RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 BRMS1LQ5PSV4 323 aa11.31□□□□□ -0.6
HMGCS1-202ENST00000433297 DLK2Q6UY11 383 aa11.31□□□□□ -0.6
HMGCS1-202ENST00000433297 CCDC117Q8IWD4 279 aaPredicted RBP11.31□□□□□ -0.6
HMGCS1-202ENST00000433297 SLC38A6Q8IZM9 456 aa11.31□□□□□ -0.6
HMGCS1-202ENST00000433297 TP53I13Q8NBR0 393 aaPredicted RBP11.31□□□□□ -0.6
HMGCS1-202ENST00000433297 JPH3Q8WXH2 748 aaPredicted RBP11.31□□□□□ -0.6
HMGCS1-202ENST00000433297 GTF2H4Q92759 462 aa11.31□□□□□ -0.6
HMGCS1-202ENST00000433297 AARSD1Q9BTE6 412 aaKnown RBP11.31□□□□□ -0.6
HMGCS1-202ENST00000433297 NUSAP1Q9BXS6 441 aaKnown RBP11.31□□□□□ -0.6
HMGCS1-202ENST00000433297 RANGRFQ9HD47 186 aaPredicted RBP11.31□□□□□ -0.6
HMGCS1-202ENST00000433297 CCNB1IP1Q9NPC3 277 aa11.31□□□□□ -0.6
HMGCS1-202ENST00000433297 SLC6A13Q9NSD5 602 aa11.31□□□□□ -0.6
HMGCS1-202ENST00000433297 SLC25A37Q9NYZ2 338 aa11.31□□□□□ -0.6
HMGCS1-202ENST00000433297 NUFIP1Q9UHK0 495 aaKnown RBP11.31□□□□□ -0.6
HMGCS1-202ENST00000433297 APBA3O96018 575 aa11.31□□□□□ -0.6
HMGCS1-202ENST00000433297 RPS17P08708 135 aaKnown RBP11.31□□□□□ -0.6
HMGCS1-202ENST00000433297 HTR2BP41595 481 aa11.31□□□□□ -0.6
HMGCS1-202ENST00000433297 IDH2P48735 452 aaKnown RBP11.31□□□□□ -0.6
HMGCS1-202ENST00000433297 CRISP3P54108 245 aa11.31□□□□□ -0.6
HMGCS1-202ENST00000433297 CHRNEQ04844 493 aa11.31□□□□□ -0.6
HMGCS1-202ENST00000433297 ZNF438Q7Z4V0 828 aa11.31□□□□□ -0.6
HMGCS1-202ENST00000433297 RAB43Q86YS6 212 aa11.31□□□□□ -0.6
HMGCS1-202ENST00000433297 TRIM48Q8IWZ4 208 aa11.31□□□□□ -0.6
HMGCS1-202ENST00000433297 UBQLNLQ8IYU4 475 aa11.31□□□□□ -0.6
HMGCS1-202ENST00000433297 EEF1AKMT1Q8WVE0 214 aa11.31□□□□□ -0.6
HMGCS1-202ENST00000433297 PSMG2Q969U7 264 aa11.31□□□□□ -0.6
HMGCS1-202ENST00000433297 CYP2S1Q96SQ9 504 aa11.31□□□□□ -0.6
HMGCS1-202ENST00000433297 TSEN34Q9BSV6 310 aaKnown RBP11.31□□□□□ -0.6
HMGCS1-202ENST00000433297 RAPGEFL1Q9UHV5 662 aa11.31□□□□□ -0.6
HMGCS1-202ENST00000433297 M0R082 166 aa11.3□□□□□ -0.6
HMGCS1-202ENST00000433297 B3GALT4O96024 378 aa11.3□□□□□ -0.6
HMGCS1-202ENST00000433297 HAPLN1P10915 354 aaPredicted RBP11.3□□□□□ -0.6
HMGCS1-202ENST00000433297 CDKN1CP49918 316 aaPredicted RBP11.3□□□□□ -0.6
HMGCS1-202ENST00000433297 P2RX3P56373 397 aa11.3□□□□□ -0.6
HMGCS1-202ENST00000433297 SLAMF1Q13291 335 aa11.3□□□□□ -0.6
HMGCS1-202ENST00000433297 ST6GAL2Q96JF0 529 aa11.3□□□□□ -0.6
HMGCS1-202ENST00000433297 KCNC2Q96PR1 638 aa11.3□□□□□ -0.6
HMGCS1-202ENST00000433297 RUBCNLQ9H714 662 aa11.3□□□□□ -0.6
HMGCS1-202ENST00000433297 ZNF451Q9Y4E5 1061 aa11.3□□□□□ -0.6
HMGCS1-202ENST00000433297 PNMA8CA0A1B0GUJ8 204 aa11.3□□□□□ -0.6
HMGCS1-202ENST00000433297 NIPSNAP2O75323 286 aa11.3□□□□□ -0.6
HMGCS1-202ENST00000433297 GPLD1P80108 840 aa11.3□□□□□ -0.6
HMGCS1-202ENST00000433297 GRIK4Q16099 956 aa11.3□□□□□ -0.6
HMGCS1-202ENST00000433297 TYSND1Q2T9J0 566 aa11.3□□□□□ -0.6
HMGCS1-202ENST00000433297 VTCN1Q7Z7D3 282 aa11.3□□□□□ -0.6
HMGCS1-202ENST00000433297 OR4F6Q8NGB9 312 aa11.3□□□□□ -0.6
HMGCS1-202ENST00000433297 HMCESQ96FZ2 354 aa11.3□□□□□ -0.6
HMGCS1-202ENST00000433297 IMP4Q96G21 291 aaKnown RBP11.3□□□□□ -0.6
HMGCS1-202ENST00000433297 SENP8Q96LD8 212 aa11.3□□□□□ -0.6
HMGCS1-202ENST00000433297 PRM3Q9NNZ6 103 aa11.3□□□□□ -0.6
HMGCS1-202ENST00000433297 TIGARQ9NQ88 270 aa11.3□□□□□ -0.6
HMGCS1-202ENST00000433297 PEX16Q9Y5Y5 336 aa11.3□□□□□ -0.6
HMGCS1-202ENST00000433297 IQCF5A8MTL0 148 aa11.3□□□□□ -0.6
HMGCS1-202ENST00000433297 GABRDO14764 452 aa11.3□□□□□ -0.6
HMGCS1-202ENST00000433297 SEC22BO75396 215 aa11.3□□□□□ -0.6
HMGCS1-202ENST00000433297 PGRP06401 933 aa11.3□□□□□ -0.6
HMGCS1-202ENST00000433297 ITGAMP11215 1152 aa11.3□□□□□ -0.6
HMGCS1-202ENST00000433297 SOX6P35712 828 aa11.3□□□□□ -0.6
HMGCS1-202ENST00000433297 FADDQ13158 208 aa11.3□□□□□ -0.6
HMGCS1-202ENST00000433297 STARD3Q14849 445 aa11.3□□□□□ -0.6
HMGCS1-202ENST00000433297 ARMCX4Q5H9R4 360 aa11.3□□□□□ -0.6
HMGCS1-202ENST00000433297 OR2T5Q6IEZ7 315 aa11.3□□□□□ -0.6
HMGCS1-202ENST00000433297 ERAP2Q6P179 960 aa11.3□□□□□ -0.6
HMGCS1-202ENST00000433297 SHQ1Q6PI26 577 aaKnown RBP11.3□□□□□ -0.6
HMGCS1-202ENST00000433297 LIX1Q8N485 282 aa11.3□□□□□ -0.6
HMGCS1-202ENST00000433297 STX19Q8N4C7 294 aa11.3□□□□□ -0.6
HMGCS1-202ENST00000433297 KBTBD8Q8NFY9 601 aa11.3□□□□□ -0.6
HMGCS1-202ENST00000433297 OR2T29Q8NH02 315 aa11.3□□□□□ -0.6
HMGCS1-202ENST00000433297 TRIM63Q969Q1 353 aa11.3□□□□□ -0.6
HMGCS1-202ENST00000433297 LINGO1Q96FE5 620 aa11.3□□□□□ -0.6
HMGCS1-202ENST00000433297 SEMA3CQ99985 751 aa11.3□□□□□ -0.6
HMGCS1-202ENST00000433297 ANKHQ9HCJ1 492 aa11.3□□□□□ -0.6
HMGCS1-202ENST00000433297 FARSBQ9NSD9 589 aaKnown RBP11.3□□□□□ -0.6
HMGCS1-202ENST00000433297 E9PAM4 449 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 ARNTLO00327 626 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 SEMA3DO95025 777 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 CSF2P04141 144 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 STSP08842 583 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 WARSP23381 471 aaKnown RBP11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 CA5AP35218 305 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 HK3P52790 923 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 ZNF33AQ06730 810 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 Q5BKY6 102 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 ZMAT1Q5H9K5 638 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 KIAA1614Q5VZ46 1190 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 CCDC71Q8IV32 467 aaPredicted RBP11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 HOMEZQ8IX15 550 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 CYP4Z2PQ8N1L4 340 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 ZNF675Q8TD23 568 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 PGAP3Q96FM1 320 aaPredicted RBP11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 TPD52L3Q96J77 140 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 TAS2R16Q9NYV7 291 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 LYVE1Q9Y5Y7 322 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 MROH6A6NGR9 719 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 E5RI56 91 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 OR1I1O60431 355 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 WBP4O75554 376 aaKnown RBP11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 PRKCDQ05655 676 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 DMC1Q14565 340 aa11.29□□□□□ -0.6
HMGCS1-202ENST00000433297 MED22Q15528 200 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms