RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 SLC39A10Q9ULF5 831 aa11.55□□□□□ -0.56
RFC4-208ENST00000447345 DHRS7Q9Y394 339 aa11.55□□□□□ -0.56
RFC4-208ENST00000447345 PKD1L2Q7Z442 2459 aa11.55□□□□□ -0.56
RFC4-208ENST00000447345 CELSR3Q9NYQ7 3312 aa11.55□□□□□ -0.56
RFC4-208ENST00000447345 HEATR5BQ9P2D3 2071 aa11.55□□□□□ -0.56
RFC4-208ENST00000447345 AHCTF1Q8WYP5 2266 aa11.55□□□□□ -0.56
RFC4-208ENST00000447345 FAM95CA0A1B0GW59 222 aa11.54□□□□□ -0.56
RFC4-208ENST00000447345 SLC9B1P1A6NJY1 282 aa11.54□□□□□ -0.56
RFC4-208ENST00000447345 SRRM3A6NNA2 597 aaPredicted RBP11.54□□□□□ -0.56
RFC4-208ENST00000447345 ARHGEF33A8MVX0 844 aa11.54□□□□□ -0.56
RFC4-208ENST00000447345 ISM1B1AKI9 464 aa11.54□□□□□ -0.56
RFC4-208ENST00000447345 MATN2O00339 956 aa11.54□□□□□ -0.56
RFC4-208ENST00000447345 RASGRF2O14827 1237 aa11.54□□□□□ -0.56
RFC4-208ENST00000447345 MATN4O95460 622 aa11.54□□□□□ -0.56
RFC4-208ENST00000447345 SYF2O95926 243 aaKnown RBP11.54□□□□□ -0.56
RFC4-208ENST00000447345 EBLN1P0CF75 366 aa11.54□□□□□ -0.56
RFC4-208ENST00000447345 UGT2B7P16662 529 aa11.54□□□□□ -0.56
RFC4-208ENST00000447345 PRDX3P30048 256 aaKnown RBP11.54□□□□□ -0.56
RFC4-208ENST00000447345 PEBP1P30086 187 aaKnown RBP11.54□□□□□ -0.56
RFC4-208ENST00000447345 RAB28P51157 221 aa11.54□□□□□ -0.56
RFC4-208ENST00000447345 TIAL1Q01085 375 aaKnown RBP eCLIP11.54□□□□□ -0.56
RFC4-208ENST00000447345 CBLBQ13191 982 aa11.54□□□□□ -0.56
RFC4-208ENST00000447345 ZNF460Q14592 562 aa11.54□□□□□ -0.56
RFC4-208ENST00000447345 KYNUQ16719 465 aa11.54□□□□□ -0.56
RFC4-208ENST00000447345 TEX35Q5T0J7 233 aa11.54□□□□□ -0.56
RFC4-208ENST00000447345 UBAP2Q5T6F2 1119 aaKnown RBP11.54□□□□□ -0.56
RFC4-208ENST00000447345 TMEM164Q5U3C3 297 aa11.54□□□□□ -0.56
RFC4-208ENST00000447345 FAM45BPQ6NSW5 357 aa11.54□□□□□ -0.56
RFC4-208ENST00000447345 UGT3A1Q6NUS8 523 aa11.54□□□□□ -0.56
RFC4-208ENST00000447345 PAQR3Q6TCH7 311 aa11.54□□□□□ -0.56
RFC4-208ENST00000447345 GALNT7Q86SF2 657 aa11.54□□□□□ -0.56
RFC4-208ENST00000447345 CLEC14AQ86T13 490 aa11.54□□□□□ -0.56
RFC4-208ENST00000447345 SLC26A11Q86WA9 606 aa11.54□□□□□ -0.56
RFC4-208ENST00000447345 ZC3HC1Q86WB0 502 aaKnown RBP11.54□□□□□ -0.56
RFC4-208ENST00000447345 ZFAND4Q86XD8 727 aa11.54□□□□□ -0.56
RFC4-208ENST00000447345 FAM20CQ8IXL6 584 aa11.54□□□□□ -0.56
RFC4-208ENST00000447345 PPM1NQ8N819 430 aa11.54□□□□□ -0.56
RFC4-208ENST00000447345 LINC01555Q8NAE3 123 aa11.54□□□□□ -0.56
RFC4-208ENST00000447345 SNIP1Q8TAD8 396 aaKnown RBP11.54□□□□□ -0.56
RFC4-208ENST00000447345 FAM45AQ8TCE6 357 aa11.54□□□□□ -0.56
RFC4-208ENST00000447345 FBF1Q8TES7 1133 aa11.54□□□□□ -0.56
RFC4-208ENST00000447345 UBXN4Q92575 508 aa11.54□□□□□ -0.56
RFC4-208ENST00000447345 RAD51AP1Q96B01 352 aa11.54□□□□□ -0.56
RFC4-208ENST00000447345 LINGO1Q96FE5 620 aa11.54□□□□□ -0.56
RFC4-208ENST00000447345 OR6C1Q96RD1 312 aa11.54□□□□□ -0.56
RFC4-208ENST00000447345 TAAR9Q96RI9 348 aa11.54□□□□□ -0.56
RFC4-208ENST00000447345 CD180Q99467 661 aa11.54□□□□□ -0.56
RFC4-208ENST00000447345 FMO2Q99518 471 aa11.54□□□□□ -0.56
RFC4-208ENST00000447345 MENTQ9BUN1 341 aa11.54□□□□□ -0.56
RFC4-208ENST00000447345 LRRC4CQ9HCJ2 640 aa11.54□□□□□ -0.56
RFC4-208ENST00000447345 NSMCE4AQ9NXX6 385 aa11.54□□□□□ -0.56
RFC4-208ENST00000447345 TXNDC16Q9P2K2 825 aa11.54□□□□□ -0.56
RFC4-208ENST00000447345 B3GALT1Q9Y5Z6 326 aa11.54□□□□□ -0.56
RFC4-208ENST00000447345 DSPP15924 2871 aaKnown RBP11.54□□□□□ -0.56
RFC4-208ENST00000447345 KMT2BQ9UMN6 2715 aaPredicted RBP11.54□□□□□ -0.56
RFC4-208ENST00000447345 MDC1Q14676 2089 aaKnown RBP11.53□□□□□ -0.56
RFC4-208ENST00000447345 FAM159BA6NKW6 160 aa11.53□□□□□ -0.56
RFC4-208ENST00000447345 B4E171 279 aa11.53□□□□□ -0.56
RFC4-208ENST00000447345 TOX3O15405 576 aaPredicted RBP11.53□□□□□ -0.56
RFC4-208ENST00000447345 PSIP1O75475 530 aaKnown RBP11.53□□□□□ -0.56
RFC4-208ENST00000447345 CATP04040 527 aaKnown RBP11.53□□□□□ -0.56
RFC4-208ENST00000447345 GSTA2P09210 222 aa11.53□□□□□ -0.56
RFC4-208ENST00000447345 ENO3P13929 434 aaPredicted RBP11.53□□□□□ -0.56
RFC4-208ENST00000447345 ST6GAL1P15907 406 aa11.53□□□□□ -0.56
RFC4-208ENST00000447345 NELFEP18615 380 aaKnown RBP11.53□□□□□ -0.56
RFC4-208ENST00000447345 CD9P21926 228 aa11.53□□□□□ -0.56
RFC4-208ENST00000447345 FDXRP22570 491 aa11.53□□□□□ -0.56
RFC4-208ENST00000447345 ECHS1P30084 290 aa11.53□□□□□ -0.56
RFC4-208ENST00000447345 STX2P32856 288 aa11.53□□□□□ -0.56
RFC4-208ENST00000447345 CCNFP41002 786 aa11.53□□□□□ -0.56
RFC4-208ENST00000447345 TSPAN7P41732 249 aa11.53□□□□□ -0.56
RFC4-208ENST00000447345 MLLT3P42568 568 aaPredicted RBP11.53□□□□□ -0.56
RFC4-208ENST00000447345 RGS4P49798 205 aa11.53□□□□□ -0.56
RFC4-208ENST00000447345 RAB15P59190 212 aa11.53□□□□□ -0.56
RFC4-208ENST00000447345 MC2RQ01718 297 aa11.53□□□□□ -0.56
RFC4-208ENST00000447345 TUBB3Q13509 450 aa11.53□□□□□ -0.56
RFC4-208ENST00000447345 TSTA3Q13630 321 aaPredicted RBP11.53□□□□□ -0.56
RFC4-208ENST00000447345 KBTBD12Q3ZCT8 623 aa11.53□□□□□ -0.56
RFC4-208ENST00000447345 DCAF12Q5T6F0 453 aa11.53□□□□□ -0.56
RFC4-208ENST00000447345 SPESP1Q6UW49 350 aa11.53□□□□□ -0.56
RFC4-208ENST00000447345 GSPT2Q8IYD1 628 aaKnown RBP11.53□□□□□ -0.56
RFC4-208ENST00000447345 MYO1HQ8N1T3 1032 aa11.53□□□□□ -0.56
RFC4-208ENST00000447345 RAB42Q8N4Z0 105 aa11.53□□□□□ -0.56
RFC4-208ENST00000447345 ZNF248Q8NDW4 579 aa11.53□□□□□ -0.56
RFC4-208ENST00000447345 EEF1AKMT1Q8WVE0 214 aa11.53□□□□□ -0.56
RFC4-208ENST00000447345 KCNE4Q8WWG9 221 aa11.53□□□□□ -0.56
RFC4-208ENST00000447345 KLHL6Q8WZ60 621 aa11.53□□□□□ -0.56
RFC4-208ENST00000447345 MRRFQ96E11 262 aaKnown RBP11.53□□□□□ -0.56
RFC4-208ENST00000447345 VPS39Q96JC1 886 aa11.53□□□□□ -0.56
RFC4-208ENST00000447345 CDC42EP4Q9H3Q1 356 aaKnown RBP11.53□□□□□ -0.56
RFC4-208ENST00000447345 RHOJQ9H4E5 214 aa11.53□□□□□ -0.56
RFC4-208ENST00000447345 ABCF3Q9NUQ8 709 aa11.53□□□□□ -0.56
RFC4-208ENST00000447345 NINJ2Q9NZG7 142 aa11.53□□□□□ -0.56
RFC4-208ENST00000447345 OR6C2Q9NZP2 312 aa11.53□□□□□ -0.56
RFC4-208ENST00000447345 CORO1CQ9ULV4 474 aaPredicted RBP11.53□□□□□ -0.56
RFC4-208ENST00000447345 NFU1Q9UMS0 254 aa11.53□□□□□ -0.56
RFC4-208ENST00000447345 PCDHGA7Q9Y5G6 932 aa11.53□□□□□ -0.56
RFC4-208ENST00000447345 FER1L5A0AVI2 2057 aa11.52□□□□□ -0.57
RFC4-208ENST00000447345 POLR1CO15160 346 aaPredicted RBP11.52□□□□□ -0.57
RFC4-208ENST00000447345 NVLO15381 856 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms