RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 PLAGL1Q9UM63 463 aa23.93■■□□□ 1.42
RAPGEF1-206ENST00000438647 SMG1Q96Q15 3661 aaKnown RBP23.92■■□□□ 1.42
RAPGEF1-206ENST00000438647 TK2O00142 265 aa23.92■■□□□ 1.42
RAPGEF1-206ENST00000438647 SEC31AO94979 1220 aaKnown RBP23.92■■□□□ 1.42
RAPGEF1-206ENST00000438647 TPBGLP0DKB5 382 aa23.92■■□□□ 1.42
RAPGEF1-206ENST00000438647 UGT2B7P16662 529 aa23.92■■□□□ 1.42
RAPGEF1-206ENST00000438647 GPR19Q15760 415 aa23.92■■□□□ 1.42
RAPGEF1-206ENST00000438647 ZNF789Q5FWF6 425 aa23.92■■□□□ 1.42
RAPGEF1-206ENST00000438647 KIAA1614Q5VZ46 1190 aa23.92■■□□□ 1.42
RAPGEF1-206ENST00000438647 HIBCHQ6NVY1 386 aaPredicted RBP23.92■■□□□ 1.42
RAPGEF1-206ENST00000438647 KCNJ9Q92806 393 aa23.92■■□□□ 1.42
RAPGEF1-206ENST00000438647 SLC22A18Q96BI1 424 aa23.92■■□□□ 1.42
RAPGEF1-206ENST00000438647 LRRC39Q96DD0 335 aa23.92■■□□□ 1.42
RAPGEF1-206ENST00000438647 SLC45A3Q96JT2 553 aa23.92■■□□□ 1.42
RAPGEF1-206ENST00000438647 OR2A14Q96R47 310 aa23.92■■□□□ 1.42
RAPGEF1-206ENST00000438647 KLHL42Q9P2K6 505 aa23.92■■□□□ 1.42
RAPGEF1-206ENST00000438647 FBXO5Q9UKT4 447 aa23.92■■□□□ 1.42
RAPGEF1-206ENST00000438647 A0A0J9YY10 115 aa23.91■■□□□ 1.42
RAPGEF1-206ENST00000438647 LOC101059948A0A1B0GTJ6 334 aa23.91■■□□□ 1.42
RAPGEF1-206ENST00000438647 ZNF891A8MT65 544 aaPredicted RBP23.91■■□□□ 1.42
RAPGEF1-206ENST00000438647 EFCAB8A8MWE9 144 aa23.91■■□□□ 1.42
RAPGEF1-206ENST00000438647 ISM1B1AKI9 464 aa23.91■■□□□ 1.42
RAPGEF1-206ENST00000438647 ITGB2P05107 769 aa23.91■■□□□ 1.42
RAPGEF1-206ENST00000438647 WT1P19544 449 aaPredicted RBP23.91■■□□□ 1.42
RAPGEF1-206ENST00000438647 CD9P21926 228 aa23.91■■□□□ 1.42
RAPGEF1-206ENST00000438647 GBX1Q14549 363 aa23.91■■□□□ 1.42
RAPGEF1-206ENST00000438647 HIF1AQ16665 826 aa23.91■■□□□ 1.42
RAPGEF1-206ENST00000438647 SLC5A12Q1EHB4 618 aa23.91■■□□□ 1.42
RAPGEF1-206ENST00000438647 TMEM126BQ8IUX1 230 aa23.91■■□□□ 1.42
RAPGEF1-206ENST00000438647 C17orf53Q8N3J3 647 aaPredicted RBP23.91■■□□□ 1.42
RAPGEF1-206ENST00000438647 TTC9Q92623 222 aa23.91■■□□□ 1.42
RAPGEF1-206ENST00000438647 FAM136AQ96C01 138 aa23.91■■□□□ 1.42
RAPGEF1-206ENST00000438647 BBC3Q96PG8 261 aaPredicted RBP23.91■■□□□ 1.42
RAPGEF1-206ENST00000438647 TWSG1Q9GZX9 223 aa23.91■■□□□ 1.42
RAPGEF1-206ENST00000438647 IARS2Q9NSE4 1012 aaKnown RBP23.91■■□□□ 1.42
RAPGEF1-206ENST00000438647 SPHK1Q9NYA1 384 aa23.91■■□□□ 1.42
RAPGEF1-206ENST00000438647 PADI1Q9ULC6 663 aa23.91■■□□□ 1.42
RAPGEF1-206ENST00000438647 RASGRF2O14827 1237 aa23.9■■□□□ 1.42
RAPGEF1-206ENST00000438647 CPNE3O75131 537 aaKnown RBP23.9■■□□□ 1.42
RAPGEF1-206ENST00000438647 SCRG1O75711 98 aa23.9■■□□□ 1.42
RAPGEF1-206ENST00000438647 TIAF1O95411 115 aa23.9■■□□□ 1.42
RAPGEF1-206ENST00000438647 C1orf105O95561 183 aa23.9■■□□□ 1.42
RAPGEF1-206ENST00000438647 ITGA8P53708 1063 aa23.9■■□□□ 1.42
RAPGEF1-206ENST00000438647 ARL4CP56559 192 aa23.9■■□□□ 1.42
RAPGEF1-206ENST00000438647 MSS51Q4VC12 460 aa23.9■■□□□ 1.42
RAPGEF1-206ENST00000438647 CNSTQ6PJW8 725 aa23.9■■□□□ 1.42
RAPGEF1-206ENST00000438647 SYT10Q6XYQ8 523 aa23.9■■□□□ 1.42
RAPGEF1-206ENST00000438647 MAATS1Q7Z4T9 603 aa23.9■■□□□ 1.42
RAPGEF1-206ENST00000438647 UNC5BQ8IZJ1 945 aa23.9■■□□□ 1.42
RAPGEF1-206ENST00000438647 C19orf47Q8N9M1 422 aaKnown RBP23.9■■□□□ 1.42
RAPGEF1-206ENST00000438647 BBOF1Q8ND07 529 aa23.9■■□□□ 1.42
RAPGEF1-206ENST00000438647 SPATA4Q8NEY3 305 aa23.9■■□□□ 1.42
RAPGEF1-206ENST00000438647 SLC39A7Q92504 469 aa23.9■■□□□ 1.42
RAPGEF1-206ENST00000438647 TCTN2Q96GX1 697 aa23.9■■□□□ 1.42
RAPGEF1-206ENST00000438647 MENTQ9BUN1 341 aa23.9■■□□□ 1.42
RAPGEF1-206ENST00000438647 TRIM31Q9BZY9 425 aa23.9■■□□□ 1.42
RAPGEF1-206ENST00000438647 CHRNA10Q9GZZ6 450 aa23.9■■□□□ 1.42
RAPGEF1-206ENST00000438647 ATMQ13315 3056 aa23.89■■□□□ 1.42
RAPGEF1-206ENST00000438647 BANF1O75531 89 aa23.89■■□□□ 1.41
RAPGEF1-206ENST00000438647 PVRP15151 417 aa23.89■■□□□ 1.41
RAPGEF1-206ENST00000438647 CLCN7P51798 805 aa23.89■■□□□ 1.41
RAPGEF1-206ENST00000438647 MC1RQ01726 317 aa23.89■■□□□ 1.41
RAPGEF1-206ENST00000438647 GRB7Q14451 532 aa23.89■■□□□ 1.41
RAPGEF1-206ENST00000438647 C2CD4AQ8NCU7 369 aaPredicted RBP23.89■■□□□ 1.41
RAPGEF1-206ENST00000438647 OR2L8Q8NGY9 312 aa23.89■■□□□ 1.41
RAPGEF1-206ENST00000438647 N4BP2L2Q92802 583 aaPredicted RBP23.89■■□□□ 1.41
RAPGEF1-206ENST00000438647 SLC12A9Q9BXP2 914 aa23.89■■□□□ 1.41
RAPGEF1-206ENST00000438647 KLHL25Q9H0H3 589 aa23.89■■□□□ 1.41
RAPGEF1-206ENST00000438647 ZC3H7BQ9UGR2 993 aaKnown RBP23.89■■□□□ 1.41
RAPGEF1-206ENST00000438647 SERTAD3Q9UJW9 196 aa23.89■■□□□ 1.41
RAPGEF1-206ENST00000438647 KCND3Q9UK17 655 aa23.89■■□□□ 1.41
RAPGEF1-206ENST00000438647 PCDHB3Q9Y5E6 796 aa23.89■■□□□ 1.41
RAPGEF1-206ENST00000438647 NFS1Q9Y697 457 aa23.89■■□□□ 1.41
RAPGEF1-206ENST00000438647 FAM187AA6NFU0 413 aa23.88■■□□□ 1.41
RAPGEF1-206ENST00000438647 TMEM150CB9EJG8 249 aa23.88■■□□□ 1.41
RAPGEF1-206ENST00000438647 MATN4O95460 622 aa23.88■■□□□ 1.41
RAPGEF1-206ENST00000438647 ERVK-10P10266 1014 aa23.88■■□□□ 1.41
RAPGEF1-206ENST00000438647 DLSTP36957 453 aa23.88■■□□□ 1.41
RAPGEF1-206ENST00000438647 MPP1Q00013 466 aa23.88■■□□□ 1.41
RAPGEF1-206ENST00000438647 ACSBG2Q5FVE4 666 aa23.88■■□□□ 1.41
RAPGEF1-206ENST00000438647 KIAA0408Q6ZU52 694 aa23.88■■□□□ 1.41
RAPGEF1-206ENST00000438647 NEK10Q6ZWH5 1172 aa23.88■■□□□ 1.41
RAPGEF1-206ENST00000438647 TRIM73Q86UV7 250 aa23.88■■□□□ 1.41
RAPGEF1-206ENST00000438647 LINC01555Q8NAE3 123 aa23.88■■□□□ 1.41
RAPGEF1-206ENST00000438647 FLVCR1-AS1Q8TAF5 88 aa23.88■■□□□ 1.41
RAPGEF1-206ENST00000438647 RNF31Q96EP0 1072 aa23.88■■□□□ 1.41
RAPGEF1-206ENST00000438647 CERS2Q96G23 380 aa23.88■■□□□ 1.41
RAPGEF1-206ENST00000438647 LHX9Q9NQ69 397 aa23.88■■□□□ 1.41
RAPGEF1-206ENST00000438647 FAM114A2Q9NRY5 505 aa23.88■■□□□ 1.41
RAPGEF1-206ENST00000438647 CROTQ9UKG9 612 aa23.88■■□□□ 1.41
RAPGEF1-206ENST00000438647 RUVBL2Q9Y230 463 aaKnown RBP23.88■■□□□ 1.41
RAPGEF1-206ENST00000438647 HAUS5O94927 633 aa23.87■■□□□ 1.41
RAPGEF1-206ENST00000438647 NTRK1P04629 796 aa23.87■■□□□ 1.41
RAPGEF1-206ENST00000438647 ENO3P13929 434 aaPredicted RBP23.87■■□□□ 1.41
RAPGEF1-206ENST00000438647 CYP2A7P20853 494 aa23.87■■□□□ 1.41
RAPGEF1-206ENST00000438647 PEBP1P30086 187 aaKnown RBP23.87■■□□□ 1.41
RAPGEF1-206ENST00000438647 ELK3P41970 407 aa23.87■■□□□ 1.41
RAPGEF1-206ENST00000438647 BDKRB1P46663 353 aa23.87■■□□□ 1.41
RAPGEF1-206ENST00000438647 KLHL38Q2WGJ6 581 aa23.87■■□□□ 1.41
RAPGEF1-206ENST00000438647 ZNF549Q6P9A3 640 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms