RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 CHST8Q9H2A9 424 aa18.27■□□□□ 0.52
HMGB3P22-201ENST00000442010 PCMTD2Q9NV79 361 aa18.27■□□□□ 0.52
HMGB3P22-201ENST00000442010 A0A0J9YY10 115 aa18.26■□□□□ 0.51
HMGB3P22-201ENST00000442010 J3QKU1 62 aa18.26■□□□□ 0.51
HMGB3P22-201ENST00000442010 MEN1O00255 615 aa18.26■□□□□ 0.51
HMGB3P22-201ENST00000442010 SUV39H1O43463 412 aa18.26■□□□□ 0.51
HMGB3P22-201ENST00000442010 SLC28A2O43868 658 aa18.26■□□□□ 0.51
HMGB3P22-201ENST00000442010 CAPN1P07384 714 aa18.26■□□□□ 0.51
HMGB3P22-201ENST00000442010 OGNP20774 298 aaKnown RBP18.26■□□□□ 0.51
HMGB3P22-201ENST00000442010 MAGEA3P43357 314 aa18.26■□□□□ 0.51
HMGB3P22-201ENST00000442010 ADARP55265 1226 aaKnown RBP18.26■□□□□ 0.51
HMGB3P22-201ENST00000442010 RPS18P62269 152 aaKnown RBP18.26■□□□□ 0.51
HMGB3P22-201ENST00000442010 GBX1Q14549 363 aa18.26■□□□□ 0.51
HMGB3P22-201ENST00000442010 KIR2DS3Q14952 304 aa18.26■□□□□ 0.51
HMGB3P22-201ENST00000442010 SLC5A12Q1EHB4 618 aa18.26■□□□□ 0.51
HMGB3P22-201ENST00000442010 ZNF385CQ66K41 422 aaPredicted RBP18.26■□□□□ 0.51
HMGB3P22-201ENST00000442010 MRNIPQ6NTE8 343 aa18.26■□□□□ 0.51
HMGB3P22-201ENST00000442010 DCUN1D3Q8IWE4 304 aa18.26■□□□□ 0.51
HMGB3P22-201ENST00000442010 AGGF1Q8N302 714 aaeCLIP18.26■□□□□ 0.51
HMGB3P22-201ENST00000442010 MR1Q95460 341 aa18.26■□□□□ 0.51
HMGB3P22-201ENST00000442010 TCTN2Q96GX1 697 aa18.26■□□□□ 0.51
HMGB3P22-201ENST00000442010 SERPINB12Q96P63 405 aa18.26■□□□□ 0.51
HMGB3P22-201ENST00000442010 TCF12Q99081 682 aa18.26■□□□□ 0.51
HMGB3P22-201ENST00000442010 FAM117AQ9C073 453 aa18.26■□□□□ 0.51
HMGB3P22-201ENST00000442010 SERTAD3Q9UJW9 196 aa18.26■□□□□ 0.51
HMGB3P22-201ENST00000442010 POLHQ9Y253 713 aa18.26■□□□□ 0.51
HMGB3P22-201ENST00000442010 TNRC6AQ8NDV7 1962 aaKnown RBP18.26■□□□□ 0.51
HMGB3P22-201ENST00000442010 FAM237BA0A1B0GVD1 139 aa18.25■□□□□ 0.51
HMGB3P22-201ENST00000442010 CDC14CA4D256 554 aa18.25■□□□□ 0.51
HMGB3P22-201ENST00000442010 CES2O00748 559 aa18.25■□□□□ 0.51
HMGB3P22-201ENST00000442010 ZSCAN12O43309 604 aa18.25■□□□□ 0.51
HMGB3P22-201ENST00000442010 MAP3K7O43318 606 aa18.25■□□□□ 0.51
HMGB3P22-201ENST00000442010 KDM1AO60341 852 aa18.25■□□□□ 0.51
HMGB3P22-201ENST00000442010 PHF2O75151 1096 aa18.25■□□□□ 0.51
HMGB3P22-201ENST00000442010 KLK3P07288 261 aaPredicted RBP18.25■□□□□ 0.51
HMGB3P22-201ENST00000442010 CD9P21926 228 aa18.25■□□□□ 0.51
HMGB3P22-201ENST00000442010 EIF3BP55884 814 aaKnown RBP18.25■□□□□ 0.51
HMGB3P22-201ENST00000442010 ITGA1P56199 1179 aa18.25■□□□□ 0.51
HMGB3P22-201ENST00000442010 TMED2Q15363 201 aa18.25■□□□□ 0.51
HMGB3P22-201ENST00000442010 UGT8Q16880 541 aa18.25■□□□□ 0.51
HMGB3P22-201ENST00000442010 CENPUQ71F23 418 aa18.25■□□□□ 0.51
HMGB3P22-201ENST00000442010 CILP2Q8IUL8 1156 aa18.25■□□□□ 0.51
HMGB3P22-201ENST00000442010 NAT8LQ8N9F0 302 aa18.25■□□□□ 0.51
HMGB3P22-201ENST00000442010 LMNTD1Q8N9Z9 388 aa18.25■□□□□ 0.51
HMGB3P22-201ENST00000442010 CFAP61Q8NHU2 1237 aa18.25■□□□□ 0.51
HMGB3P22-201ENST00000442010 ACTR5Q9H9F9 607 aaPredicted RBP18.25■□□□□ 0.51
HMGB3P22-201ENST00000442010 SNX12Q9UMY4 172 aa18.25■□□□□ 0.51
HMGB3P22-201ENST00000442010 FARSAQ9Y285 508 aaKnown RBP18.25■□□□□ 0.51
HMGB3P22-201ENST00000442010 ZCWPW2A0A1B0GU75 182 aa18.24■□□□□ 0.51
HMGB3P22-201ENST00000442010 SDR42E2A6NKP2 422 aa18.24■□□□□ 0.51
HMGB3P22-201ENST00000442010 ISM1B1AKI9 464 aa18.24■□□□□ 0.51
HMGB3P22-201ENST00000442010 E7EQ34 232 aa18.24■□□□□ 0.51
HMGB3P22-201ENST00000442010 KPNA5O15131 536 aa18.24■□□□□ 0.51
HMGB3P22-201ENST00000442010 ZNF185O15231 689 aa18.24■□□□□ 0.51
HMGB3P22-201ENST00000442010 ZNF749O43361 778 aa18.24■□□□□ 0.51
HMGB3P22-201ENST00000442010 RPN2P04844 631 aa18.24■□□□□ 0.51
HMGB3P22-201ENST00000442010 RAB40ALP0C0E4 278 aa18.24■□□□□ 0.51
HMGB3P22-201ENST00000442010 CYP2A7P20853 494 aa18.24■□□□□ 0.51
HMGB3P22-201ENST00000442010 FMO4P31512 558 aa18.24■□□□□ 0.51
HMGB3P22-201ENST00000442010 FNTAP49354 379 aa18.24■□□□□ 0.51
HMGB3P22-201ENST00000442010 RPS15P62841 145 aaKnown RBP18.24■□□□□ 0.51
HMGB3P22-201ENST00000442010 IL10RAQ13651 578 aa18.24■□□□□ 0.51
HMGB3P22-201ENST00000442010 ANKRD20A4Q4UJ75 823 aa18.24■□□□□ 0.51
HMGB3P22-201ENST00000442010 RNF187Q5TA31 235 aaPredicted RBP18.24■□□□□ 0.51
HMGB3P22-201ENST00000442010 FAM198BQ6UWH4 519 aa18.24■□□□□ 0.51
HMGB3P22-201ENST00000442010 OTOAQ7RTW8 1153 aa18.24■□□□□ 0.51
HMGB3P22-201ENST00000442010 SDCCAG8Q86SQ7 713 aaPredicted RBP18.24■□□□□ 0.51
HMGB3P22-201ENST00000442010 SYVN1Q86TM6 617 aa18.24■□□□□ 0.51
HMGB3P22-201ENST00000442010 FAM20CQ8IXL6 584 aa18.24■□□□□ 0.51
HMGB3P22-201ENST00000442010 DNAJC22Q8N4W6 341 aa18.24■□□□□ 0.51
HMGB3P22-201ENST00000442010 OR2L8Q8NGY9 312 aa18.24■□□□□ 0.51
HMGB3P22-201ENST00000442010 SEC14L1Q92503 715 aa18.24■□□□□ 0.51
HMGB3P22-201ENST00000442010 CLIP3Q96DZ5 547 aa18.24■□□□□ 0.51
HMGB3P22-201ENST00000442010 ABHD17AQ96GS6 310 aa18.24■□□□□ 0.51
HMGB3P22-201ENST00000442010 IL17FQ96PD4 163 aa18.24■□□□□ 0.51
HMGB3P22-201ENST00000442010 XAB2Q9HCS7 855 aaKnown RBP18.24■□□□□ 0.51
HMGB3P22-201ENST00000442010 TRMT1Q9NXH9 659 aaKnown RBP18.24■□□□□ 0.51
HMGB3P22-201ENST00000442010 IL1RAPL1Q9NZN1 696 aa18.24■□□□□ 0.51
HMGB3P22-201ENST00000442010 CIDEBQ9UHD4 219 aa18.24■□□□□ 0.51
HMGB3P22-201ENST00000442010 NFS1Q9Y697 457 aa18.24■□□□□ 0.51
HMGB3P22-201ENST00000442010 PCSK5Q92824 1860 aa18.24■□□□□ 0.51
HMGB3P22-201ENST00000442010 MDC1Q14676 2089 aaKnown RBP18.24■□□□□ 0.51
HMGB3P22-201ENST00000442010 TENM4Q6N022 2769 aa18.24■□□□□ 0.51
HMGB3P22-201ENST00000442010 MAGEB16A2A368 324 aa18.23■□□□□ 0.51
HMGB3P22-201ENST00000442010 GOLGA8MH3BSY2 632 aa18.23■□□□□ 0.51
HMGB3P22-201ENST00000442010 RASGRF2O14827 1237 aa18.23■□□□□ 0.51
HMGB3P22-201ENST00000442010 PRICKLE3O43900 615 aaPredicted RBP18.23■□□□□ 0.51
HMGB3P22-201ENST00000442010 NIPSNAP2O75323 286 aa18.23■□□□□ 0.51
HMGB3P22-201ENST00000442010 C1orf105O95561 183 aa18.23■□□□□ 0.51
HMGB3P22-201ENST00000442010 ESR1P03372 595 aa18.23■□□□□ 0.51
HMGB3P22-201ENST00000442010 CTSBP07858 339 aa18.23■□□□□ 0.51
HMGB3P22-201ENST00000442010 DHX34Q14147 1143 aaKnown RBP18.23■□□□□ 0.51
HMGB3P22-201ENST00000442010 DEFB110Q30KQ9 67 aa18.23■□□□□ 0.51
HMGB3P22-201ENST00000442010 CCSMST1Q4G0I0 132 aa18.23■□□□□ 0.51
HMGB3P22-201ENST00000442010 NEPROQ6NW34 567 aa18.23■□□□□ 0.51
HMGB3P22-201ENST00000442010 PRICKLE2Q7Z3G6 844 aa18.23■□□□□ 0.51
HMGB3P22-201ENST00000442010 HOOK3Q86VS8 718 aa18.23■□□□□ 0.51
HMGB3P22-201ENST00000442010 APLFQ8IW19 511 aaPredicted RBP18.23■□□□□ 0.51
HMGB3P22-201ENST00000442010 SYTL1Q8IYJ3 562 aa18.23■□□□□ 0.51
HMGB3P22-201ENST00000442010 OTUD6BQ8N6M0 293 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms