RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 CRYBG2Q8N1P7 616 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 ARHGAP24Q8N264 748 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 ZNF611Q8N823 705 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 AMER3Q8N944 861 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 SLC4A11Q8NBS3 891 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 NPEPL1Q8NDH3 523 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 OR13J1Q8NGT2 312 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 GRK7Q8WTQ7 553 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 SCARB1Q8WTV0 552 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 SORCS1Q8WY21 1168 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 SMG7Q92540 1137 aaKnown RBP2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 DNASE1L2Q92874 299 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 FERMT1Q9BQL6 677 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 FUT8Q9BYC5 575 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 DNAI2Q9GZS0 605 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 CDH20Q9HBT6 801 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 DDX43Q9NXZ2 648 aaKnown RBP2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 RNF7Q9UBF6 113 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 TRIM17Q9Y577 477 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 GRIN2AQ12879 1464 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 FHAD1B1AJZ9 1412 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 NUP160Q12769 1436 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 MYH14Q7Z406 1995 aaKnown RBP2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 A0A1W2PPI3 338 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 ARHGEF37A1IGU5 675 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 CASTOR2A6NHX0 329 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 HNRNPCL2B2RXH8 293 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 PSMA7O14818 248 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 SYNGR3O43761 229 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 ACSL3O95573 720 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 NTN1O95631 604 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 IGHV4-39P01824 125 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 IGKV2-30P06310 120 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 H1F0P07305 194 aaKnown RBP2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 NGFRP08138 427 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 ACAT1P24752 427 aaKnown RBP2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 AZGP1P25311 298 aaKnown RBP2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 PRKCIP41743 596 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 RPL21P46778 160 aaKnown RBP2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 KCNJ4P48050 445 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 THBS3P49746 956 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 HTR6P50406 440 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 HSPA2P54652 639 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 MFAP3P55082 362 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 B3GALT5-AS1P59052 145 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 PITX1P78337 314 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 C17orf67Q0P5P2 114 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 PLA2G7Q13093 441 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 TNK1Q13470 666 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 NFE2L1Q14494 772 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 KIR2DS3Q14952 304 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 SF3B4Q15427 424 aaKnown RBP eCLIP2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 DUOXA1Q1HG43 343 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 KIF19Q2TAC6 998 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 UGT3A2Q3SY77 523 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 ANKRD20A4Q4UJ75 823 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 ANKRD20A8PQ5CZ79 823 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 ANKRD20A2Q5SQ80 823 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 NDUFAF5Q5TEU4 345 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 ANKRD20A1Q5TYW2 823 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 SFMBT2Q5VUG0 894 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 ANKRD20A3Q5VUR7 823 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 CAPRIN2Q6IMN6 1127 aaKnown RBP2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 FAM171BQ6P995 826 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 TMEM182Q6ZP80 229 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 CREB3L2Q70SY1 520 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 ANKRD33Q7Z3H0 272 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 FAM114A1Q8IWE2 563 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 DCP1BQ8IZD4 617 aaKnown RBP2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 ANKRD13CQ8N6S4 541 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 NAT8LQ8N9F0 302 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 Q8N9P0 234 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 PPFIBP2Q8ND30 876 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 RDM1Q8NG50 284 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 VANGL1Q8TAA9 524 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 AFAP1L1Q8TED9 768 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 NSMAFQ92636 917 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 NEUROG1Q92886 237 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 SNRNP40Q96DI7 357 aaKnown RBP2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 LINGO1Q96FE5 620 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 OXNAD1Q96HP4 312 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 CCDC114Q96M63 670 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 RAD9AQ99638 391 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 TMEM204Q9BSN7 226 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 ZNF350Q9GZX5 532 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 FN3KQ9H479 309 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 FKRPQ9H9S5 495 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 TRPC7Q9HCX4 862 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 ERAP1Q9NZ08 941 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 CCDC88BA6NC98 1476 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 SMCHD1A6NHR9 2005 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 CEP170Q5SW79 1584 aa2.95□□□□□ -1.94
HMGB1P27-201ENST00000431429 KIAA1210Q9ULL0 1709 aa2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 A0A1W2PS18 150 aa2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 MYMKA6NI61 221 aa2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 DUXAA6NLW8 204 aa2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 GAPDHSO14556 408 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P27-201ENST00000431429 MEIS2O14770 477 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms