CLK3-203ENST00000454830 ENO2P09104 434 aaPredicted RBP13.31□□□□□ -0.28
CLK3-203ENST00000454830 MPC1LP0DKB6 136 aa13.31□□□□□ -0.28
CLK3-203ENST00000454830 HNMTP50135 292 aa13.31□□□□□ -0.28
CLK3-203ENST00000454830 AP1S2P56377 157 aa13.31□□□□□ -0.28
CLK3-203ENST00000454830 DCDC1P59894 354 aa13.31□□□□□ -0.28
CLK3-203ENST00000454830 CNTN1Q12860 1018 aa13.31□□□□□ -0.28
CLK3-203ENST00000454830 ADGRE1Q14246 886 aa13.31□□□□□ -0.28
CLK3-203ENST00000454830 INPP5AQ14642 412 aa13.31□□□□□ -0.28
CLK3-203ENST00000454830 EIF4HQ15056 248 aaKnown RBP13.31□□□□□ -0.28
CLK3-203ENST00000454830 TCEA2Q15560 299 aa13.31□□□□□ -0.28
CLK3-203ENST00000454830 CYP51A1Q16850 503 aa13.31□□□□□ -0.28
CLK3-203ENST00000454830 SPANXN4Q5MJ08 99 aa13.31□□□□□ -0.28
CLK3-203ENST00000454830 CYP2U1Q7Z449 544 aa13.31□□□□□ -0.28
CLK3-203ENST00000454830 GDE1Q9NZC3 331 aa13.31□□□□□ -0.28
CLK3-203ENST00000454830 TRPS1Q9UHF7 1281 aa13.31□□□□□ -0.28
CLK3-203ENST00000454830 FAM149AA5PLN7 773 aa13.31□□□□□ -0.28
CLK3-203ENST00000454830 GSNP06396 782 aa13.31□□□□□ -0.28
CLK3-203ENST00000454830 ATP6V1B2P21281 511 aa13.31□□□□□ -0.28
CLK3-203ENST00000454830 GSK3BP49841 420 aa13.31□□□□□ -0.28
CLK3-203ENST00000454830 ADGRG6Q86SQ4 1221 aa13.31□□□□□ -0.28
CLK3-203ENST00000454830 ACAT2Q9BWD1 397 aa13.31□□□□□ -0.28
CLK3-203ENST00000454830 CDH7Q9ULB5 785 aa13.31□□□□□ -0.28
CLK3-203ENST00000454830 USP22Q9UPT9 525 aa13.31□□□□□ -0.28
CLK3-203ENST00000454830 SAC3D1A6NKF1 404 aa13.3□□□□□ -0.28
CLK3-203ENST00000454830 RSL1D1O76021 490 aaKnown RBP13.3□□□□□ -0.28
CLK3-203ENST00000454830 SLC16A8O95907 504 aa13.3□□□□□ -0.28
CLK3-203ENST00000454830 APODP05090 189 aa13.3□□□□□ -0.28
CLK3-203ENST00000454830 PRR35P0CG20 571 aa13.3□□□□□ -0.28
CLK3-203ENST00000454830 IL10P22301 178 aa13.3□□□□□ -0.28
CLK3-203ENST00000454830 VARSP26640 1264 aaKnown RBP13.3□□□□□ -0.28
CLK3-203ENST00000454830 THOC6Q86W42 341 aaKnown RBP13.3□□□□□ -0.28
CLK3-203ENST00000454830 LILRA2Q8N149 483 aa13.3□□□□□ -0.28
CLK3-203ENST00000454830 SPDYE1Q8NFV5 336 aaPredicted RBP13.3□□□□□ -0.28
CLK3-203ENST00000454830 OR2T34Q8NGX1 318 aa13.3□□□□□ -0.28
CLK3-203ENST00000454830 OR2T3Q8NH03 318 aa13.3□□□□□ -0.28
CLK3-203ENST00000454830 OR52E6Q96RD3 313 aa13.3□□□□□ -0.28
CLK3-203ENST00000454830 NTMT1Q9BV86 223 aa13.3□□□□□ -0.28
CLK3-203ENST00000454830 PLA2G2FQ9BZM2 168 aa13.3□□□□□ -0.28
CLK3-203ENST00000454830 SMOXQ9NWM0 555 aa13.3□□□□□ -0.28
CLK3-203ENST00000454830 CFAP20Q9Y6A4 193 aaKnown RBP13.3□□□□□ -0.28
CLK3-203ENST00000454830 HELZP42694 1942 aaKnown RBP13.3□□□□□ -0.28
CLK3-203ENST00000454830 CROCCQ5TZA2 2017 aa13.3□□□□□ -0.28
CLK3-203ENST00000454830 FXYD1O00168 92 aa13.3□□□□□ -0.28
CLK3-203ENST00000454830 IFRD1O00458 451 aaPredicted RBP13.3□□□□□ -0.28
CLK3-203ENST00000454830 SCAMP1O15126 338 aa13.3□□□□□ -0.28
CLK3-203ENST00000454830 RNASEH1O60930 286 aaKnown RBP13.3□□□□□ -0.28
CLK3-203ENST00000454830 POP7O75817 140 aaKnown RBP13.3□□□□□ -0.28
CLK3-203ENST00000454830 TCF3P15923 654 aa13.3□□□□□ -0.28
CLK3-203ENST00000454830 PSMA4P25789 261 aaKnown RBP13.3□□□□□ -0.28
CLK3-203ENST00000454830 RHDQ02161 417 aa13.3□□□□□ -0.28
CLK3-203ENST00000454830 NANOGP8Q6NSW7 305 aa13.3□□□□□ -0.28
CLK3-203ENST00000454830 HACD2Q6Y1H2 254 aa13.3□□□□□ -0.28
CLK3-203ENST00000454830 TMPRSS11BQ86T26 416 aa13.3□□□□□ -0.28
CLK3-203ENST00000454830 ZFAND4Q86XD8 727 aa13.3□□□□□ -0.28
CLK3-203ENST00000454830 GPR156Q8NFN8 814 aa13.3□□□□□ -0.28
CLK3-203ENST00000454830 FAM129BQ96TA1 746 aa13.3□□□□□ -0.28
CLK3-203ENST00000454830 RPP25Q9BUL9 199 aaKnown RBP13.3□□□□□ -0.28
CLK3-203ENST00000454830 ACPTQ9BZG2 426 aa13.3□□□□□ -0.28
CLK3-203ENST00000454830 BRINP2Q9C0B6 783 aa13.3□□□□□ -0.28
CLK3-203ENST00000454830 NANOGQ9H9S0 305 aa13.3□□□□□ -0.28
CLK3-203ENST00000454830 MID1O15344 667 aa13.3□□□□□ -0.28
CLK3-203ENST00000454830 MTX3Q5HYI7 312 aa13.3□□□□□ -0.28
CLK3-203ENST00000454830 IRGCQ6NXR0 463 aa13.3□□□□□ -0.28
CLK3-203ENST00000454830 GPR149Q86SP6 731 aa13.3□□□□□ -0.28
CLK3-203ENST00000454830 MINDY1Q8N5J2 469 aa13.3□□□□□ -0.28
CLK3-203ENST00000454830 NCLNQ969V3 563 aa13.3□□□□□ -0.28
CLK3-203ENST00000454830 OSGEPL1Q9H4B0 414 aa13.3□□□□□ -0.28
CLK3-203ENST00000454830 LMCD1Q9NZU5 365 aa13.3□□□□□ -0.28
CLK3-203ENST00000454830 KLHL42Q9P2K6 505 aa13.3□□□□□ -0.28
CLK3-203ENST00000454830 ASF1AQ9Y294 204 aa13.3□□□□□ -0.28
CLK3-203ENST00000454830 IGLON5A6NGN9 336 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms