RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 SLC5A12Q1EHB4 618 aa19.02■□□□□ 0.64
VCP-203ENST00000448530 ZNF789Q5FWF6 425 aa19.02■□□□□ 0.64
VCP-203ENST00000448530 OTOAQ7RTW8 1153 aa19.02■□□□□ 0.64
VCP-203ENST00000448530 VRK3Q8IV63 474 aa19.02■□□□□ 0.64
VCP-203ENST00000448530 APLFQ8IW19 511 aaPredicted RBP19.02■□□□□ 0.64
VCP-203ENST00000448530 ENDOVQ8N8Q3 282 aaKnown RBP19.02■□□□□ 0.64
VCP-203ENST00000448530 SKA2Q8WVK7 121 aaPredicted RBP19.02■□□□□ 0.64
VCP-203ENST00000448530 SLC22A18Q96BI1 424 aa19.02■□□□□ 0.64
VCP-203ENST00000448530 DPH2Q9BQC3 489 aaPredicted RBP19.02■□□□□ 0.64
VCP-203ENST00000448530 KIFC1Q9BW19 673 aa19.02■□□□□ 0.64
VCP-203ENST00000448530 NLNQ9BYT8 704 aa19.02■□□□□ 0.64
VCP-203ENST00000448530 PCMTD2Q9NV79 361 aa19.02■□□□□ 0.64
VCP-203ENST00000448530 SYBUQ9NX95 663 aa19.02■□□□□ 0.64
VCP-203ENST00000448530 SLC39A10Q9ULF5 831 aa19.02■□□□□ 0.64
VCP-203ENST00000448530 CDYLQ9Y232 598 aa19.02■□□□□ 0.64
VCP-203ENST00000448530 TP53TG5Q9Y2B4 290 aa19.02■□□□□ 0.64
VCP-203ENST00000448530 JRKLQ9Y4A0 524 aa19.02■□□□□ 0.64
VCP-203ENST00000448530 MRFAP1Q9Y605 127 aa19.02■□□□□ 0.64
VCP-203ENST00000448530 AP1M2Q9Y6Q5 423 aa19.02■□□□□ 0.64
VCP-203ENST00000448530 SLCO2B1O94956 709 aa19.01■□□□□ 0.63
VCP-203ENST00000448530 TPBGLP0DKB5 382 aa19.01■□□□□ 0.63
VCP-203ENST00000448530 PAMP19021 973 aa19.01■□□□□ 0.63
VCP-203ENST00000448530 PKLRP30613 574 aa19.01■□□□□ 0.63
VCP-203ENST00000448530 EIF3BP55884 814 aaKnown RBP19.01■□□□□ 0.63
VCP-203ENST00000448530 KYNUQ16719 465 aa19.01■□□□□ 0.63
VCP-203ENST00000448530 PTCHD3Q3KNS1 767 aa19.01■□□□□ 0.63
VCP-203ENST00000448530 RNF187Q5TA31 235 aaPredicted RBP19.01■□□□□ 0.63
VCP-203ENST00000448530 CASC4Q6P4E1 433 aa19.01■□□□□ 0.63
VCP-203ENST00000448530 MAGOHBQ96A72 148 aaKnown RBP19.01■□□□□ 0.63
VCP-203ENST00000448530 PBKQ96KB5 322 aa19.01■□□□□ 0.63
VCP-203ENST00000448530 NAP1L3Q99457 506 aaPredicted RBP19.01■□□□□ 0.63
VCP-203ENST00000448530 C17orf62Q9BQA9 187 aa19.01■□□□□ 0.63
VCP-203ENST00000448530 CHRNA10Q9GZZ6 450 aa19.01■□□□□ 0.63
VCP-203ENST00000448530 FAM60AQ9NP50 221 aa19.01■□□□□ 0.63
VCP-203ENST00000448530 SAMD15Q9P1V8 674 aa19.01■□□□□ 0.63
VCP-203ENST00000448530 TLK1Q9UKI8 766 aa19.01■□□□□ 0.63
VCP-203ENST00000448530 SOX13Q9UN79 622 aa19.01■□□□□ 0.63
VCP-203ENST00000448530 MYO18BQ8IUG5 2567 aa19.01■□□□□ 0.63
VCP-203ENST00000448530 KRT14P02533 472 aa19■□□□□ 0.63
VCP-203ENST00000448530 RPS3P23396 243 aaKnown RBP eCLIP19■□□□□ 0.639e-9■■■■■ 32.6
VCP-203ENST00000448530 CASRP41180 1078 aa19■□□□□ 0.63
VCP-203ENST00000448530 IL10RAQ13651 578 aa19■□□□□ 0.63
VCP-203ENST00000448530 DEFB110Q30KQ9 67 aa19■□□□□ 0.63
VCP-203ENST00000448530 LCN10Q6JVE6 187 aa19■□□□□ 0.63
VCP-203ENST00000448530 TCTN3Q6NUS6 607 aa19■□□□□ 0.63
VCP-203ENST00000448530 CES3Q6UWW8 571 aa19■□□□□ 0.63
VCP-203ENST00000448530 RAB42Q8N4Z0 105 aa19■□□□□ 0.63
VCP-203ENST00000448530 MFSD3Q96ES6 412 aa19■□□□□ 0.63
VCP-203ENST00000448530 FOPNLQ96NB1 174 aa19■□□□□ 0.63
VCP-203ENST00000448530 RAB11FIP5Q9BXF6 653 aa19■□□□□ 0.63
VCP-203ENST00000448530 P2RY12Q9H244 342 aa19■□□□□ 0.63
VCP-203ENST00000448530 ACSS2Q9NR19 701 aa19■□□□□ 0.63
VCP-203ENST00000448530 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19■□□□□ 0.63
VCP-203ENST00000448530 TCFL5Q9UL49 500 aa19■□□□□ 0.63
VCP-203ENST00000448530 PLCL2Q9UPR0 1127 aa19■□□□□ 0.63
VCP-203ENST00000448530 PADI2Q9Y2J8 665 aa19■□□□□ 0.63
VCP-203ENST00000448530 SEC16AO15027 2179 aa19■□□□□ 0.63
VCP-203ENST00000448530 SNRNP200O75643 2136 aaKnown RBP19■□□□□ 0.63
VCP-203ENST00000448530 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.99■□□□□ 0.63
VCP-203ENST00000448530 TCRBV7S3A2A0A539 114 aa18.99■□□□□ 0.63
VCP-203ENST00000448530 H3BMM5 538 aa18.99■□□□□ 0.63
VCP-203ENST00000448530 CD9P21926 228 aa18.99■□□□□ 0.63
VCP-203ENST00000448530 KLRB1Q12918 225 aa18.99■□□□□ 0.63
VCP-203ENST00000448530 NCF4Q15080 339 aa18.99■□□□□ 0.63
VCP-203ENST00000448530 ZIC1Q15915 447 aa18.99■□□□□ 0.63
VCP-203ENST00000448530 ARMC3Q5W041 872 aa18.99■□□□□ 0.63
VCP-203ENST00000448530 ASB18Q6ZVZ8 466 aa18.99■□□□□ 0.63
VCP-203ENST00000448530 TEX19Q8NA77 164 aa18.99■□□□□ 0.63
VCP-203ENST00000448530 FLVCR1-AS1Q8TAF5 88 aa18.99■□□□□ 0.63
VCP-203ENST00000448530 TCF12Q99081 682 aa18.99■□□□□ 0.63
VCP-203ENST00000448530 EPN3Q9H201 632 aa18.99■□□□□ 0.63
VCP-203ENST00000448530 TXLNGQ9NUQ3 528 aa18.99■□□□□ 0.63
VCP-203ENST00000448530 INTS7Q9NVH2 962 aaKnown RBP18.99■□□□□ 0.63
VCP-203ENST00000448530 CIDEBQ9UHD4 219 aa18.99■□□□□ 0.63
VCP-203ENST00000448530 GPN3Q9UHW5 284 aaPredicted RBP18.99■□□□□ 0.63
VCP-203ENST00000448530 SRPK3Q9UPE1 567 aa18.99■□□□□ 0.63
VCP-203ENST00000448530 FLNBO75369 2602 aaKnown RBP18.99■□□□□ 0.63
VCP-203ENST00000448530 ARGFXA6NJG6 315 aa18.98■□□□□ 0.63
VCP-203ENST00000448530 ZSCAN9O15535 394 aaPredicted RBP18.98■□□□□ 0.63
VCP-203ENST00000448530 S1PR4O95977 384 aa18.98■□□□□ 0.63
VCP-203ENST00000448530 NR1D1P20393 614 aa18.98■□□□□ 0.63
VCP-203ENST00000448530 PEBP1P30086 187 aaKnown RBP18.98■□□□□ 0.63
VCP-203ENST00000448530 FMO4P31512 558 aa18.98■□□□□ 0.63
VCP-203ENST00000448530 KCNJ11Q14654 390 aa18.98■□□□□ 0.63
VCP-203ENST00000448530 TLDC1Q6P9B6 456 aa18.98■□□□□ 0.63
VCP-203ENST00000448530 FAM198BQ6UWH4 519 aa18.98■□□□□ 0.63
VCP-203ENST00000448530 TAX1BP1Q86VP1 789 aa18.98■□□□□ 0.63
VCP-203ENST00000448530 RASGEF1CQ8N431 466 aa18.98■□□□□ 0.63
VCP-203ENST00000448530 C2orf73Q8N5S3 287 aaPredicted RBP18.98■□□□□ 0.63
VCP-203ENST00000448530 OR2L8Q8NGY9 312 aa18.98■□□□□ 0.63
VCP-203ENST00000448530 RAD51AP1Q96B01 352 aa18.98■□□□□ 0.63
VCP-203ENST00000448530 NDC1Q9BTX1 674 aa18.98■□□□□ 0.63
VCP-203ENST00000448530 SPRTNQ9H040 489 aaPredicted RBP18.98■□□□□ 0.63
VCP-203ENST00000448530 ING2Q9H160 280 aa18.98■□□□□ 0.63
VCP-203ENST00000448530 G3BP2Q9UN86 482 aaKnown RBP18.98■□□□□ 0.63
VCP-203ENST00000448530 VPS9D1Q9Y2B5 631 aa18.98■□□□□ 0.63
VCP-203ENST00000448530 GOLGA8KD6RF30 607 aa18.97■□□□□ 0.63
VCP-203ENST00000448530 GOLGA8TH3BQL2 631 aa18.97■□□□□ 0.63
VCP-203ENST00000448530 PGRMC1O00264 195 aaKnown RBP18.97■□□□□ 0.63
VCP-203ENST00000448530 RASGRF2O14827 1237 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms