RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 TEX19Q8NA77 164 aa12.45□□□□□ -0.42
CHD3-206ENST00000452447 DPH2Q9BQC3 489 aaPredicted RBP12.45□□□□□ -0.42
CHD3-206ENST00000452447 EPN3Q9H201 632 aa12.45□□□□□ -0.42
CHD3-206ENST00000452447 FAM60AQ9NP50 221 aa12.45□□□□□ -0.42
CHD3-206ENST00000452447 TREX1Q9NSU2 369 aa12.45□□□□□ -0.42
CHD3-206ENST00000452447 IRAK4Q9NWZ3 460 aa12.45□□□□□ -0.42
CHD3-206ENST00000452447 SPHK1Q9NYA1 384 aa12.45□□□□□ -0.42
CHD3-206ENST00000452447 MARCH4Q9P2E8 410 aaPredicted RBP12.45□□□□□ -0.42
CHD3-206ENST00000452447 GNPTGQ9UJJ9 305 aa12.45□□□□□ -0.42
CHD3-206ENST00000452447 AP1M2Q9Y6Q5 423 aa12.45□□□□□ -0.42
CHD3-206ENST00000452447 TNRC6AQ8NDV7 1962 aaKnown RBP12.45□□□□□ -0.42
CHD3-206ENST00000452447 HECTD1Q9ULT8 2610 aa12.44□□□□□ -0.42
CHD3-206ENST00000452447 PTPN13Q12923 2485 aa12.44□□□□□ -0.42
CHD3-206ENST00000452447 CNTRLQ7Z7A1 2325 aa12.44□□□□□ -0.42
CHD3-206ENST00000452447 C9J4A7 227 aa12.44□□□□□ -0.42
CHD3-206ENST00000452447 KPNA5O15131 536 aa12.44□□□□□ -0.42
CHD3-206ENST00000452447 GPC4O75487 556 aa12.44□□□□□ -0.42
CHD3-206ENST00000452447 DNAJB5O75953 348 aa12.44□□□□□ -0.42
CHD3-206ENST00000452447 OR2B3O76000 313 aa12.44□□□□□ -0.42
CHD3-206ENST00000452447 TPBGLP0DKB5 382 aa12.44□□□□□ -0.42
CHD3-206ENST00000452447 MGAT1P26572 445 aa12.44□□□□□ -0.42
CHD3-206ENST00000452447 NMBRP28336 390 aa12.44□□□□□ -0.42
CHD3-206ENST00000452447 SARNPP82979 210 aaKnown RBP12.44□□□□□ -0.42
CHD3-206ENST00000452447 IL10RAQ13651 578 aa12.44□□□□□ -0.42
CHD3-206ENST00000452447 SLC5A12Q1EHB4 618 aa12.44□□□□□ -0.42
CHD3-206ENST00000452447 PTCHD3Q3KNS1 767 aa12.44□□□□□ -0.42
CHD3-206ENST00000452447 LCN10Q6JVE6 187 aa12.44□□□□□ -0.42
CHD3-206ENST00000452447 TTC23LQ6PF05 361 aa12.44□□□□□ -0.42
CHD3-206ENST00000452447 ASB18Q6ZVZ8 466 aa12.44□□□□□ -0.42
CHD3-206ENST00000452447 SDCCAG8Q86SQ7 713 aaPredicted RBP12.44□□□□□ -0.42
CHD3-206ENST00000452447 VRK3Q8IV63 474 aa12.44□□□□□ -0.42
CHD3-206ENST00000452447 DCUN1D3Q8IWE4 304 aa12.44□□□□□ -0.42
CHD3-206ENST00000452447 SKA2Q8WVK7 121 aaPredicted RBP12.44□□□□□ -0.42
CHD3-206ENST00000452447 SLC22A18Q96BI1 424 aa12.44□□□□□ -0.42
CHD3-206ENST00000452447 CHRNA10Q9GZZ6 450 aa12.44□□□□□ -0.42
CHD3-206ENST00000452447 ACSS2Q9NR19 701 aa12.44□□□□□ -0.42
CHD3-206ENST00000452447 TCFL5Q9UL49 500 aa12.44□□□□□ -0.42
CHD3-206ENST00000452447 SLC39A10Q9ULF5 831 aa12.44□□□□□ -0.42
CHD3-206ENST00000452447 TTC7AQ9ULT0 858 aaPredicted RBP12.44□□□□□ -0.42
CHD3-206ENST00000452447 CDYLQ9Y232 598 aa12.44□□□□□ -0.42
CHD3-206ENST00000452447 PPP2R2CQ9Y2T4 447 aa12.44□□□□□ -0.42
CHD3-206ENST00000452447 ARGFXA6NJG6 315 aa12.43□□□□□ -0.42
CHD3-206ENST00000452447 PFDN6O15212 129 aa12.43□□□□□ -0.42
CHD3-206ENST00000452447 SLCO2B1O94956 709 aa12.43□□□□□ -0.42
CHD3-206ENST00000452447 TPSB2P20231 275 aa12.43□□□□□ -0.42
CHD3-206ENST00000452447 NR1D1P20393 614 aa12.43□□□□□ -0.42
CHD3-206ENST00000452447 CD9P21926 228 aa12.43□□□□□ -0.42
CHD3-206ENST00000452447 AOAHP28039 575 aa12.43□□□□□ -0.42
CHD3-206ENST00000452447 TERF1P54274 439 aa12.43□□□□□ -0.42
CHD3-206ENST00000452447 CCZ1BP86790 482 aa12.43□□□□□ -0.42
CHD3-206ENST00000452447 CCZ1P86791 482 aaPredicted RBP12.43□□□□□ -0.42
CHD3-206ENST00000452447 TRIP13Q15645 432 aaPredicted RBP12.43□□□□□ -0.42
CHD3-206ENST00000452447 TPSAB1Q15661 275 aa12.43□□□□□ -0.42
CHD3-206ENST00000452447 ZIC1Q15915 447 aa12.43□□□□□ -0.42
CHD3-206ENST00000452447 DEFB110Q30KQ9 67 aa12.43□□□□□ -0.42
CHD3-206ENST00000452447 MRNIPQ6NTE8 343 aa12.43□□□□□ -0.42
CHD3-206ENST00000452447 LRRC8BQ6P9F7 803 aa12.43□□□□□ -0.42
CHD3-206ENST00000452447 UNC5DQ6UXZ4 953 aa12.43□□□□□ -0.42
CHD3-206ENST00000452447 OTOAQ7RTW8 1153 aa12.43□□□□□ -0.42
CHD3-206ENST00000452447 LRRC6Q86X45 466 aa12.43□□□□□ -0.42
CHD3-206ENST00000452447 LKAAEAR1Q8TD35 194 aa12.43□□□□□ -0.42
CHD3-206ENST00000452447 C17orf62Q9BQA9 187 aa12.43□□□□□ -0.42
CHD3-206ENST00000452447 KIFC1Q9BW19 673 aa12.43□□□□□ -0.42
CHD3-206ENST00000452447 ING2Q9H160 280 aa12.43□□□□□ -0.42
CHD3-206ENST00000452447 MRM3Q9HC36 420 aaKnown RBP12.43□□□□□ -0.42
CHD3-206ENST00000452447 SYBUQ9NX95 663 aa12.43□□□□□ -0.42
CHD3-206ENST00000452447 PADI2Q9Y2J8 665 aa12.43□□□□□ -0.42
CHD3-206ENST00000452447 LRRK2Q5S007 2527 aa12.43□□□□□ -0.42
CHD3-206ENST00000452447 VAPBO95292 243 aa12.43□□□□□ -0.42
CHD3-206ENST00000452447 PKLRP30613 574 aa12.43□□□□□ -0.42
CHD3-206ENST00000452447 VPS41P49754 854 aa12.43□□□□□ -0.42
CHD3-206ENST00000452447 CCL11P51671 97 aa12.43□□□□□ -0.42
CHD3-206ENST00000452447 EIF3BP55884 814 aaKnown RBP12.43□□□□□ -0.42
CHD3-206ENST00000452447 GPS1Q13098 491 aa12.43□□□□□ -0.42
CHD3-206ENST00000452447 CHAF1BQ13112 559 aa12.43□□□□□ -0.42
CHD3-206ENST00000452447 NCF4Q15080 339 aa12.43□□□□□ -0.42
CHD3-206ENST00000452447 KYNUQ16719 465 aa12.43□□□□□ -0.42
CHD3-206ENST00000452447 FAM198BQ6UWH4 519 aa12.43□□□□□ -0.42
CHD3-206ENST00000452447 CES3Q6UWW8 571 aa12.43□□□□□ -0.42
CHD3-206ENST00000452447 C2orf73Q8N5S3 287 aaPredicted RBP12.43□□□□□ -0.42
CHD3-206ENST00000452447 PRELID2Q8N945 189 aa12.43□□□□□ -0.42
CHD3-206ENST00000452447 FLVCR1-AS1Q8TAF5 88 aa12.43□□□□□ -0.42
CHD3-206ENST00000452447 MFSD3Q96ES6 412 aa12.43□□□□□ -0.42
CHD3-206ENST00000452447 FOPNLQ96NB1 174 aa12.43□□□□□ -0.42
CHD3-206ENST00000452447 SLC25A23Q9BV35 468 aa12.43□□□□□ -0.42
CHD3-206ENST00000452447 TRIM55Q9BYV6 548 aa12.43□□□□□ -0.42
CHD3-206ENST00000452447 SPRTNQ9H040 489 aaPredicted RBP12.43□□□□□ -0.42
CHD3-206ENST00000452447 P2RY12Q9H244 342 aa12.43□□□□□ -0.42
CHD3-206ENST00000452447 TXLNGQ9NUQ3 528 aa12.43□□□□□ -0.42
CHD3-206ENST00000452447 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.43□□□□□ -0.42
CHD3-206ENST00000452447 CIDEBQ9UHD4 219 aa12.43□□□□□ -0.42
CHD3-206ENST00000452447 MRFAP1Q9Y605 127 aa12.43□□□□□ -0.42
CHD3-206ENST00000452447 GOLGA8KD6RF30 607 aa12.42□□□□□ -0.42
CHD3-206ENST00000452447 GOLGA8TH3BQL2 631 aa12.42□□□□□ -0.42
CHD3-206ENST00000452447 K7EM74 188 aa12.42□□□□□ -0.42
CHD3-206ENST00000452447 ZSCAN9O15535 394 aaPredicted RBP12.42□□□□□ -0.42
CHD3-206ENST00000452447 TMEM63AO94886 807 aa12.42□□□□□ -0.42
CHD3-206ENST00000452447 S1PR4O95977 384 aa12.42□□□□□ -0.42
CHD3-206ENST00000452447 CAPN1P07384 714 aa12.42□□□□□ -0.42
CHD3-206ENST00000452447 PAMP19021 973 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms