RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 TRAM1L1Q8N609 369 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 OR2T12Q8NG77 320 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 ITFG1Q8TB96 612 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 SELENOMQ8WWX9 145 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 GTF2H4Q92759 462 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 TCEAL4Q96EI5 215 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 ACPTQ9BZG2 426 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 ABCG8Q9H221 673 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 CLK4Q9HAZ1 481 aaKnown RBP13.36□□□□□ -0.27
THBS3-202ENST00000428962 DNAJC11Q9NVH1 559 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 UPK3BL1B0FP48 263 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 UPK3BL2E5RIL1 263 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 DEAF1O75398 565 aaPredicted RBP13.36□□□□□ -0.27
THBS3-202ENST00000428962 RAP2AP10114 183 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 TCF3P15923 654 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 ZNF23P17027 643 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 XPAP23025 273 aaPredicted RBP13.36□□□□□ -0.27
THBS3-202ENST00000428962 HOXA9P31269 272 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 RPS14P62263 151 aaKnown RBP13.36□□□□□ -0.27
THBS3-202ENST00000428962 ZNF33BQ06732 778 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 DYNC1I2Q13409 638 aaKnown RBP13.36□□□□□ -0.27
THBS3-202ENST00000428962 KCNC3Q14003 757 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 SELPLGQ14242 412 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 ZNF77Q15935 545 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 CPSF6Q16630 551 aaKnown RBP eCLIP13.36□□□□□ -0.27
THBS3-202ENST00000428962 SLC5A9Q2M3M2 681 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 KCTD21Q4G0X4 260 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 LRRC73Q5JTD7 316 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 SPANXN4Q5MJ08 99 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 THEMIS2Q5TEJ8 643 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 PLPP4Q5VZY2 271 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 ISLR2Q6UXK2 745 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 RBM44Q6ZP01 1051 aaKnown RBP13.36□□□□□ -0.27
THBS3-202ENST00000428962 KIAA0907Q7Z7F0 614 aaPredicted RBP13.36□□□□□ -0.27
THBS3-202ENST00000428962 DTWD1Q8N5C7 304 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 METTL25Q8N6Q8 603 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 TRIML2Q8N7C3 387 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 L3MBTL4Q8NA19 623 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 FAM47BQ8NA70 645 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 BPIFB1Q8TDL5 484 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 ASZ1Q8WWH4 475 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 RNF145Q96MT1 663 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 ZSCAN5AQ9BUG6 496 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 CHID1Q9BWS9 393 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 UGT2B28Q9BY64 529 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 PIF1Q9H611 641 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 RMND5AQ9H871 391 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 CAAP1Q9H8G2 361 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 GORASP2Q9H8Y8 452 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 SMPD3Q9NY59 655 aaPredicted RBP13.36□□□□□ -0.27
THBS3-202ENST00000428962 PTTG2Q9NZH5 202 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 VAPAQ9P0L0 249 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 MARK1Q9P0L2 795 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 CD84Q9UIB8 345 aa13.36□□□□□ -0.27
THBS3-202ENST00000428962 KCNE1BA0A087WTH5 132 aa13.35□□□□□ -0.27
THBS3-202ENST00000428962 SERTM1A2A2V5 107 aa13.35□□□□□ -0.27
THBS3-202ENST00000428962 NPIPB8E9PQR5 432 aa13.35□□□□□ -0.27
THBS3-202ENST00000428962 GFYI3L273 518 aa13.35□□□□□ -0.27
THBS3-202ENST00000428962 PDLIM1O00151 329 aa13.35□□□□□ -0.27
THBS3-202ENST00000428962 SLC9A3R1O14745 358 aaPredicted RBP13.35□□□□□ -0.27
THBS3-202ENST00000428962 ACOX3O15254 700 aa13.35□□□□□ -0.27
THBS3-202ENST00000428962 CLOCKO15516 846 aa13.35□□□□□ -0.27
THBS3-202ENST00000428962 DFNA5O60443 496 aa13.35□□□□□ -0.27
THBS3-202ENST00000428962 XYLBO75191 536 aa13.35□□□□□ -0.27
THBS3-202ENST00000428962 ERN1O75460 977 aaKnown RBP13.35□□□□□ -0.27
THBS3-202ENST00000428962 PDYNP01213 254 aa13.35□□□□□ -0.27
THBS3-202ENST00000428962 RHOP08100 348 aa13.35□□□□□ -0.27
THBS3-202ENST00000428962 BCKDHAP12694 445 aa13.35□□□□□ -0.27
THBS3-202ENST00000428962 HOXB6P17509 224 aaKnown RBP13.35□□□□□ -0.27
THBS3-202ENST00000428962 EPORP19235 508 aa13.35□□□□□ -0.27
THBS3-202ENST00000428962 MAPK9P45984 424 aa13.35□□□□□ -0.27
THBS3-202ENST00000428962 RPS9P46781 194 aaKnown RBP13.35□□□□□ -0.27
THBS3-202ENST00000428962 CLDN8P56748 225 aa13.35□□□□□ -0.27
THBS3-202ENST00000428962 CHRNB3Q05901 458 aa13.35□□□□□ -0.27
THBS3-202ENST00000428962 ZNF284Q2VY69 593 aa13.35□□□□□ -0.27
THBS3-202ENST00000428962 SLC36A3Q495N2 470 aa13.35□□□□□ -0.27
THBS3-202ENST00000428962 LY6G5CQ5SRR4 150 aa13.35□□□□□ -0.27
THBS3-202ENST00000428962 SUSD1Q6UWL2 747 aa13.35□□□□□ -0.27
THBS3-202ENST00000428962 MRPL43Q8N983 215 aaKnown RBP13.35□□□□□ -0.27
THBS3-202ENST00000428962 DDHD1Q8NEL9 900 aa13.35□□□□□ -0.27
THBS3-202ENST00000428962 ELMO1Q92556 727 aa13.35□□□□□ -0.27
THBS3-202ENST00000428962 CMTM7Q96FZ5 175 aa13.35□□□□□ -0.27
THBS3-202ENST00000428962 LRIG1Q96JA1 1093 aa13.35□□□□□ -0.27
THBS3-202ENST00000428962 VPS50Q96JG6 964 aa13.35□□□□□ -0.27
THBS3-202ENST00000428962 OR52E6Q96RD3 313 aa13.35□□□□□ -0.27
THBS3-202ENST00000428962 SEPHS2Q99611 448 aa13.35□□□□□ -0.27
THBS3-202ENST00000428962 THUMPD3Q9BV44 507 aaKnown RBP13.35□□□□□ -0.27
THBS3-202ENST00000428962 OLAHQ9NV23 265 aa13.35□□□□□ -0.27
THBS3-202ENST00000428962 TUBA8Q9NY65 449 aaPredicted RBP13.35□□□□□ -0.27
THBS3-202ENST00000428962 ZNHIT2Q9UHR6 403 aa13.35□□□□□ -0.27
THBS3-202ENST00000428962 ZNF639Q9UID6 485 aa13.35□□□□□ -0.27
THBS3-202ENST00000428962 TMPRSS11EQ9UL52 423 aa13.35□□□□□ -0.27
THBS3-202ENST00000428962 USP22Q9UPT9 525 aa13.35□□□□□ -0.27
THBS3-202ENST00000428962 NEUROG3Q9Y4Z2 214 aa13.35□□□□□ -0.27
THBS3-202ENST00000428962 CCDC160A6NGH7 325 aa13.34□□□□□ -0.27
THBS3-202ENST00000428962 EI24O14681 340 aa13.34□□□□□ -0.27
THBS3-202ENST00000428962 UGDHO60701 494 aa13.34□□□□□ -0.27
THBS3-202ENST00000428962 MOSPD3O75425 235 aa13.34□□□□□ -0.27
THBS3-202ENST00000428962 LEFTY1O75610 366 aa13.34□□□□□ -0.27
THBS3-202ENST00000428962 SCELO95171 688 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms