RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 MED8Q96G25 268 aa11.74□□□□□ -0.53
RFC4-206ENST00000427785 SEC16BQ96JE7 1060 aa11.74□□□□□ -0.53
RFC4-206ENST00000427785 KCNA7Q96RP8 456 aa11.74□□□□□ -0.53
RFC4-206ENST00000427785 NRTNQ99748 197 aa11.74□□□□□ -0.53
RFC4-206ENST00000427785 TRMOQ9BU70 441 aa11.74□□□□□ -0.53
RFC4-206ENST00000427785 LRRC61Q9BV99 259 aa11.74□□□□□ -0.53
RFC4-206ENST00000427785 TMEM120AQ9BXJ8 343 aa11.74□□□□□ -0.53
RFC4-206ENST00000427785 CD244Q9BZW8 370 aa11.74□□□□□ -0.53
RFC4-206ENST00000427785 ILKAPQ9H0C8 392 aaPredicted RBP11.74□□□□□ -0.53
RFC4-206ENST00000427785 TRIT1Q9H3H1 467 aaKnown RBP11.74□□□□□ -0.53
RFC4-206ENST00000427785 EML4Q9HC35 981 aaKnown RBP11.74□□□□□ -0.53
RFC4-206ENST00000427785 ABCF3Q9NUQ8 709 aa11.74□□□□□ -0.53
RFC4-206ENST00000427785 KLHL14Q9P2G3 628 aa11.74□□□□□ -0.53
RFC4-206ENST00000427785 APOBEC3BQ9UH17 382 aaKnown RBP11.74□□□□□ -0.53
RFC4-206ENST00000427785 ZDHHC2Q9UIJ5 367 aa11.74□□□□□ -0.53
RFC4-206ENST00000427785 HAO1Q9UJM8 370 aa11.74□□□□□ -0.53
RFC4-206ENST00000427785 ANGPTL3Q9Y5C1 460 aa11.74□□□□□ -0.53
RFC4-206ENST00000427785 TNPO3Q9Y5L0 923 aaKnown RBP11.74□□□□□ -0.53
RFC4-206ENST00000427785 USH1CQ9Y6N9 552 aa11.74□□□□□ -0.53
RFC4-206ENST00000427785 MDC1Q14676 2089 aaKnown RBP11.74□□□□□ -0.53
RFC4-206ENST00000427785 PRAMEF33A0A0G2JMD5 474 aa11.73□□□□□ -0.53
RFC4-206ENST00000427785 FAM86C2PA6NEL3 165 aa11.73□□□□□ -0.53
RFC4-206ENST00000427785 K7EPI3 171 aa11.73□□□□□ -0.53
RFC4-206ENST00000427785 OR7A17O14581 309 aa11.73□□□□□ -0.53
RFC4-206ENST00000427785 GPR37L1O60883 481 aa11.73□□□□□ -0.53
RFC4-206ENST00000427785 KCNJ13O60928 360 aa11.73□□□□□ -0.53
RFC4-206ENST00000427785 STK16O75716 305 aa11.73□□□□□ -0.53
RFC4-206ENST00000427785 SLC16A8O95907 504 aa11.73□□□□□ -0.53
RFC4-206ENST00000427785 RPN2P04844 631 aa11.73□□□□□ -0.53
RFC4-206ENST00000427785 JUNP05412 331 aaKnown RBP11.73□□□□□ -0.53
RFC4-206ENST00000427785 MTHFD1P11586 935 aaKnown RBP11.73□□□□□ -0.53
RFC4-206ENST00000427785 JUNDP17535 347 aa11.73□□□□□ -0.53
RFC4-206ENST00000427785 PRDX3P30048 256 aaKnown RBP11.73□□□□□ -0.53
RFC4-206ENST00000427785 SLC6A12P48065 614 aa11.73□□□□□ -0.53
RFC4-206ENST00000427785 CSNK1EP49674 416 aaKnown RBP11.73□□□□□ -0.53
RFC4-206ENST00000427785 RPL14P50914 215 aaKnown RBP11.73□□□□□ -0.53
RFC4-206ENST00000427785 AQP5P55064 265 aa11.73□□□□□ -0.53
RFC4-206ENST00000427785 NXPH1P58417 271 aa11.73□□□□□ -0.53
RFC4-206ENST00000427785 TBPL1P62380 186 aa11.73□□□□□ -0.53
RFC4-206ENST00000427785 TRAF3Q13114 568 aa11.73□□□□□ -0.53
RFC4-206ENST00000427785 GOLGA4Q13439 2230 aaKnown RBP11.73□□□□□ -0.53
RFC4-206ENST00000427785 C1orf61Q13536 156 aa11.73□□□□□ -0.53
RFC4-206ENST00000427785 NAE1Q13564 534 aa11.73□□□□□ -0.53
RFC4-206ENST00000427785 GRB7Q14451 532 aa11.73□□□□□ -0.53
RFC4-206ENST00000427785 UAP1L1Q3KQV9 507 aa11.73□□□□□ -0.53
RFC4-206ENST00000427785 ZNF318Q5VUA4 2279 aa11.73□□□□□ -0.53
RFC4-206ENST00000427785 AGTRAPQ6RW13 159 aa11.73□□□□□ -0.53
RFC4-206ENST00000427785 GPRIN3Q6ZVF9 776 aa11.73□□□□□ -0.53
RFC4-206ENST00000427785 SYVN1Q86TM6 617 aa11.73□□□□□ -0.53
RFC4-206ENST00000427785 IQCHQ86VS3 1027 aa11.73□□□□□ -0.53
RFC4-206ENST00000427785 OR52B6Q8NGF0 335 aa11.73□□□□□ -0.53
RFC4-206ENST00000427785 OR9A1PQ8NGU1 263 aa11.73□□□□□ -0.53
RFC4-206ENST00000427785 OR5K2Q8NHB8 316 aa11.73□□□□□ -0.53
RFC4-206ENST00000427785 MAPK15Q8TD08 544 aa11.73□□□□□ -0.53
RFC4-206ENST00000427785 JPH3Q8WXH2 748 aaPredicted RBP11.73□□□□□ -0.53
RFC4-206ENST00000427785 DNASE2BQ8WZ79 361 aa11.73□□□□□ -0.53
RFC4-206ENST00000427785 PRR11Q96HE9 360 aaPredicted RBP11.73□□□□□ -0.53
RFC4-206ENST00000427785 PPP1R36Q96LQ0 422 aa11.73□□□□□ -0.53
RFC4-206ENST00000427785 CCDC138Q96M89 665 aa11.73□□□□□ -0.53
RFC4-206ENST00000427785 CDK15Q96Q40 435 aa11.73□□□□□ -0.53
RFC4-206ENST00000427785 PCDH15Q96QU1 1955 aa11.73□□□□□ -0.53
RFC4-206ENST00000427785 FERD3LQ96RJ6 166 aa11.73□□□□□ -0.53
RFC4-206ENST00000427785 GSDMCQ9BYG8 508 aa11.73□□□□□ -0.53
RFC4-206ENST00000427785 NOL11Q9H8H0 719 aaKnown RBP11.73□□□□□ -0.53
RFC4-206ENST00000427785 TRNAU1APQ9NX07 287 aaKnown RBP11.73□□□□□ -0.53
RFC4-206ENST00000427785 A6NCN8 305 aa11.72□□□□□ -0.53
RFC4-206ENST00000427785 TLR4O00206 839 aa11.72□□□□□ -0.53
RFC4-206ENST00000427785 HGSO14964 777 aaPredicted RBP11.72□□□□□ -0.53
RFC4-206ENST00000427785 BCAT2O15382 392 aaPredicted RBP11.72□□□□□ -0.53
RFC4-206ENST00000427785 CRCPO75575 148 aa11.72□□□□□ -0.53
RFC4-206ENST00000427785 OR4F21O95013 312 aa11.72□□□□□ -0.53
RFC4-206ENST00000427785 TGDSO95455 350 aa11.72□□□□□ -0.53
RFC4-206ENST00000427785 MLYCDO95822 493 aa11.72□□□□□ -0.53
RFC4-206ENST00000427785 CTSEP14091 401 aa11.72□□□□□ -0.53
RFC4-206ENST00000427785 NME1P15531 152 aaKnown RBP11.72□□□□□ -0.53
RFC4-206ENST00000427785 HALP42357 657 aa11.72□□□□□ -0.53
RFC4-206ENST00000427785 HNMTP50135 292 aa11.72□□□□□ -0.53
RFC4-206ENST00000427785 CCNG1P51959 295 aa11.72□□□□□ -0.53
RFC4-206ENST00000427785 FOXA1P55317 472 aa11.72□□□□□ -0.53
RFC4-206ENST00000427785 C21orf59P57076 290 aa11.72□□□□□ -0.53
RFC4-206ENST00000427785 SH3BP2P78314 561 aa11.72□□□□□ -0.53
RFC4-206ENST00000427785 FASTKQ14296 549 aaKnown RBP11.72□□□□□ -0.53
RFC4-206ENST00000427785 RPE65Q16518 533 aa11.72□□□□□ -0.53
RFC4-206ENST00000427785 PLK5Q496M5 336 aa11.72□□□□□ -0.53
RFC4-206ENST00000427785 VWA5B1Q5TIE3 1220 aa11.72□□□□□ -0.53
RFC4-206ENST00000427785 LETMD1Q6P1Q0 360 aa11.72□□□□□ -0.53
RFC4-206ENST00000427785 FOXR1Q6PIV2 292 aa11.72□□□□□ -0.53
RFC4-206ENST00000427785 CEP68Q76N32 757 aa11.72□□□□□ -0.53
RFC4-206ENST00000427785 DCP2Q8IU60 420 aaKnown RBP11.72□□□□□ -0.53
RFC4-206ENST00000427785 WDR75Q8IWA0 830 aaKnown RBP11.72□□□□□ -0.53
RFC4-206ENST00000427785 SFTPA2Q8IWL1 248 aa11.72□□□□□ -0.53
RFC4-206ENST00000427785 SYTL1Q8IYJ3 562 aa11.72□□□□□ -0.53
RFC4-206ENST00000427785 TBC1D21Q8IYX1 336 aa11.72□□□□□ -0.53
RFC4-206ENST00000427785 C2orf73Q8N5S3 287 aaPredicted RBP11.72□□□□□ -0.53
RFC4-206ENST00000427785 GPBAR1Q8TDU6 330 aa11.72□□□□□ -0.53
RFC4-206ENST00000427785 ZNF480Q8WV37 535 aa11.72□□□□□ -0.53
RFC4-206ENST00000427785 PATE1Q8WXA2 126 aa11.72□□□□□ -0.53
RFC4-206ENST00000427785 ATL1Q8WXF7 558 aa11.72□□□□□ -0.53
RFC4-206ENST00000427785 ZNF382Q96SR6 550 aa11.72□□□□□ -0.53
RFC4-206ENST00000427785 EBF4Q9BQW3 602 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms