RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 SH3BGRLO75368 114 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 TNFRSF1BP20333 461 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 GRIK1P39086 918 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 SLC19A1P41440 591 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 CDKN2CP42773 168 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 GPLD1P80108 840 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 CDC20Q12834 499 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 ALKAL1Q6UXT8 129 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 PIANPQ8IYJ0 282 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 LINC01465Q8N7H1 131 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 OR4K2Q8NGD2 314 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 KCTD13Q8WZ19 329 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 REXO5Q96IC2 774 aaKnown RBP13.1□□□□□ -0.31
ACTN1-204ENST00000438964 OR52E6Q96RD3 313 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 COPS4Q9BT78 406 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 TTPALQ9BTX7 342 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 DUSP21Q9H596 190 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 EXOSC4Q9NPD3 245 aaKnown RBP13.1□□□□□ -0.31
ACTN1-204ENST00000438964 USE1Q9NZ43 259 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 NAALAD2Q9Y3Q0 740 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 TSC2P49815 1807 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 CENPXA8MT69 81 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 LOC110117498-PIK3R3F6TDL0 507 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 ERVH48-1M5A8F1 160 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 WBP4O75554 376 aaKnown RBP13.1□□□□□ -0.31
ACTN1-204ENST00000438964 HPRP00739 348 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 RPS17P08708 135 aaKnown RBP13.1□□□□□ -0.31
ACTN1-204ENST00000438964 COL6A1P12109 1028 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 POU2F1P14859 743 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 ACVRL1P37023 503 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 HSPA7P48741 367 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 TOP3AQ13472 1001 aaPredicted RBP13.1□□□□□ -0.31
ACTN1-204ENST00000438964 ACOX1Q15067 660 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 COQ5Q5HYK3 327 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 CPZQ66K79 652 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 CHPFQ8IZ52 775 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 EFHBQ8N7U6 833 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 UBASH3BQ8TF42 649 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 KIAA1191Q96A73 305 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 IMP4Q96G21 291 aaKnown RBP13.1□□□□□ -0.31
ACTN1-204ENST00000438964 AARSD1Q9BTE6 412 aaKnown RBP13.1□□□□□ -0.31
ACTN1-204ENST00000438964 SLC25A51Q9H1U9 297 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 TIGARQ9NQ88 270 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 RAD18Q9NS91 495 aa13.1□□□□□ -0.31
ACTN1-204ENST00000438964 NUFIP1Q9UHK0 495 aaKnown RBP13.1□□□□□ -0.31
ACTN1-204ENST00000438964 OR2A25A4D2G3 310 aa13.09□□□□□ -0.31
ACTN1-204ENST00000438964 H3BM21 787 aa13.09□□□□□ -0.31
ACTN1-204ENST00000438964 E2F3O00716 465 aa13.09□□□□□ -0.31
ACTN1-204ENST00000438964 PTGESO14684 152 aa13.09□□□□□ -0.31
ACTN1-204ENST00000438964 NBNO60934 754 aa13.09□□□□□ -0.31
ACTN1-204ENST00000438964 STSP08842 583 aa13.09□□□□□ -0.31
ACTN1-204ENST00000438964 BMP1P13497 986 aa13.09□□□□□ -0.31
ACTN1-204ENST00000438964 HTR3AP46098 478 aa13.09□□□□□ -0.31
ACTN1-204ENST00000438964 VLDLRP98155 873 aa13.09□□□□□ -0.31
ACTN1-204ENST00000438964 RAD51Q06609 339 aa13.09□□□□□ -0.31
ACTN1-204ENST00000438964 LRRC26Q2I0M4 334 aa13.09□□□□□ -0.31
ACTN1-204ENST00000438964 MRNIPQ6NTE8 343 aa13.09□□□□□ -0.31
ACTN1-204ENST00000438964 GPSM1Q86YR5 675 aa13.09□□□□□ -0.31
ACTN1-204ENST00000438964 MIB1Q86YT6 1006 aa13.09□□□□□ -0.31
ACTN1-204ENST00000438964 OR56A4Q8NGH8 313 aa13.09□□□□□ -0.31
ACTN1-204ENST00000438964 VANGL1Q8TAA9 524 aaPredicted RBP13.09□□□□□ -0.31
ACTN1-204ENST00000438964 RMDN1Q96DB5 314 aa13.09□□□□□ -0.31
ACTN1-204ENST00000438964 TSSK3Q96PN8 268 aa13.09□□□□□ -0.31
ACTN1-204ENST00000438964 TRNT1Q96Q11 434 aaKnown RBP13.09□□□□□ -0.31
ACTN1-204ENST00000438964 KRT84Q9NSB2 600 aa13.09□□□□□ -0.31
ACTN1-204ENST00000438964 WBP11Q9Y2W2 641 aaKnown RBP13.09□□□□□ -0.31
ACTN1-204ENST00000438964 SAMHD1Q9Y3Z3 626 aaKnown RBP13.09□□□□□ -0.31
ACTN1-204ENST00000438964 IPPQ9Y573 584 aa13.09□□□□□ -0.31
ACTN1-204ENST00000438964 HHLA1C9JL84 531 aa13.09□□□□□ -0.31
ACTN1-204ENST00000438964 SMLR1H3BR10 107 aa13.09□□□□□ -0.31
ACTN1-204ENST00000438964 ONECUT3O60422 494 aaPredicted RBP13.09□□□□□ -0.31
ACTN1-204ENST00000438964 NDUFS3O75489 264 aa13.09□□□□□ -0.31
ACTN1-204ENST00000438964 F9P00740 461 aa13.09□□□□□ -0.31
ACTN1-204ENST00000438964 ATXN1LP0C7T5 689 aaKnown RBP13.09□□□□□ -0.31
ACTN1-204ENST00000438964 ACVR2AP27037 513 aa13.09□□□□□ -0.31
ACTN1-204ENST00000438964 HOXA9P31269 272 aa13.09□□□□□ -0.31
ACTN1-204ENST00000438964 BRCC3P46736 316 aa13.09□□□□□ -0.31
ACTN1-204ENST00000438964 RPP38P78345 283 aaKnown RBP13.09□□□□□ -0.31
ACTN1-204ENST00000438964 NKX3-2P78367 333 aa13.09□□□□□ -0.31
ACTN1-204ENST00000438964 MAD2L1BPQ15013 274 aaPredicted RBP13.09□□□□□ -0.31
ACTN1-204ENST00000438964 FAM171A1Q5VUB5 890 aa13.09□□□□□ -0.31
ACTN1-204ENST00000438964 PSAPL1Q6NUJ1 521 aa13.09□□□□□ -0.31
ACTN1-204ENST00000438964 MBOAT1Q6ZNC8 495 aa13.09□□□□□ -0.31
ACTN1-204ENST00000438964 NLRP8Q86W28 1048 aa13.09□□□□□ -0.31
ACTN1-204ENST00000438964 P3H2Q8IVL5 708 aa13.09□□□□□ -0.31
ACTN1-204ENST00000438964 CYP4Z2PQ8N1L4 340 aa13.09□□□□□ -0.31
ACTN1-204ENST00000438964 ITPAQ9BY32 194 aa13.09□□□□□ -0.31
ACTN1-204ENST00000438964 TAS2R13Q9NYV9 303 aa13.09□□□□□ -0.31
ACTN1-204ENST00000438964 ZIM2Q9NZV7 527 aa13.09□□□□□ -0.31
ACTN1-204ENST00000438964 COL1A2P08123 1366 aa13.09□□□□□ -0.31
ACTN1-204ENST00000438964 TYW5A2RUC4 315 aaKnown RBP13.08□□□□□ -0.32
ACTN1-204ENST00000438964 MROH6A6NGR9 719 aa13.08□□□□□ -0.32
ACTN1-204ENST00000438964 SEC22BO75396 215 aa13.08□□□□□ -0.32
ACTN1-204ENST00000438964 SCO1O75880 301 aa13.08□□□□□ -0.32
ACTN1-204ENST00000438964 DNAJB2P25686 324 aa13.08□□□□□ -0.32
ACTN1-204ENST00000438964 SSTR4P31391 388 aa13.08□□□□□ -0.32
ACTN1-204ENST00000438964 SLC26A2P50443 739 aa13.08□□□□□ -0.32
ACTN1-204ENST00000438964 MXD1Q05195 221 aa13.08□□□□□ -0.32
ACTN1-204ENST00000438964 SMARCB1Q12824 385 aa13.08□□□□□ -0.32
ACTN1-204ENST00000438964 DOC2BQ14184 412 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms