RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 GLIS1Q8NBF1 620 aa13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 SPC24Q8NBT2 197 aa13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 SLC35B2Q8TB61 432 aa13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 PRR7Q8TB68 274 aa13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 LRRC45Q96CN5 670 aa13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 GPN3Q9UHW5 284 aaPredicted RBP13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 ZNF451Q9Y4E5 1061 aa13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 MDC1Q14676 2089 aaKnown RBP13.74□□□□□ -0.21
SMARCE1-205ENST00000431889 SLC5A10A0PJK1 596 aa13.74□□□□□ -0.21
SMARCE1-205ENST00000431889 BTNL10A8MVZ5 291 aa13.74□□□□□ -0.21
SMARCE1-205ENST00000431889 H3BMH7 237 aa13.74□□□□□ -0.21
SMARCE1-205ENST00000431889 CEACAM4O75871 244 aa13.74□□□□□ -0.21
SMARCE1-205ENST00000431889 MAGP20916 626 aa13.74□□□□□ -0.21
SMARCE1-205ENST00000431889 MCM3P25205 808 aa13.74□□□□□ -0.21
SMARCE1-205ENST00000431889 COL8A1P27658 744 aa13.74□□□□□ -0.21
SMARCE1-205ENST00000431889 SHMT2P34897 504 aa13.74□□□□□ -0.21
SMARCE1-205ENST00000431889 GABRA4P48169 554 aa13.74□□□□□ -0.21
SMARCE1-205ENST00000431889 CRADDP78560 199 aa13.74□□□□□ -0.21
SMARCE1-205ENST00000431889 RPA4Q13156 261 aa13.74□□□□□ -0.21
SMARCE1-205ENST00000431889 PLEKHN1Q494U1 663 aaPredicted RBP13.74□□□□□ -0.21
SMARCE1-205ENST00000431889 MRGPREQ86SM8 312 aa13.74□□□□□ -0.21
SMARCE1-205ENST00000431889 LINC01555Q8NAE3 123 aa13.74□□□□□ -0.21
SMARCE1-205ENST00000431889 OR6P1Q8NGX9 317 aa13.74□□□□□ -0.21
SMARCE1-205ENST00000431889 SGSM3Q96HU1 749 aa13.74□□□□□ -0.21
SMARCE1-205ENST00000431889 BAG1Q99933 345 aaPredicted RBP13.74□□□□□ -0.21
SMARCE1-205ENST00000431889 STOX2Q9P2F5 926 aaPredicted RBP13.74□□□□□ -0.21
SMARCE1-205ENST00000431889 IFT80Q9P2H3 777 aaPredicted RBP13.74□□□□□ -0.21
SMARCE1-205ENST00000431889 NDOR1Q9UHB4 597 aa13.74□□□□□ -0.21
SMARCE1-205ENST00000431889 FEZ2Q9UHY8 353 aaPredicted RBP13.74□□□□□ -0.21
SMARCE1-205ENST00000431889 A0A0J9YY10 115 aa13.73□□□□□ -0.21
SMARCE1-205ENST00000431889 LIN7AO14910 233 aaPredicted RBP13.73□□□□□ -0.21
SMARCE1-205ENST00000431889 NRP2O60462 931 aa13.73□□□□□ -0.21
SMARCE1-205ENST00000431889 AP2A2O94973 939 aa13.73□□□□□ -0.21
SMARCE1-205ENST00000431889 FTH1P02794 183 aa13.73□□□□□ -0.21
SMARCE1-205ENST00000431889 P3H1Q32P28 736 aa13.73□□□□□ -0.21
SMARCE1-205ENST00000431889 ZNF534Q76KX8 674 aa13.73□□□□□ -0.21
SMARCE1-205ENST00000431889 TMEM139Q8IV31 216 aa13.73□□□□□ -0.21
SMARCE1-205ENST00000431889 TBC1D21Q8IYX1 336 aa13.73□□□□□ -0.21
SMARCE1-205ENST00000431889 CISD2Q8N5K1 135 aaKnown RBP13.73□□□□□ -0.21
SMARCE1-205ENST00000431889 TTC13Q8NBP0 860 aa13.73□□□□□ -0.21
SMARCE1-205ENST00000431889 GALNT11Q8NCW6 608 aa13.73□□□□□ -0.21
SMARCE1-205ENST00000431889 OR5K2Q8NHB8 316 aa13.73□□□□□ -0.21
SMARCE1-205ENST00000431889 FAM136AQ96C01 138 aa13.73□□□□□ -0.21
SMARCE1-205ENST00000431889 TCTN2Q96GX1 697 aa13.73□□□□□ -0.21
SMARCE1-205ENST00000431889 GBP5Q96PP8 586 aa13.73□□□□□ -0.21
SMARCE1-205ENST00000431889 PPP1R2P1Q96PQ5 205 aa13.73□□□□□ -0.21
SMARCE1-205ENST00000431889 MESP1Q9BRJ9 268 aa13.73□□□□□ -0.21
SMARCE1-205ENST00000431889 MARCH4Q9P2E8 410 aaPredicted RBP13.73□□□□□ -0.21
SMARCE1-205ENST00000431889 PLEKHB1Q9UF11 243 aaPredicted RBP13.73□□□□□ -0.21
SMARCE1-205ENST00000431889 CSAG2Q9Y5P2 127 aa13.73□□□□□ -0.21
SMARCE1-205ENST00000431889 ESPL1Q14674 2120 aa13.73□□□□□ -0.21
SMARCE1-205ENST00000431889 E7EVH7 732 aa13.72□□□□□ -0.21
SMARCE1-205ENST00000431889 ZSCAN9O15535 394 aaPredicted RBP13.72□□□□□ -0.21
SMARCE1-205ENST00000431889 DPM1O60762 260 aa13.72□□□□□ -0.21
SMARCE1-205ENST00000431889 ABCB7O75027 752 aa13.72□□□□□ -0.21
SMARCE1-205ENST00000431889 OR56A5P0C7T3 313 aa13.72□□□□□ -0.21
SMARCE1-205ENST00000431889 FOLR3P41439 243 aa13.72□□□□□ -0.21
SMARCE1-205ENST00000431889 NR6A1Q15406 480 aa13.72□□□□□ -0.21
SMARCE1-205ENST00000431889 CCSMST1Q4G0I0 132 aa13.72□□□□□ -0.21
SMARCE1-205ENST00000431889 TSTD2Q5T7W7 516 aa13.72□□□□□ -0.21
SMARCE1-205ENST00000431889 PAPD7Q5XG87 772 aaKnown RBP13.72□□□□□ -0.21
SMARCE1-205ENST00000431889 MED25Q71SY5 747 aa13.72□□□□□ -0.21
SMARCE1-205ENST00000431889 GAS2L3Q86XJ1 694 aa13.72□□□□□ -0.21
SMARCE1-205ENST00000431889 RAB43Q86YS6 212 aa13.72□□□□□ -0.21
SMARCE1-205ENST00000431889 DNAJC22Q8N4W6 341 aa13.72□□□□□ -0.21
SMARCE1-205ENST00000431889 TMEM102Q8N9M5 508 aaPredicted RBP13.72□□□□□ -0.21
SMARCE1-205ENST00000431889 SYTL2Q9HCH5 934 aa13.72□□□□□ -0.21
SMARCE1-205ENST00000431889 SLC22A11Q9NSA0 550 aa13.72□□□□□ -0.21
SMARCE1-205ENST00000431889 TXLNGQ9NUQ3 528 aa13.72□□□□□ -0.21
SMARCE1-205ENST00000431889 LIASO43766 372 aa13.71□□□□□ -0.21
SMARCE1-205ENST00000431889 UMODP07911 640 aa13.71□□□□□ -0.21
SMARCE1-205ENST00000431889 F7P08709 466 aaPredicted RBP13.71□□□□□ -0.21
SMARCE1-205ENST00000431889 ITGAXP20702 1163 aa13.71□□□□□ -0.21
SMARCE1-205ENST00000431889 PSMB5P28074 263 aa13.71□□□□□ -0.21
SMARCE1-205ENST00000431889 BDKRB1P46663 353 aa13.71□□□□□ -0.21
SMARCE1-205ENST00000431889 DCDP81605 110 aaKnown RBP13.71□□□□□ -0.21
SMARCE1-205ENST00000431889 KIF5AQ12840 1032 aa13.71□□□□□ -0.21
SMARCE1-205ENST00000431889 CDH17Q12864 832 aa13.71□□□□□ -0.21
SMARCE1-205ENST00000431889 ITIH4Q14624 930 aa13.71□□□□□ -0.21
SMARCE1-205ENST00000431889 NKAIN1Q4KMZ8 207 aa13.71□□□□□ -0.21
SMARCE1-205ENST00000431889 RHBDD2Q6NTF9 364 aa13.71□□□□□ -0.21
SMARCE1-205ENST00000431889 PACS1Q6VY07 963 aa13.71□□□□□ -0.21
SMARCE1-205ENST00000431889 TTLL10Q6ZVT0 673 aa13.71□□□□□ -0.21
SMARCE1-205ENST00000431889 PPP1R32Q7Z5V6 425 aa13.71□□□□□ -0.21
SMARCE1-205ENST00000431889 AMER2Q8N7J2 671 aa13.71□□□□□ -0.21
SMARCE1-205ENST00000431889 OR4L1Q8NH43 312 aa13.71□□□□□ -0.21
SMARCE1-205ENST00000431889 SNRNP40Q96DI7 357 aaKnown RBP13.71□□□□□ -0.21
SMARCE1-205ENST00000431889 MRFAP1L1Q96HT8 127 aa13.71□□□□□ -0.21
SMARCE1-205ENST00000431889 CHRAC1Q9NRG0 131 aa13.71□□□□□ -0.21
SMARCE1-205ENST00000431889 RAB6BQ9NRW1 208 aa13.71□□□□□ -0.21
SMARCE1-205ENST00000431889 ASF1BQ9NVP2 202 aa13.71□□□□□ -0.21
SMARCE1-205ENST00000431889 P4HTMQ9NXG6 502 aa13.71□□□□□ -0.21
SMARCE1-205ENST00000431889 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.71□□□□□ -0.21
SMARCE1-205ENST00000431889 ZNF148Q9UQR1 794 aa13.71□□□□□ -0.21
SMARCE1-205ENST00000431889 PADI2Q9Y2J8 665 aa13.71□□□□□ -0.21
SMARCE1-205ENST00000431889 NFS1Q9Y697 457 aa13.71□□□□□ -0.21
SMARCE1-205ENST00000431889 GOLGA8KD6RF30 607 aa13.71□□□□□ -0.22
SMARCE1-205ENST00000431889 GOLGA8TH3BQL2 631 aa13.71□□□□□ -0.22
SMARCE1-205ENST00000431889 APRTP07741 180 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms