RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 JMJD7P0C870 316 aa12.69□□□□□ -0.38
ERGIC3-209ENST00000447986 ZNF37AP17032 561 aaPredicted RBP12.69□□□□□ -0.38
ERGIC3-209ENST00000447986 POLR2CP19387 275 aaPredicted RBP12.69□□□□□ -0.38
ERGIC3-209ENST00000447986 HSD17B2P37059 387 aa12.69□□□□□ -0.38
ERGIC3-209ENST00000447986 MSH2P43246 934 aa12.69□□□□□ -0.38
ERGIC3-209ENST00000447986 BDKRB1P46663 353 aa12.69□□□□□ -0.38
ERGIC3-209ENST00000447986 GFERP55789 205 aa12.69□□□□□ -0.38
ERGIC3-209ENST00000447986 TAS2R39P59534 338 aa12.69□□□□□ -0.38
ERGIC3-209ENST00000447986 TIAL1Q01085 375 aaKnown RBP eCLIP12.69□□□□□ -0.38
ERGIC3-209ENST00000447986 EFTUD2Q15029 972 aaKnown RBP eCLIP12.69□□□□□ -0.388e-9■■■□□ 17.6
ERGIC3-209ENST00000447986 C3orf38Q5JPI3 329 aa12.69□□□□□ -0.38
ERGIC3-209ENST00000447986 WDR93Q6P2C0 686 aa12.69□□□□□ -0.38
ERGIC3-209ENST00000447986 UBE2R2Q712K3 238 aaPredicted RBP12.69□□□□□ -0.38
ERGIC3-209ENST00000447986 PIWIL4Q7Z3Z4 852 aaKnown RBP12.69□□□□□ -0.38
ERGIC3-209ENST00000447986 CNPY4Q8N129 248 aa12.69□□□□□ -0.38
ERGIC3-209ENST00000447986 CARFQ8N187 725 aa12.69□□□□□ -0.38
ERGIC3-209ENST00000447986 RCBTB1Q8NDN9 531 aa12.69□□□□□ -0.38
ERGIC3-209ENST00000447986 MCOLN3Q8TDD5 553 aa12.69□□□□□ -0.38
ERGIC3-209ENST00000447986 ASB11Q8WXH4 323 aa12.69□□□□□ -0.38
ERGIC3-209ENST00000447986 CCDC77Q9BR77 488 aa12.69□□□□□ -0.38
ERGIC3-209ENST00000447986 TRIM54Q9BYV2 358 aa12.69□□□□□ -0.38
ERGIC3-209ENST00000447986 XKR8Q9H6D3 395 aa12.69□□□□□ -0.38
ERGIC3-209ENST00000447986 POLR1BQ9H9Y6 1135 aa12.69□□□□□ -0.38
ERGIC3-209ENST00000447986 SPATA7Q9P0W8 599 aa12.69□□□□□ -0.38
ERGIC3-209ENST00000447986 AK5Q9Y6K8 562 aa12.69□□□□□ -0.38
ERGIC3-209ENST00000447986 RP1P56715 2156 aa12.69□□□□□ -0.38
ERGIC3-209ENST00000447986 ASXL3Q9C0F0 2248 aa12.68□□□□□ -0.38
ERGIC3-209ENST00000447986 EXOC1LA0A1B0GW35 172 aa12.68□□□□□ -0.38
ERGIC3-209ENST00000447986 TLCD2A6NGC4 264 aa12.68□□□□□ -0.38
ERGIC3-209ENST00000447986 BTN3A1O00481 513 aa12.68□□□□□ -0.38
ERGIC3-209ENST00000447986 PLD2O14939 933 aa12.68□□□□□ -0.38
ERGIC3-209ENST00000447986 SLC16A5O15375 505 aa12.68□□□□□ -0.38
ERGIC3-209ENST00000447986 SYF2O95926 243 aaKnown RBP12.68□□□□□ -0.38
ERGIC3-209ENST00000447986 HIST1H2AGP0C0S8 130 aaPredicted RBP12.68□□□□□ -0.38
ERGIC3-209ENST00000447986 MYBL2P10244 700 aa12.68□□□□□ -0.38
ERGIC3-209ENST00000447986 HIST1H2ADP20671 130 aa12.68□□□□□ -0.38
ERGIC3-209ENST00000447986 PKLRP30613 574 aa12.68□□□□□ -0.38
ERGIC3-209ENST00000447986 ARL4DP49703 201 aa12.68□□□□□ -0.38
ERGIC3-209ENST00000447986 SERPINB9P50453 376 aa12.68□□□□□ -0.38
ERGIC3-209ENST00000447986 GABREP78334 506 aa12.68□□□□□ -0.38
ERGIC3-209ENST00000447986 KIR2DS3Q14952 304 aa12.68□□□□□ -0.38
ERGIC3-209ENST00000447986 ERCC6LQ2NKX8 1250 aa12.68□□□□□ -0.38
ERGIC3-209ENST00000447986 LGSNQ5TDP6 509 aa12.68□□□□□ -0.38
ERGIC3-209ENST00000447986 CACHD1Q5VU97 1274 aa12.68□□□□□ -0.38
ERGIC3-209ENST00000447986 CYB5D1Q6P9G0 228 aa12.68□□□□□ -0.38
ERGIC3-209ENST00000447986 FOXR1Q6PIV2 292 aa12.68□□□□□ -0.38
ERGIC3-209ENST00000447986 CYHR1Q6ZMK1 362 aa12.68□□□□□ -0.38
ERGIC3-209ENST00000447986 FAM92BQ6ZTR7 304 aa12.68□□□□□ -0.38
ERGIC3-209ENST00000447986 RAPH1Q70E73 1250 aa12.68□□□□□ -0.38
ERGIC3-209ENST00000447986 PRSS42Q7Z5A4 293 aa12.68□□□□□ -0.38
ERGIC3-209ENST00000447986 MARCH9Q86YJ5 346 aa12.68□□□□□ -0.38
ERGIC3-209ENST00000447986 FBXO39Q8N4B4 442 aa12.68□□□□□ -0.38
ERGIC3-209ENST00000447986 FBXO15Q8NCQ5 510 aaPredicted RBP12.68□□□□□ -0.38
ERGIC3-209ENST00000447986 OR9A1PQ8NGU1 263 aa12.68□□□□□ -0.38
ERGIC3-209ENST00000447986 PDLIM5Q96HC4 596 aaKnown RBP12.68□□□□□ -0.38
ERGIC3-209ENST00000447986 HIST1H2AHQ96KK5 128 aa12.68□□□□□ -0.38
ERGIC3-209ENST00000447986 HIST1H2AJQ99878 128 aa12.68□□□□□ -0.38
ERGIC3-209ENST00000447986 H2AFJQ9BTM1 129 aa12.68□□□□□ -0.38
ERGIC3-209ENST00000447986 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.68□□□□□ -0.38
ERGIC3-209ENST00000447986 PLAGL1Q9UM63 463 aa12.68□□□□□ -0.38
ERGIC3-209ENST00000447986 SATB2Q9UPW6 733 aa12.68□□□□□ -0.38
ERGIC3-209ENST00000447986 LOXL2Q9Y4K0 774 aa12.68□□□□□ -0.38
ERGIC3-209ENST00000447986 PCDHGA8Q9Y5G5 932 aa12.68□□□□□ -0.38
ERGIC3-209ENST00000447986 V9GYY5 206 aaPredicted RBP12.68□□□□□ -0.38
ERGIC3-209ENST00000447986 TRABD2BA6NFA1 517 aa12.67□□□□□ -0.38
ERGIC3-209ENST00000447986 ARHGEF33A8MVX0 844 aa12.67□□□□□ -0.38
ERGIC3-209ENST00000447986 POC1B-GALNT4F8VUJ3 575 aa12.67□□□□□ -0.38
ERGIC3-209ENST00000447986 GFYI3L273 518 aa12.67□□□□□ -0.38
ERGIC3-209ENST00000447986 BTN3A3O00478 584 aa12.67□□□□□ -0.38
ERGIC3-209ENST00000447986 FAM155BO75949 473 aa12.67□□□□□ -0.38
ERGIC3-209ENST00000447986 KRT38O76015 456 aa12.67□□□□□ -0.38
ERGIC3-209ENST00000447986 MPOP05164 745 aa12.67□□□□□ -0.38
ERGIC3-209ENST00000447986 CHRM5P08912 532 aaPredicted RBP12.67□□□□□ -0.38
ERGIC3-209ENST00000447986 CD46P15529 392 aa12.67□□□□□ -0.38
ERGIC3-209ENST00000447986 CDH3P22223 829 aa12.67□□□□□ -0.38
ERGIC3-209ENST00000447986 CNTFP26441 200 aa12.67□□□□□ -0.38
ERGIC3-209ENST00000447986 RBMS1P29558 406 aaKnown RBP12.67□□□□□ -0.38
ERGIC3-209ENST00000447986 LSSP48449 732 aa12.67□□□□□ -0.38
ERGIC3-209ENST00000447986 RAB10P61026 200 aa12.67□□□□□ -0.38
ERGIC3-209ENST00000447986 VSNL1P62760 191 aa12.67□□□□□ -0.38
ERGIC3-209ENST00000447986 SLC29A2Q14542 456 aa12.67□□□□□ -0.38
ERGIC3-209ENST00000447986 ARHGAP19Q14CB8 494 aa12.67□□□□□ -0.38
ERGIC3-209ENST00000447986 RTP5Q14D33 572 aa12.67□□□□□ -0.38
ERGIC3-209ENST00000447986 ANKS6Q68DC2 871 aa12.67□□□□□ -0.38
ERGIC3-209ENST00000447986 ARHGAP22Q7Z5H3 698 aa12.67□□□□□ -0.38
ERGIC3-209ENST00000447986 CCDC91Q7Z6B0 441 aa12.67□□□□□ -0.38
ERGIC3-209ENST00000447986 KMT5CQ86Y97 462 aa12.67□□□□□ -0.38
ERGIC3-209ENST00000447986 CEP97Q8IW35 865 aa12.67□□□□□ -0.38
ERGIC3-209ENST00000447986 ADGRF3Q8IZF5 1079 aa12.67□□□□□ -0.38
ERGIC3-209ENST00000447986 OR2L8Q8NGY9 312 aa12.67□□□□□ -0.38
ERGIC3-209ENST00000447986 UHMK1Q8TAS1 419 aaKnown RBP12.67□□□□□ -0.38
ERGIC3-209ENST00000447986 UBLCP1Q8WVY7 318 aaPredicted RBP12.67□□□□□ -0.38
ERGIC3-209ENST00000447986 SLC44A1Q8WWI5 657 aa12.67□□□□□ -0.38
ERGIC3-209ENST00000447986 ANKRD7Q92527 254 aa12.67□□□□□ -0.38
ERGIC3-209ENST00000447986 PAFAH2Q99487 392 aa12.67□□□□□ -0.38
ERGIC3-209ENST00000447986 ZNF768Q9H5H4 540 aaKnown RBP12.67□□□□□ -0.38
ERGIC3-209ENST00000447986 CAB39LQ9H9S4 337 aa12.67□□□□□ -0.38
ERGIC3-209ENST00000447986 C1GALT1Q9NS00 363 aa12.67□□□□□ -0.38
ERGIC3-209ENST00000447986 ACTR10Q9NZ32 417 aa12.67□□□□□ -0.38
ERGIC3-209ENST00000447986 POMT2Q9UKY4 750 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms