RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 DOK6Q6PKX4 331 aa25.9■■□□□ 1.74
SH3GL3-202ENST00000427482 AGTRAPQ6RW13 159 aa25.9■■□□□ 1.74
SH3GL3-202ENST00000427482 HACD2Q6Y1H2 254 aa25.9■■□□□ 1.74
SH3GL3-202ENST00000427482 TP53I13Q8NBR0 393 aaPredicted RBP25.9■■□□□ 1.74
SH3GL3-202ENST00000427482 STMN2Q93045 179 aa25.9■■□□□ 1.74
SH3GL3-202ENST00000427482 PPP3R2Q96LZ3 170 aa25.9■■□□□ 1.74
SH3GL3-202ENST00000427482 PKP4Q99569 1192 aa25.9■■□□□ 1.74
SH3GL3-202ENST00000427482 DPEP2Q9H4A9 486 aa25.9■■□□□ 1.74
SH3GL3-202ENST00000427482 POMPQ9Y244 141 aa25.9■■□□□ 1.74
SH3GL3-202ENST00000427482 H0Y3Z8 333 aa25.89■■□□□ 1.74
SH3GL3-202ENST00000427482 KRT6AP02538 564 aa25.89■■□□□ 1.74
SH3GL3-202ENST00000427482 KRT6BP04259 564 aa25.89■■□□□ 1.74
SH3GL3-202ENST00000427482 KRT6CP48668 564 aa25.89■■□□□ 1.74
SH3GL3-202ENST00000427482 NFE2L1Q14494 772 aa25.89■■□□□ 1.74
SH3GL3-202ENST00000427482 AP5B1Q2VPB7 878 aa25.89■■□□□ 1.74
SH3GL3-202ENST00000427482 PIGGQ5H8A4 983 aa25.89■■□□□ 1.74
SH3GL3-202ENST00000427482 KIAA1161Q6NSJ0 714 aa25.89■■□□□ 1.74
SH3GL3-202ENST00000427482 BLOC1S3Q6QNY0 202 aa25.89■■□□□ 1.74
SH3GL3-202ENST00000427482 CCDC124Q96CT7 223 aaKnown RBP25.89■■□□□ 1.74
SH3GL3-202ENST00000427482 C1QTNF2Q9BXJ5 285 aa25.89■■□□□ 1.74
SH3GL3-202ENST00000427482 ZIM2Q9NZV7 527 aa25.89■■□□□ 1.74
SH3GL3-202ENST00000427482 LIMD1Q9UGP4 676 aa25.89■■□□□ 1.74
SH3GL3-202ENST00000427482 PCDHGA7Q9Y5G6 932 aa25.89■■□□□ 1.74
SH3GL3-202ENST00000427482 CFLARO15519 480 aa25.88■■□□□ 1.73
SH3GL3-202ENST00000427482 CAPN3P20807 821 aa25.88■■□□□ 1.73
SH3GL3-202ENST00000427482 IMPA1P29218 277 aa25.88■■□□□ 1.73
SH3GL3-202ENST00000427482 MRPS21P82921 87 aaKnown RBP25.88■■□□□ 1.73
SH3GL3-202ENST00000427482 SMU1Q2TAY7 513 aa25.88■■□□□ 1.73
SH3GL3-202ENST00000427482 TMEM259Q4ZIN3 620 aa25.88■■□□□ 1.73
SH3GL3-202ENST00000427482 OR14C36Q8NHC7 312 aa25.88■■□□□ 1.73
SH3GL3-202ENST00000427482 TSPEARQ8WU66 669 aa25.88■■□□□ 1.73
SH3GL3-202ENST00000427482 MAGEB10Q96LZ2 347 aaPredicted RBP25.88■■□□□ 1.73
SH3GL3-202ENST00000427482 TMEM45AQ9NWC5 275 aa25.88■■□□□ 1.73
SH3GL3-202ENST00000427482 NDUFAF1Q9Y375 327 aa25.88■■□□□ 1.73
SH3GL3-202ENST00000427482 ADPRHP54922 357 aa25.88■■□□□ 1.73
SH3GL3-202ENST00000427482 PSME3P61289 254 aa25.88■■□□□ 1.73
SH3GL3-202ENST00000427482 INPP5AQ14642 412 aa25.88■■□□□ 1.73
SH3GL3-202ENST00000427482 CPSF6Q16630 551 aaKnown RBP eCLIP25.88■■□□□ 1.73
SH3GL3-202ENST00000427482 FAM83HQ6ZRV2 1179 aaPredicted RBP25.88■■□□□ 1.73
SH3GL3-202ENST00000427482 LRRTM4Q86VH4 590 aa25.88■■□□□ 1.73
SH3GL3-202ENST00000427482 THOC6Q86W42 341 aaKnown RBP25.88■■□□□ 1.73
SH3GL3-202ENST00000427482 OR56A3Q8NH54 315 aa25.88■■□□□ 1.73
SH3GL3-202ENST00000427482 SLC52A3Q9NQ40 469 aa25.88■■□□□ 1.73
SH3GL3-202ENST00000427482 ZNHIT2Q9UHR6 403 aa25.88■■□□□ 1.73
SH3GL3-202ENST00000427482 SCML1Q9UN30 329 aa25.88■■□□□ 1.73
SH3GL3-202ENST00000427482 PRKAB1Q9Y478 270 aa25.88■■□□□ 1.73
SH3GL3-202ENST00000427482 PRAMEF4O60810 478 aa25.87■■□□□ 1.73
SH3GL3-202ENST00000427482 SLC16A8O95907 504 aa25.87■■□□□ 1.73
SH3GL3-202ENST00000427482 PAK4O96013 591 aaPredicted RBP25.87■■□□□ 1.73
SH3GL3-202ENST00000427482 TRIM23P36406 574 aa25.87■■□□□ 1.73
SH3GL3-202ENST00000427482 ZFP36L2P47974 494 aaKnown RBP25.87■■□□□ 1.73
SH3GL3-202ENST00000427482 UFM1P61960 85 aa25.87■■□□□ 1.73
SH3GL3-202ENST00000427482 RCN1Q15293 331 aa25.87■■□□□ 1.73
SH3GL3-202ENST00000427482 ZNF423Q2M1K9 1284 aa25.87■■□□□ 1.73
SH3GL3-202ENST00000427482 SGO1Q5FBB7 561 aa25.87■■□□□ 1.73
SH3GL3-202ENST00000427482 PRAMEF9Q5VWM5 478 aa25.87■■□□□ 1.73
SH3GL3-202ENST00000427482 RETREG3Q86VR2 466 aa25.87■■□□□ 1.73
SH3GL3-202ENST00000427482 KLK6Q92876 244 aa25.87■■□□□ 1.73
SH3GL3-202ENST00000427482 TEX37Q96LM6 180 aa25.87■■□□□ 1.73
SH3GL3-202ENST00000427482 WDR26Q9H7D7 661 aa25.87■■□□□ 1.73
SH3GL3-202ENST00000427482 INTS7Q9NVH2 962 aaKnown RBP25.87■■□□□ 1.73
SH3GL3-202ENST00000427482 NOP53Q9NZM5 478 aaKnown RBP25.87■■□□□ 1.73
SH3GL3-202ENST00000427482 SNX6Q9UNH7 406 aa25.87■■□□□ 1.73
SH3GL3-202ENST00000427482 MYO10Q9HD67 2058 aa25.87■■□□□ 1.73
SH3GL3-202ENST00000427482 A0A1W2PQU0 124 aa25.86■■□□□ 1.73
SH3GL3-202ENST00000427482 C9JVG2 144 aa25.86■■□□□ 1.73
SH3GL3-202ENST00000427482 RNGTTO60942 597 aaKnown RBP25.86■■□□□ 1.73
SH3GL3-202ENST00000427482 SLC22A3O75751 556 aa25.86■■□□□ 1.73
SH3GL3-202ENST00000427482 ACADLP28330 430 aa25.86■■□□□ 1.73
SH3GL3-202ENST00000427482 THOP1P52888 689 aa25.86■■□□□ 1.73
SH3GL3-202ENST00000427482 SMAD4Q13485 552 aaKnown RBP25.86■■□□□ 1.73
SH3GL3-202ENST00000427482 NAE1Q13564 534 aa25.86■■□□□ 1.73
SH3GL3-202ENST00000427482 RCAN2Q14206 197 aa25.86■■□□□ 1.73
SH3GL3-202ENST00000427482 RFTN2Q52LD8 501 aaPredicted RBP25.86■■□□□ 1.73
SH3GL3-202ENST00000427482 SLC44A4Q53GD3 710 aa25.86■■□□□ 1.73
SH3GL3-202ENST00000427482 IER5LQ5T953 404 aa25.86■■□□□ 1.73
SH3GL3-202ENST00000427482 C8orf82Q6P1X6 216 aaPredicted RBP25.86■■□□□ 1.73
SH3GL3-202ENST00000427482 AMZ2Q86W34 360 aa25.86■■□□□ 1.73
SH3GL3-202ENST00000427482 OXR1Q8N573 874 aa25.86■■□□□ 1.73
SH3GL3-202ENST00000427482 PCYOX1LQ8NBM8 494 aa25.86■■□□□ 1.73
SH3GL3-202ENST00000427482 ROPN1LQ96C74 230 aa25.86■■□□□ 1.73
SH3GL3-202ENST00000427482 SLC45A3Q96JT2 553 aa25.86■■□□□ 1.73
SH3GL3-202ENST00000427482 OR52A5Q9H2C5 316 aa25.86■■□□□ 1.73
SH3GL3-202ENST00000427482 CIDEBQ9UHD4 219 aa25.86■■□□□ 1.73
SH3GL3-202ENST00000427482 PACSIN3Q9UKS6 424 aa25.86■■□□□ 1.73
SH3GL3-202ENST00000427482 UNC80Q8N2C7 3258 aa25.86■■□□□ 1.73
SH3GL3-202ENST00000427482 PRR23AA6NEV1 266 aa25.86■■□□□ 1.73
SH3GL3-202ENST00000427482 MBTPS2O43462 519 aa25.86■■□□□ 1.73
SH3GL3-202ENST00000427482 UGDHO60701 494 aa25.86■■□□□ 1.73
SH3GL3-202ENST00000427482 C7P10643 843 aa25.86■■□□□ 1.73
SH3GL3-202ENST00000427482 HMGCS1Q01581 520 aa25.86■■□□□ 1.73
SH3GL3-202ENST00000427482 RPA4Q13156 261 aa25.86■■□□□ 1.73
SH3GL3-202ENST00000427482 CHIT1Q13231 466 aa25.86■■□□□ 1.73
SH3GL3-202ENST00000427482 SGCGQ13326 291 aa25.86■■□□□ 1.73
SH3GL3-202ENST00000427482 CEACAM7Q14002 265 aa25.86■■□□□ 1.73
SH3GL3-202ENST00000427482 VPS26BQ4G0F5 336 aa25.86■■□□□ 1.73
SH3GL3-202ENST00000427482 COQ5Q5HYK3 327 aa25.86■■□□□ 1.73
SH3GL3-202ENST00000427482 RGL4Q8IZJ4 473 aa25.86■■□□□ 1.73
SH3GL3-202ENST00000427482 OSBPL6Q9BZF3 934 aa25.86■■□□□ 1.73
SH3GL3-202ENST00000427482 POLR3HQ9Y535 204 aaPredicted RBP25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms