RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 RAP2CQ9Y3L5 183 aa8.64□□□□□ -1.03
SMC6-204ENST00000428868 SCN3AQ9NY46 2000 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 TRBV23OR9-2A0A075B6M9 112 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 A6NCN8 305 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 ERICH4A6NGS2 130 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 PDZK1P1A8MUH7 402 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 MYO1CO00159 1063 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 TNFRSF10CO14798 259 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 LAMTOR5O43504 91 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 WDR47O94967 919 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 OR4F21O95013 312 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 TGDSO95455 350 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 SLC16A8O95907 504 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 CATP04040 527 aaKnown RBP8.63□□□□□ -1.03
SMC6-204ENST00000428868 SLC35G4P0C7Q5 338 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 TROVE2P10155 538 aaKnown RBP eCLIP8.63□□□□□ -1.03
SMC6-204ENST00000428868 ALOX15P16050 662 aaPredicted RBP8.63□□□□□ -1.03
SMC6-204ENST00000428868 KELP23276 732 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 HTR1BP28222 390 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 CD38P28907 300 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 ACTR1BP42025 376 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 HTR6P50406 440 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 RPL14P50914 215 aaKnown RBP8.63□□□□□ -1.03
SMC6-204ENST00000428868 AQP5P55064 265 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 ERVPABLB-1P60509 514 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 ACTR1AP61163 376 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 YBX1P67809 324 aaKnown RBP8.63□□□□□ -1.03
SMC6-204ENST00000428868 BTKQ06187 659 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 LCP2Q13094 533 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 PRKAA1Q13131 559 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 RPA4Q13156 261 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 C1orf61Q13536 156 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 UGT3A2Q3SY77 523 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 GKAP1Q5VSY0 366 aaPredicted RBP8.63□□□□□ -1.03
SMC6-204ENST00000428868 LETMD1Q6P1Q0 360 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 AGTRAPQ6RW13 159 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 UNC5DQ6UXZ4 953 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 SLC36A4Q6YBV0 504 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 C1orf210Q8IVY1 113 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 LRRC56Q8IYG6 542 aaPredicted RBP8.63□□□□□ -1.03
SMC6-204ENST00000428868 PHACTR4Q8IZ21 702 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 RGL4Q8IZJ4 473 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 CACNA2D3Q8IZS8 1091 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 C2orf73Q8N5S3 287 aaPredicted RBP8.63□□□□□ -1.03
SMC6-204ENST00000428868 DTWD2Q8NBA8 298 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 FBXO15Q8NCQ5 510 aaPredicted RBP8.63□□□□□ -1.03
SMC6-204ENST00000428868 CCDC197Q8NCU1 140 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 MCOLN3Q8TDD5 553 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 ZNF480Q8WV37 535 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 TFGQ92734 400 aaPredicted RBP8.63□□□□□ -1.03
SMC6-204ENST00000428868 KLHDC7BQ96G42 594 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 OR4K3Q96R72 315 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 OR52B2Q96RD2 323 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 MENTQ9BUN1 341 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 LRRC61Q9BV99 259 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 TRIM55Q9BYV6 548 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 NUF2Q9BZD4 464 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 ILKAPQ9H0C8 392 aaPredicted RBP8.63□□□□□ -1.03
SMC6-204ENST00000428868 PCED1AQ9H1Q7 454 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 DUSP15Q9H1R2 295 aaPredicted RBP8.63□□□□□ -1.03
SMC6-204ENST00000428868 NOL11Q9H8H0 719 aaKnown RBP8.63□□□□□ -1.03
SMC6-204ENST00000428868 ABCF3Q9NUQ8 709 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 IMP3Q9NV31 184 aaKnown RBP8.63□□□□□ -1.03
SMC6-204ENST00000428868 INTS7Q9NVH2 962 aaKnown RBP8.63□□□□□ -1.03
SMC6-204ENST00000428868 OPTCQ9UBM4 332 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 GIMAP2Q9UG22 337 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 TDRKHQ9Y2W6 561 aaKnown RBP8.63□□□□□ -1.03
SMC6-204ENST00000428868 TIMM22Q9Y584 194 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 DGKBQ9Y6T7 804 aa8.63□□□□□ -1.03
SMC6-204ENST00000428868 RP1P56715 2156 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 GOLGA8QA0A0J9YX86 632 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 GOLGA8OA6NCC3 632 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 GOLGA8NF8WBI6 632 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 K7EPI3 171 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 MATN2O00339 956 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 SDHDO14521 159 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 TOR1BO14657 336 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 HRO43593 1189 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 KATNA1O75449 491 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 STK16O75716 305 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 TNFP01375 233 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 HIST1H2AGP0C0S8 130 aaPredicted RBP8.62□□□□□ -1.03
SMC6-204ENST00000428868 HIST1H2ADP20671 130 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 IDSP22304 550 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 MAP4P27816 1152 aaKnown RBP8.62□□□□□ -1.03
SMC6-204ENST00000428868 PSMB5P28074 263 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 HOXA6P31267 233 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 GGT5P36269 586 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 NUDT1P36639 197 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 SERPINB5P36952 375 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 PIK3CGP48736 1102 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 DHPSP49366 369 aaPredicted RBP8.62□□□□□ -1.03
SMC6-204ENST00000428868 CSNK1EP49674 416 aaKnown RBP8.62□□□□□ -1.03
SMC6-204ENST00000428868 IDH3AP50213 366 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 ARFIP2P53365 341 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 AP1S2P56377 157 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 TBPL1P62380 186 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 RACK1P63244 317 aaKnown RBP8.62□□□□□ -1.03
SMC6-204ENST00000428868 BNC1Q01954 994 aa8.62□□□□□ -1.03
SMC6-204ENST00000428868 GALNT1Q10472 559 aaPredicted RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms