RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 RDH8Q9NYR8 311 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 COQ3Q9NZJ6 369 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 MPP6Q9NZW5 540 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 FNDC3AQ9Y2H6 1198 aaKnown RBP4.92□□□□□ -1.62
HERC1-201ENST00000443617 MN1Q10571 1320 aaPredicted RBP4.92□□□□□ -1.62
HERC1-201ENST00000443617 CCDC88AQ3V6T2 1871 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 CREG1O75629 220 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 FGF4P08620 206 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 CD86P42081 329 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 RENBPP51606 427 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 SYVN1Q86TM6 617 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 ISCA2Q86U28 154 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 ZDHHC21Q8IVQ6 265 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 SLC34A3Q8N130 599 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 NXF3Q9H4D5 531 aaKnown RBP4.92□□□□□ -1.62
HERC1-201ENST00000443617 AIG1Q9NVV5 245 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 OR5K3A6NET4 321 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 CLCA1A8K7I4 914 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 CCL22O00626 93 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 CD1DP15813 335 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 SLC13A3Q8WWT9 602 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 PABPC5Q96DU9 382 aaKnown RBP4.92□□□□□ -1.62
HERC1-201ENST00000443617 TRPM5Q9NZQ8 1165 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 GNPDA1P46926 289 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 NCF4Q15080 339 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 POU4F3Q15319 338 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 SOWAHCQ53LP3 525 aaPredicted RBP4.92□□□□□ -1.62
HERC1-201ENST00000443617 CYP4Z1Q86W10 505 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 LIX1LQ8IVB5 337 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 ULK4Q96C45 1275 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 ZNF599Q96NL3 588 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 C11orf54Q9H0W9 315 aaPredicted RBP4.92□□□□□ -1.62
HERC1-201ENST00000443617 CRISPLD1Q9H336 500 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 MFSD1Q9H3U5 465 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 C1orf109Q9NX04 203 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 GTF2IRD1Q9UHL9 959 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 FBXW11Q9UKB1 542 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 PLOD3O60568 738 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 KPNA6O60684 536 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 GSTM1P09488 218 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 G6PDP11413 515 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 COL6A1P12109 1028 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 WARSP23381 471 aaKnown RBP4.92□□□□□ -1.62
HERC1-201ENST00000443617 PSMA1P25786 263 aaKnown RBP4.92□□□□□ -1.62
HERC1-201ENST00000443617 MADCAM1Q13477 382 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 PAFAH1B3Q15102 231 aaKnown RBP4.92□□□□□ -1.62
HERC1-201ENST00000443617 PLA2G4EQ3MJ16 856 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 ZNF57Q68EA5 555 aaPredicted RBP4.92□□□□□ -1.62
HERC1-201ENST00000443617 DLEU7Q6UYE1 221 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 SLC46A3Q7Z3Q1 461 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 LRRC71Q8N4P6 559 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 HTATIP2Q9BUP3 242 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 WDCPQ9H6R7 721 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 CATSPERBQ9H7T0 1116 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 MPZL2O60487 215 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 USP17L7P0C7H9 530 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 SLC2A2P11168 524 aaPredicted RBP4.92□□□□□ -1.62
HERC1-201ENST00000443617 EVI2BP34910 448 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 NRG1Q02297 640 aaPredicted RBP4.92□□□□□ -1.62
HERC1-201ENST00000443617 PPP1R8Q12972 351 aaKnown RBP4.92□□□□□ -1.62
HERC1-201ENST00000443617 BTN1A1Q13410 526 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 INO80DQ53TQ3 878 aaPredicted RBP4.92□□□□□ -1.62
HERC1-201ENST00000443617 LDB1Q86U70 411 aaPredicted RBP4.92□□□□□ -1.62
HERC1-201ENST00000443617 DPF3Q92784 378 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 GSTO2Q9H4Y5 243 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 PAK6Q9NQU5 681 aaPredicted RBP4.92□□□□□ -1.62
HERC1-201ENST00000443617 TOPAZ1Q8N9V7 1692 aa4.92□□□□□ -1.62
HERC1-201ENST00000443617 FAM92AA1XBS5 289 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 RETP07949 1114 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 MAPK1P28482 360 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 GZMKP49863 264 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 GPR50Q13585 617 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 CLVS2Q5SYC1 327 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 ATG9BQ674R7 924 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 C8orf82Q6P1X6 216 aaPredicted RBP4.91□□□□□ -1.62
HERC1-201ENST00000443617 ZNF621Q6ZSS3 439 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 GPR149Q86SP6 731 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 L3HYPDHQ96EM0 354 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 TEX37Q96LM6 180 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 OR2A14Q96R47 310 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 FAM105AQ9NUU6 356 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 NPEPPSL1A6NEC2 478 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 ZBTB7AO95365 584 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 RECQLP46063 649 aaPredicted RBP4.91□□□□□ -1.62
HERC1-201ENST00000443617 TCTE3Q8IZS6 198 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 PSKH2Q96QS6 385 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 EVLQ9UI08 416 aaPredicted RBP4.91□□□□□ -1.62
HERC1-201ENST00000443617 PKP3Q9Y446 797 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 GRIK4Q16099 956 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 TAGAPQ8N103 731 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 TP53I13Q8NBR0 393 aaPredicted RBP4.91□□□□□ -1.62
HERC1-201ENST00000443617 GALNT11Q8NCW6 608 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 PRMT6Q96LA8 375 aaPredicted RBP4.91□□□□□ -1.62
HERC1-201ENST00000443617 RNF121Q9H920 327 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 HOXC10Q9NYD6 342 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 MAFBQ9Y5Q3 323 aaPredicted RBP4.91□□□□□ -1.62
HERC1-201ENST00000443617 CLCA3PQ9Y6N3 262 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 STSP08842 583 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 AGTR2P50052 363 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 SLC35F5Q8WV83 523 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms