RNA–Protein interactions for RNA: ENST00000428659.1

TIMM9P3-201, Transcript of TIMM9 pseudogene 3, humanhuman

BASIC

Gene TIMM9P3, Length 274 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMM9P3-201ENST00000428659 SRRM5B3KS81 715 aa2.79□□□□□ -1.96
TIMM9P3-201ENST00000428659 F5H0A9 414 aaPredicted RBP2.79□□□□□ -1.96
TIMM9P3-201ENST00000428659 SOCS3O14543 225 aa2.79□□□□□ -1.96
TIMM9P3-201ENST00000428659 CTDSP2O14595 271 aa2.79□□□□□ -1.96
TIMM9P3-201ENST00000428659 AP3D1O14617 1153 aa2.79□□□□□ -1.96
TIMM9P3-201ENST00000428659 HSPA8P11142 646 aaKnown RBP2.79□□□□□ -1.96
TIMM9P3-201ENST00000428659 DNASE1P24855 282 aa2.79□□□□□ -1.96
TIMM9P3-201ENST00000428659 NOVP48745 357 aa2.79□□□□□ -1.96
TIMM9P3-201ENST00000428659 PNLIPRP2P54317 469 aa2.79□□□□□ -1.96
TIMM9P3-201ENST00000428659 CSNK2BP67870 215 aa2.79□□□□□ -1.96
TIMM9P3-201ENST00000428659 PRKCZQ05513 592 aa2.79□□□□□ -1.96
TIMM9P3-201ENST00000428659 NFATC2Q13469 925 aa2.79□□□□□ -1.96
TIMM9P3-201ENST00000428659 MTF1Q14872 753 aa2.79□□□□□ -1.96
TIMM9P3-201ENST00000428659 DUSP28Q4G0W2 176 aa2.79□□□□□ -1.96
TIMM9P3-201ENST00000428659 RNASEH2BQ5TBB1 312 aaKnown RBP2.79□□□□□ -1.96
TIMM9P3-201ENST00000428659 FAAH2Q6GMR7 532 aa2.79□□□□□ -1.96
TIMM9P3-201ENST00000428659 FAAP20Q6NZ36 180 aa2.79□□□□□ -1.96
TIMM9P3-201ENST00000428659 SLC25A47Q6Q0C1 308 aa2.79□□□□□ -1.96
TIMM9P3-201ENST00000428659 PAQR6Q6TCH4 344 aa2.79□□□□□ -1.96
TIMM9P3-201ENST00000428659 TMEM207Q6UWW9 146 aa2.79□□□□□ -1.96
TIMM9P3-201ENST00000428659 CFAP206Q8IYR0 622 aa2.79□□□□□ -1.96
TIMM9P3-201ENST00000428659 Q8N377 158 aa2.79□□□□□ -1.96
TIMM9P3-201ENST00000428659 AMER3Q8N944 861 aa2.79□□□□□ -1.96
TIMM9P3-201ENST00000428659 OR5AP2Q8NGF4 316 aa2.79□□□□□ -1.96
TIMM9P3-201ENST00000428659 MOSPD2Q8NHP6 518 aa2.79□□□□□ -1.96
TIMM9P3-201ENST00000428659 C11orf45Q8TAV5 145 aa2.79□□□□□ -1.96
TIMM9P3-201ENST00000428659 SMAP2Q8WU79 429 aaPredicted RBP2.79□□□□□ -1.96
TIMM9P3-201ENST00000428659 PHLDA1Q8WV24 401 aaPredicted RBP2.79□□□□□ -1.96
TIMM9P3-201ENST00000428659 SUSD6Q92537 303 aa2.79□□□□□ -1.96
TIMM9P3-201ENST00000428659 C10orf90Q96M02 699 aa2.79□□□□□ -1.96
TIMM9P3-201ENST00000428659 NECTIN4Q96NY8 510 aa2.79□□□□□ -1.96
TIMM9P3-201ENST00000428659 AGAP3Q96P47 875 aa2.79□□□□□ -1.96
TIMM9P3-201ENST00000428659 SPATC1LQ9H0A9 340 aa2.79□□□□□ -1.96
TIMM9P3-201ENST00000428659 THAP2Q9H0W7 228 aa2.79□□□□□ -1.96
TIMM9P3-201ENST00000428659 GHITMQ9H3K2 345 aa2.79□□□□□ -1.96
TIMM9P3-201ENST00000428659 SMARCAD1Q9H4L7 1026 aa2.79□□□□□ -1.96
TIMM9P3-201ENST00000428659 P4HTMQ9NXG6 502 aa2.79□□□□□ -1.96
TIMM9P3-201ENST00000428659 ARHGEF38Q9NXL2 777 aa2.79□□□□□ -1.96
TIMM9P3-201ENST00000428659 ZNF215Q9UL58 517 aaPredicted RBP2.79□□□□□ -1.96
TIMM9P3-201ENST00000428659 ZNF148Q9UQR1 794 aa2.79□□□□□ -1.96
TIMM9P3-201ENST00000428659 WDR37Q9Y2I8 494 aa2.79□□□□□ -1.96
TIMM9P3-201ENST00000428659 A0A1W2PPR1 153 aa2.78□□□□□ -1.96
TIMM9P3-201ENST00000428659 ANKRD61A6NGH8 418 aa2.78□□□□□ -1.96
TIMM9P3-201ENST00000428659 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.78□□□□□ -1.96
TIMM9P3-201ENST00000428659 KLF11O14901 512 aa2.78□□□□□ -1.96
TIMM9P3-201ENST00000428659 MED24O75448 989 aa2.78□□□□□ -1.96
TIMM9P3-201ENST00000428659 DFFBO76075 338 aa2.78□□□□□ -1.96
TIMM9P3-201ENST00000428659 ACADSP16219 412 aa2.78□□□□□ -1.96
TIMM9P3-201ENST00000428659 CA6P23280 308 aa2.78□□□□□ -1.96
TIMM9P3-201ENST00000428659 PAX3P23760 479 aa2.78□□□□□ -1.96
TIMM9P3-201ENST00000428659 TLX1P31314 330 aaPredicted RBP2.78□□□□□ -1.96
TIMM9P3-201ENST00000428659 MMP12P39900 470 aa2.78□□□□□ -1.96
TIMM9P3-201ENST00000428659 CDH13P55290 713 aa2.78□□□□□ -1.96
TIMM9P3-201ENST00000428659 CDK3Q00526 305 aa2.78□□□□□ -1.96
TIMM9P3-201ENST00000428659 CREB5Q02930 508 aa2.78□□□□□ -1.96
TIMM9P3-201ENST00000428659 PCLAFQ15004 111 aa2.78□□□□□ -1.96
TIMM9P3-201ENST00000428659 HSP90AB4PQ58FF6 505 aa2.78□□□□□ -1.96
TIMM9P3-201ENST00000428659 METTL7BQ6UX53 244 aa2.78□□□□□ -1.96
TIMM9P3-201ENST00000428659 SZRD1Q7Z422 152 aa2.78□□□□□ -1.96
TIMM9P3-201ENST00000428659 LYG1Q8N1E2 194 aa2.78□□□□□ -1.96
TIMM9P3-201ENST00000428659 BARD1Q99728 777 aaKnown RBP2.78□□□□□ -1.96
TIMM9P3-201ENST00000428659 LMF2Q9BU23 707 aaKnown RBP2.78□□□□□ -1.96
TIMM9P3-201ENST00000428659 SERINC1Q9NRX5 453 aa2.78□□□□□ -1.96
TIMM9P3-201ENST00000428659 THEGQ9P2T0 379 aa2.78□□□□□ -1.96
TIMM9P3-201ENST00000428659 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.78□□□□□ -1.96
TIMM9P3-201ENST00000428659 CSAG2Q9Y5P2 127 aa2.78□□□□□ -1.96
TIMM9P3-201ENST00000428659 RSF1Q96T23 1441 aaPredicted RBP2.77□□□□□ -1.97
TIMM9P3-201ENST00000428659 ARID4BQ4LE39 1312 aaPredicted RBP2.77□□□□□ -1.97
TIMM9P3-201ENST00000428659 LOC102723996A0A087X1L8 192 aa2.77□□□□□ -1.97
TIMM9P3-201ENST00000428659 MAGEC1O60732 1142 aa2.77□□□□□ -1.97
TIMM9P3-201ENST00000428659 ENTPD3O75355 529 aa2.77□□□□□ -1.97
TIMM9P3-201ENST00000428659 DARSP14868 501 aaKnown RBP2.77□□□□□ -1.97
TIMM9P3-201ENST00000428659 MPZP25189 248 aa2.77□□□□□ -1.97
TIMM9P3-201ENST00000428659 GCH1P30793 250 aa2.77□□□□□ -1.97
TIMM9P3-201ENST00000428659 HOXD13P35453 343 aa2.77□□□□□ -1.97
TIMM9P3-201ENST00000428659 PSMB10P40306 273 aa2.77□□□□□ -1.97
TIMM9P3-201ENST00000428659 RXRGP48443 463 aa2.77□□□□□ -1.97
TIMM9P3-201ENST00000428659 GSDMDP57764 484 aa2.77□□□□□ -1.97
TIMM9P3-201ENST00000428659 SIRPAP78324 504 aa2.77□□□□□ -1.97
TIMM9P3-201ENST00000428659 CA9Q16790 459 aa2.77□□□□□ -1.97
TIMM9P3-201ENST00000428659 C2CD6Q53TS8 623 aa2.77□□□□□ -1.97
TIMM9P3-201ENST00000428659 TCTE1Q5JU00 501 aa2.77□□□□□ -1.97
TIMM9P3-201ENST00000428659 FAM205BPQ63HN1 556 aa2.77□□□□□ -1.97
TIMM9P3-201ENST00000428659 TMEM211Q6ICI0 200 aa2.77□□□□□ -1.97
TIMM9P3-201ENST00000428659 ZNF774Q6NX45 483 aa2.77□□□□□ -1.97
TIMM9P3-201ENST00000428659 RSRC2Q7L4I2 434 aaKnown RBP2.77□□□□□ -1.97
TIMM9P3-201ENST00000428659 MARVELD2Q8N4S9 558 aa2.77□□□□□ -1.97
TIMM9P3-201ENST00000428659 VANGL1Q8TAA9 524 aaPredicted RBP2.77□□□□□ -1.97
TIMM9P3-201ENST00000428659 ZNF519Q8TB69 540 aa2.77□□□□□ -1.97
TIMM9P3-201ENST00000428659 PTPMT1Q8WUK0 201 aaPredicted RBP2.77□□□□□ -1.97
TIMM9P3-201ENST00000428659 GTF3AQ92664 365 aaKnown RBP2.77□□□□□ -1.97
TIMM9P3-201ENST00000428659 FAM218AQ96MZ4 157 aa2.77□□□□□ -1.97
TIMM9P3-201ENST00000428659 NEK1Q96PY6 1258 aa2.77□□□□□ -1.97
TIMM9P3-201ENST00000428659 RAD9AQ99638 391 aa2.77□□□□□ -1.97
TIMM9P3-201ENST00000428659 SLC35C2Q9NQQ7 365 aa2.77□□□□□ -1.97
TIMM9P3-201ENST00000428659 CCDC177Q9NQR7 707 aaPredicted RBP2.77□□□□□ -1.97
TIMM9P3-201ENST00000428659 SPHK2Q9NRA0 654 aa2.77□□□□□ -1.97
TIMM9P3-201ENST00000428659 MAN2C1Q9NTJ4 1040 aa2.77□□□□□ -1.97
TIMM9P3-201ENST00000428659 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.77□□□□□ -1.97
TIMM9P3-201ENST00000428659 NUDT4Q9NZJ9 180 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms