RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 CELF2-AS1Q8N7Q2 184 aa11.65□□□□□ -0.54
LTBR-203ENST00000441074 SEMA4BQ9NPR2 832 aaPredicted RBP11.65□□□□□ -0.54
LTBR-203ENST00000441074 UTS2RQ9UKP6 389 aa11.65□□□□□ -0.54
LTBR-203ENST00000441074 ERVW-1Q9UQF0 538 aa11.65□□□□□ -0.54
LTBR-203ENST00000441074 TET1Q8NFU7 2136 aa11.65□□□□□ -0.54
LTBR-203ENST00000441074 IRAK2O43187 625 aa11.65□□□□□ -0.54
LTBR-203ENST00000441074 SCELO95171 688 aa11.65□□□□□ -0.54
LTBR-203ENST00000441074 SLC4A1P02730 911 aa11.65□□□□□ -0.54
LTBR-203ENST00000441074 PFKLP17858 780 aa11.65□□□□□ -0.54
LTBR-203ENST00000441074 ALOX12P18054 663 aa11.65□□□□□ -0.54
LTBR-203ENST00000441074 S100A5P33763 92 aa11.65□□□□□ -0.54
LTBR-203ENST00000441074 HTR3AP46098 478 aa11.65□□□□□ -0.54
LTBR-203ENST00000441074 GPR15P49685 360 aa11.65□□□□□ -0.54
LTBR-203ENST00000441074 SERPINH1P50454 418 aaKnown RBP11.65□□□□□ -0.54
LTBR-203ENST00000441074 SUOXP51687 545 aa11.65□□□□□ -0.54
LTBR-203ENST00000441074 ARPP19P56211 112 aa11.65□□□□□ -0.54
LTBR-203ENST00000441074 WNT3AP56704 352 aa11.65□□□□□ -0.54
LTBR-203ENST00000441074 OR2B6P58173 313 aa11.65□□□□□ -0.54
LTBR-203ENST00000441074 TIAL1Q01085 375 aaKnown RBP eCLIP11.65□□□□□ -0.54
LTBR-203ENST00000441074 PPP1R8Q12972 351 aaKnown RBP11.65□□□□□ -0.54
LTBR-203ENST00000441074 GBX1Q14549 363 aa11.65□□□□□ -0.54
LTBR-203ENST00000441074 C6orf136Q5SQH8 315 aa11.65□□□□□ -0.54
LTBR-203ENST00000441074 CAPN13Q6MZZ7 669 aaPredicted RBP11.65□□□□□ -0.54
LTBR-203ENST00000441074 SYTL1Q8IYJ3 562 aa11.65□□□□□ -0.54
LTBR-203ENST00000441074 UBQLNLQ8IYU4 475 aa11.65□□□□□ -0.54
LTBR-203ENST00000441074 MICU2Q8IYU8 434 aa11.65□□□□□ -0.54
LTBR-203ENST00000441074 FBXO39Q8N4B4 442 aa11.65□□□□□ -0.54
LTBR-203ENST00000441074 TTC9BQ8N6N2 239 aa11.65□□□□□ -0.54
LTBR-203ENST00000441074 AMER2Q8N7J2 671 aa11.65□□□□□ -0.54
LTBR-203ENST00000441074 ZNF540Q8NDQ6 660 aa11.65□□□□□ -0.54
LTBR-203ENST00000441074 ZNF548Q8NEK5 533 aaPredicted RBP11.65□□□□□ -0.54
LTBR-203ENST00000441074 OR6P1Q8NGX9 317 aa11.65□□□□□ -0.54
LTBR-203ENST00000441074 OR2T11Q8NH01 316 aa11.65□□□□□ -0.54
LTBR-203ENST00000441074 PDLIM5Q96HC4 596 aaKnown RBP11.65□□□□□ -0.54
LTBR-203ENST00000441074 C6orf62Q9GZU0 229 aaPredicted RBP11.65□□□□□ -0.54
LTBR-203ENST00000441074 MIR1-1HGQ9H1L0 117 aa11.65□□□□□ -0.54
LTBR-203ENST00000441074 SLC25A51Q9H1U9 297 aa11.65□□□□□ -0.54
LTBR-203ENST00000441074 MAGIXQ9H6Y5 334 aa11.65□□□□□ -0.54
LTBR-203ENST00000441074 POPDC3Q9HBV1 291 aa11.65□□□□□ -0.54
LTBR-203ENST00000441074 DDX28Q9NUL7 540 aaKnown RBP11.65□□□□□ -0.54
LTBR-203ENST00000441074 FBXL12Q9NXK8 326 aa11.65□□□□□ -0.54
LTBR-203ENST00000441074 INVSQ9Y283 1065 aa11.65□□□□□ -0.54
LTBR-203ENST00000441074 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.64□□□□□ -0.55
LTBR-203ENST00000441074 CENPXA8MT69 81 aa11.64□□□□□ -0.55
LTBR-203ENST00000441074 RPS17P08708 135 aaKnown RBP11.64□□□□□ -0.55
LTBR-203ENST00000441074 ZNF37AP17032 561 aaPredicted RBP11.64□□□□□ -0.55
LTBR-203ENST00000441074 HOXB6P17509 224 aaKnown RBP11.64□□□□□ -0.55
LTBR-203ENST00000441074 NAT1P18440 290 aa11.64□□□□□ -0.55
LTBR-203ENST00000441074 MSH3P20585 1137 aa11.64□□□□□ -0.55
LTBR-203ENST00000441074 RACK1P63244 317 aaKnown RBP11.64□□□□□ -0.55
LTBR-203ENST00000441074 MRPS15P82914 257 aaKnown RBP11.64□□□□□ -0.55
LTBR-203ENST00000441074 TLE2Q04725 743 aa11.64□□□□□ -0.55
LTBR-203ENST00000441074 YWHAHQ04917 246 aaPredicted RBP11.64□□□□□ -0.55
LTBR-203ENST00000441074 PLA2G4EQ3MJ16 856 aa11.64□□□□□ -0.55
LTBR-203ENST00000441074 ZFP69Q49AA0 526 aa11.64□□□□□ -0.55
LTBR-203ENST00000441074 SLC39A12Q504Y0 691 aa11.64□□□□□ -0.55
LTBR-203ENST00000441074 AFMIDQ63HM1 303 aa11.64□□□□□ -0.55
LTBR-203ENST00000441074 KDELC1Q6UW63 502 aa11.64□□□□□ -0.55
LTBR-203ENST00000441074 SPATC1Q76KD6 591 aa11.64□□□□□ -0.55
LTBR-203ENST00000441074 SYVN1Q86TM6 617 aa11.64□□□□□ -0.55
LTBR-203ENST00000441074 C11orf74Q86VG3 221 aa11.64□□□□□ -0.55
LTBR-203ENST00000441074 FNDC5Q8NAU1 212 aa11.64□□□□□ -0.55
LTBR-203ENST00000441074 IPCEF1Q8WWN9 437 aaPredicted RBP11.64□□□□□ -0.55
LTBR-203ENST00000441074 FATE1Q969F0 183 aa11.64□□□□□ -0.55
LTBR-203ENST00000441074 DEPDC7Q96QD5 511 aa11.64□□□□□ -0.55
LTBR-203ENST00000441074 ITPAQ9BY32 194 aa11.64□□□□□ -0.55
LTBR-203ENST00000441074 GPR62Q9BZJ7 368 aa11.64□□□□□ -0.55
LTBR-203ENST00000441074 SLC39A8Q9C0K1 460 aa11.64□□□□□ -0.55
LTBR-203ENST00000441074 ZBTB20Q9HC78 741 aaPredicted RBP11.64□□□□□ -0.55
LTBR-203ENST00000441074 ATP13A1Q9HD20 1204 aa11.64□□□□□ -0.55
LTBR-203ENST00000441074 MARCH4Q9P2E8 410 aaPredicted RBP11.64□□□□□ -0.55
LTBR-203ENST00000441074 CRYL1Q9Y2S2 319 aa11.64□□□□□ -0.55
LTBR-203ENST00000441074 NEUROG3Q9Y4Z2 214 aa11.64□□□□□ -0.55
LTBR-203ENST00000441074 SUPT3HB4E1H0 165 aa11.64□□□□□ -0.55
LTBR-203ENST00000441074 AIREO43918 545 aa11.64□□□□□ -0.55
LTBR-203ENST00000441074 KERAO60938 352 aa11.64□□□□□ -0.55
LTBR-203ENST00000441074 MITFO75030 526 aaPredicted RBP11.64□□□□□ -0.55
LTBR-203ENST00000441074 MED26O95402 600 aa11.64□□□□□ -0.55
LTBR-203ENST00000441074 KRT6AP02538 564 aa11.64□□□□□ -0.55
LTBR-203ENST00000441074 KRT6BP04259 564 aa11.64□□□□□ -0.55
LTBR-203ENST00000441074 ABCB1P08183 1280 aaPredicted RBP11.64□□□□□ -0.55
LTBR-203ENST00000441074 IGFBP5P24593 272 aa11.64□□□□□ -0.55
LTBR-203ENST00000441074 CLK3P49761 638 aaKnown RBP11.64□□□□□ -0.55
LTBR-203ENST00000441074 FAM189BP81408 668 aa11.64□□□□□ -0.55
LTBR-203ENST00000441074 DSC1Q08554 894 aa11.64□□□□□ -0.55
LTBR-203ENST00000441074 EIF4EBP2Q13542 120 aaPredicted RBP11.64□□□□□ -0.55
LTBR-203ENST00000441074 ZCCHC8Q6NZY4 707 aaKnown RBP11.64□□□□□ -0.55
LTBR-203ENST00000441074 ZNF549Q6P9A3 640 aa11.64□□□□□ -0.55
LTBR-203ENST00000441074 SCIMPQ6UWF3 145 aa11.64□□□□□ -0.55
LTBR-203ENST00000441074 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.64□□□□□ -0.55
LTBR-203ENST00000441074 RFPL4BQ6ZWI9 263 aa11.64□□□□□ -0.55
LTBR-203ENST00000441074 TAS1R1Q7RTX1 841 aa11.64□□□□□ -0.55
LTBR-203ENST00000441074 ANGPTL6Q8NI99 470 aa11.64□□□□□ -0.55
LTBR-203ENST00000441074 TRIM63Q969Q1 353 aa11.64□□□□□ -0.55
LTBR-203ENST00000441074 FAM162AQ96A26 154 aa11.64□□□□□ -0.55
LTBR-203ENST00000441074 KIAA1191Q96A73 305 aa11.64□□□□□ -0.55
LTBR-203ENST00000441074 PYCR2Q96C36 320 aa11.64□□□□□ -0.55
LTBR-203ENST00000441074 ITCHQ96J02 903 aa11.64□□□□□ -0.55
LTBR-203ENST00000441074 HEBP1Q9NRV9 189 aa11.64□□□□□ -0.55
LTBR-203ENST00000441074 OSER1Q9NX31 292 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms