RNA–Protein interactions for RNA: ENST00000444869.5

COMMD3-202, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 757 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-202ENST00000444869 CCNYL3P0C7X3 344 aa13.59□□□□□ -0.23
COMMD3-202ENST00000444869 PRKAR1AP10644 381 aa13.59□□□□□ -0.23
COMMD3-202ENST00000444869 SFTPCP11686 197 aa13.59□□□□□ -0.23
COMMD3-202ENST00000444869 PAMP19021 973 aa13.59□□□□□ -0.23
COMMD3-202ENST00000444869 TCN2P20062 427 aa13.59□□□□□ -0.23
COMMD3-202ENST00000444869 RORAP35398 523 aa13.59□□□□□ -0.23
COMMD3-202ENST00000444869 RAB28P51157 221 aa13.59□□□□□ -0.23
COMMD3-202ENST00000444869 EIF3BP55884 814 aaKnown RBP13.59□□□□□ -0.23
COMMD3-202ENST00000444869 GPS2Q13227 327 aa13.59□□□□□ -0.23
COMMD3-202ENST00000444869 KIR2DS3Q14952 304 aa13.59□□□□□ -0.23
COMMD3-202ENST00000444869 SLC5A12Q1EHB4 618 aa13.59□□□□□ -0.23
COMMD3-202ENST00000444869 ANKRD20A4Q4UJ75 823 aa13.59□□□□□ -0.23
COMMD3-202ENST00000444869 PLEKHS1Q5SXH7 462 aa13.59□□□□□ -0.23
COMMD3-202ENST00000444869 RNASEH2BQ5TBB1 312 aaKnown RBP13.59□□□□□ -0.23
COMMD3-202ENST00000444869 CDHR3Q6ZTQ4 885 aa13.59□□□□□ -0.23
COMMD3-202ENST00000444869 CENPUQ71F23 418 aa13.59□□□□□ -0.23
COMMD3-202ENST00000444869 SDCCAG8Q86SQ7 713 aaPredicted RBP13.59□□□□□ -0.23
COMMD3-202ENST00000444869 TRIM73Q86UV7 250 aa13.59□□□□□ -0.23
COMMD3-202ENST00000444869 CILP2Q8IUL8 1156 aa13.59□□□□□ -0.23
COMMD3-202ENST00000444869 C19orf47Q8N9M1 422 aaKnown RBP13.59□□□□□ -0.23
COMMD3-202ENST00000444869 LINC01555Q8NAE3 123 aa13.59□□□□□ -0.23
COMMD3-202ENST00000444869 SLC38A9Q8NBW4 561 aa13.59□□□□□ -0.23
COMMD3-202ENST00000444869 OR1L3Q8NH93 324 aa13.59□□□□□ -0.23
COMMD3-202ENST00000444869 FAM117AQ9C073 453 aa13.59□□□□□ -0.23
COMMD3-202ENST00000444869 AKIRIN1Q9H9L7 192 aaPredicted RBP13.59□□□□□ -0.23
COMMD3-202ENST00000444869 SAMD15Q9P1V8 674 aa13.59□□□□□ -0.23
COMMD3-202ENST00000444869 TUBD1Q9UJT1 453 aa13.59□□□□□ -0.23
COMMD3-202ENST00000444869 PLAGL1Q9UM63 463 aa13.59□□□□□ -0.23
COMMD3-202ENST00000444869 A0A0J9YY10 115 aa13.58□□□□□ -0.24
COMMD3-202ENST00000444869 B8ZZF3 427 aa13.58□□□□□ -0.24
COMMD3-202ENST00000444869 TMEM150CB9EJG8 249 aa13.58□□□□□ -0.24
COMMD3-202ENST00000444869 H3BMM5 538 aa13.58□□□□□ -0.24
COMMD3-202ENST00000444869 GOLGA8MH3BSY2 632 aa13.58□□□□□ -0.24
COMMD3-202ENST00000444869 PFDN6O15212 129 aa13.58□□□□□ -0.24
COMMD3-202ENST00000444869 NIPSNAP2O75323 286 aa13.58□□□□□ -0.24
COMMD3-202ENST00000444869 USP1O94782 785 aa13.58□□□□□ -0.24
COMMD3-202ENST00000444869 ATP5DP30049 168 aa13.58□□□□□ -0.24
COMMD3-202ENST00000444869 POLE2P56282 527 aa13.58□□□□□ -0.24
COMMD3-202ENST00000444869 DHX34Q14147 1143 aaKnown RBP13.58□□□□□ -0.24
COMMD3-202ENST00000444869 ZIC1Q15915 447 aa13.58□□□□□ -0.24
COMMD3-202ENST00000444869 ATP1A1-AS1Q5TC04 95 aa13.58□□□□□ -0.24
COMMD3-202ENST00000444869 PAPD7Q5XG87 772 aaKnown RBP13.58□□□□□ -0.24
COMMD3-202ENST00000444869 NEPROQ6NW34 567 aa13.58□□□□□ -0.24
COMMD3-202ENST00000444869 CASC4Q6P4E1 433 aa13.58□□□□□ -0.24
COMMD3-202ENST00000444869 OTOAQ7RTW8 1153 aa13.58□□□□□ -0.24
COMMD3-202ENST00000444869 PPIL6Q8IXY8 311 aa13.58□□□□□ -0.24
COMMD3-202ENST00000444869 OTUD6BQ8N6M0 293 aa13.58□□□□□ -0.24
COMMD3-202ENST00000444869 OR2L8Q8NGY9 312 aa13.58□□□□□ -0.24
COMMD3-202ENST00000444869 ZNF669Q96BR6 464 aaPredicted RBP13.58□□□□□ -0.24
COMMD3-202ENST00000444869 TCTN2Q96GX1 697 aa13.58□□□□□ -0.24
COMMD3-202ENST00000444869 SIGLEC10Q96LC7 697 aa13.58□□□□□ -0.24
COMMD3-202ENST00000444869 GPR87Q9BY21 358 aa13.58□□□□□ -0.24
COMMD3-202ENST00000444869 KLHL25Q9H0H3 589 aa13.58□□□□□ -0.24
COMMD3-202ENST00000444869 DDX47Q9H0S4 455 aaKnown RBP13.58□□□□□ -0.24
COMMD3-202ENST00000444869 FAM60AQ9NP50 221 aa13.58□□□□□ -0.24
COMMD3-202ENST00000444869 INTS10Q9NVR2 710 aaKnown RBP13.58□□□□□ -0.24
COMMD3-202ENST00000444869 PCYOX1Q9UHG3 505 aa13.58□□□□□ -0.24
COMMD3-202ENST00000444869 RASGRF2O14827 1237 aa13.57□□□□□ -0.24
COMMD3-202ENST00000444869 MAP3K7O43318 606 aa13.57□□□□□ -0.24
COMMD3-202ENST00000444869 CREG1O75629 220 aa13.57□□□□□ -0.24
COMMD3-202ENST00000444869 S1PR4O95977 384 aa13.57□□□□□ -0.24
COMMD3-202ENST00000444869 FURINP09958 794 aa13.57□□□□□ -0.24
COMMD3-202ENST00000444869 PLA2G2AP14555 144 aa13.57□□□□□ -0.24
COMMD3-202ENST00000444869 CD9P21926 228 aa13.57□□□□□ -0.24
COMMD3-202ENST00000444869 CCR10P46092 362 aa13.57□□□□□ -0.24
COMMD3-202ENST00000444869 ITGA1P56199 1179 aa13.57□□□□□ -0.24
COMMD3-202ENST00000444869 PTK6Q13882 451 aa13.57□□□□□ -0.24
COMMD3-202ENST00000444869 PRAMEF17Q5VTA0 474 aa13.57□□□□□ -0.24
COMMD3-202ENST00000444869 IZUMO3Q5VZ72 239 aa13.57□□□□□ -0.24
COMMD3-202ENST00000444869 ZNF470Q6ECI4 717 aa13.57□□□□□ -0.24
COMMD3-202ENST00000444869 FAM199XQ6PEV8 388 aaPredicted RBP13.57□□□□□ -0.24
COMMD3-202ENST00000444869 LMNTD2Q8IXW0 634 aa13.57□□□□□ -0.24
COMMD3-202ENST00000444869 DSELQ8IZU8 1212 aa13.57□□□□□ -0.24
COMMD3-202ENST00000444869 RUFY1Q96T51 708 aa13.57□□□□□ -0.24
COMMD3-202ENST00000444869 RAB11FIP5Q9BXF6 653 aa13.57□□□□□ -0.24
COMMD3-202ENST00000444869 ACTL8Q9H568 366 aa13.57□□□□□ -0.24
COMMD3-202ENST00000444869 PCMTD2Q9NV79 361 aa13.57□□□□□ -0.24
COMMD3-202ENST00000444869 IL1RAPL1Q9NZN1 696 aa13.57□□□□□ -0.24
COMMD3-202ENST00000444869 VPS9D1Q9Y2B5 631 aa13.57□□□□□ -0.24
COMMD3-202ENST00000444869 BOLA1Q9Y3E2 137 aa13.57□□□□□ -0.24
COMMD3-202ENST00000444869 MRFAP1Q9Y605 127 aa13.57□□□□□ -0.24
COMMD3-202ENST00000444869 NFS1Q9Y697 457 aa13.57□□□□□ -0.24
COMMD3-202ENST00000444869 SPTA1P02549 2419 aa13.56□□□□□ -0.24
COMMD3-202ENST00000444869 MEN1O00255 615 aa13.56□□□□□ -0.24
COMMD3-202ENST00000444869 DNALI1O14645 258 aaPredicted RBP13.56□□□□□ -0.24
COMMD3-202ENST00000444869 HCRTR1O43613 425 aa13.56□□□□□ -0.24
COMMD3-202ENST00000444869 PRICKLE3O43900 615 aaPredicted RBP13.56□□□□□ -0.24
COMMD3-202ENST00000444869 KATNA1O75449 491 aa13.56□□□□□ -0.24
COMMD3-202ENST00000444869 MATN4O95460 622 aa13.56□□□□□ -0.24
COMMD3-202ENST00000444869 C1orf105O95561 183 aa13.56□□□□□ -0.24
COMMD3-202ENST00000444869 PKMP14618 531 aaKnown RBP13.56□□□□□ -0.24
COMMD3-202ENST00000444869 CYP2A7P20853 494 aa13.56□□□□□ -0.24
COMMD3-202ENST00000444869 IVDP26440 423 aa13.56□□□□□ -0.24
COMMD3-202ENST00000444869 PTPN4P29074 926 aa13.56□□□□□ -0.24
COMMD3-202ENST00000444869 FMO4P31512 558 aa13.56□□□□□ -0.24
COMMD3-202ENST00000444869 PTGIRP43119 386 aa13.56□□□□□ -0.24
COMMD3-202ENST00000444869 KCNAB2Q13303 367 aa13.56□□□□□ -0.24
COMMD3-202ENST00000444869 PPP1R7Q15435 360 aa13.56□□□□□ -0.24
COMMD3-202ENST00000444869 ZNF385CQ66K41 422 aaPredicted RBP13.56□□□□□ -0.24
COMMD3-202ENST00000444869 C16orf46Q6P387 395 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms