RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 FAM25CB3EWG5 89 aa13.58□□□□□ -0.24
RPL28-202ENST00000426763 FAM25GB3EWG6 89 aa13.58□□□□□ -0.24
RPL28-202ENST00000426763 SLC22A2O15244 555 aa13.58□□□□□ -0.24
RPL28-202ENST00000426763 IFNGP01579 166 aa13.58□□□□□ -0.24
RPL28-202ENST00000426763 IL12BP29460 328 aa13.58□□□□□ -0.24
RPL28-202ENST00000426763 OXTRP30559 389 aa13.58□□□□□ -0.24
RPL28-202ENST00000426763 KHKP50053 298 aa13.58□□□□□ -0.24
RPL28-202ENST00000426763 TAS2R50P59544 299 aa13.58□□□□□ -0.24
RPL28-202ENST00000426763 RALGDSQ12967 914 aa13.58□□□□□ -0.24
RPL28-202ENST00000426763 FAM174BQ3ZCQ3 159 aa13.58□□□□□ -0.24
RPL28-202ENST00000426763 KLHDC10Q6PID8 442 aa13.58□□□□□ -0.24
RPL28-202ENST00000426763 TMEM25Q86YD3 366 aa13.58□□□□□ -0.24
RPL28-202ENST00000426763 GJD3Q8N144 294 aa13.58□□□□□ -0.24
RPL28-202ENST00000426763 C3orf58Q8NDZ4 430 aa13.58□□□□□ -0.24
RPL28-202ENST00000426763 GSTCDQ8NEC7 633 aa13.58□□□□□ -0.24
RPL28-202ENST00000426763 GLYATL1Q969I3 302 aa13.58□□□□□ -0.24
RPL28-202ENST00000426763 OR2M4Q96R27 311 aa13.58□□□□□ -0.24
RPL28-202ENST00000426763 PPM1HQ9ULR3 514 aa13.58□□□□□ -0.24
RPL28-202ENST00000426763 SAP18O00422 153 aaKnown RBP13.58□□□□□ -0.24
RPL28-202ENST00000426763 SCELO95171 688 aa13.58□□□□□ -0.24
RPL28-202ENST00000426763 F7P08709 466 aaPredicted RBP13.58□□□□□ -0.24
RPL28-202ENST00000426763 PTX3P26022 381 aaPredicted RBP13.58□□□□□ -0.24
RPL28-202ENST00000426763 PTPRCAPQ14761 206 aa13.58□□□□□ -0.24
RPL28-202ENST00000426763 PHF19Q5T6S3 580 aa13.58□□□□□ -0.24
RPL28-202ENST00000426763 MRPL43Q8N983 215 aaKnown RBP13.58□□□□□ -0.24
RPL28-202ENST00000426763 RBM15BQ8NDT2 890 aaKnown RBP13.58□□□□□ -0.24
RPL28-202ENST00000426763 OR9A1PQ8NGU1 263 aa13.58□□□□□ -0.24
RPL28-202ENST00000426763 KIAA1191Q96A73 305 aa13.58□□□□□ -0.24
RPL28-202ENST00000426763 WDR92Q96MX6 357 aa13.58□□□□□ -0.24
RPL28-202ENST00000426763 NEK6Q9HC98 313 aa13.58□□□□□ -0.24
RPL28-202ENST00000426763 SLCO3A1Q9UIG8 710 aa13.58□□□□□ -0.24
RPL28-202ENST00000426763 CACNA1SQ13698 1873 aa13.58□□□□□ -0.24
RPL28-202ENST00000426763 FAM234BA2RU67 622 aa13.58□□□□□ -0.24
RPL28-202ENST00000426763 GSC2O15499 205 aa13.58□□□□□ -0.24
RPL28-202ENST00000426763 LAMTOR5O43504 91 aa13.58□□□□□ -0.24
RPL28-202ENST00000426763 TGFB1P01137 390 aa13.58□□□□□ -0.24
RPL28-202ENST00000426763 MPIP34949 423 aa13.58□□□□□ -0.24
RPL28-202ENST00000426763 ST13P50502 369 aaKnown RBP13.58□□□□□ -0.24
RPL28-202ENST00000426763 RPL6Q02878 288 aaKnown RBP13.58□□□□□ -0.24
RPL28-202ENST00000426763 ZBTB6Q15916 424 aa13.58□□□□□ -0.24
RPL28-202ENST00000426763 FBXO43Q4G163 708 aa13.58□□□□□ -0.24
RPL28-202ENST00000426763 AGTRAPQ6RW13 159 aa13.58□□□□□ -0.24
RPL28-202ENST00000426763 APCDD1Q8J025 514 aa13.58□□□□□ -0.24
RPL28-202ENST00000426763 OR2T34Q8NGX1 318 aa13.58□□□□□ -0.24
RPL28-202ENST00000426763 OR2T3Q8NH03 318 aa13.58□□□□□ -0.24
RPL28-202ENST00000426763 R3HDMLQ9H3Y0 253 aa13.58□□□□□ -0.24
RPL28-202ENST00000426763 PRKAB1Q9Y478 270 aa13.58□□□□□ -0.24
RPL28-202ENST00000426763 MYH11P35749 1972 aa13.58□□□□□ -0.24
RPL28-202ENST00000426763 LRP5O75197 1615 aa13.57□□□□□ -0.24
RPL28-202ENST00000426763 C9JVG2 144 aa13.57□□□□□ -0.24
RPL28-202ENST00000426763 NDUFS4O43181 175 aa13.57□□□□□ -0.24
RPL28-202ENST00000426763 IFNW1P05000 195 aa13.57□□□□□ -0.24
RPL28-202ENST00000426763 PRPS1L1P21108 318 aa13.57□□□□□ -0.24
RPL28-202ENST00000426763 SERPINB1P30740 379 aa13.57□□□□□ -0.24
RPL28-202ENST00000426763 TIMM50Q3ZCQ8 353 aa13.57□□□□□ -0.24
RPL28-202ENST00000426763 TIFABQ6ZNK6 161 aa13.57□□□□□ -0.24
RPL28-202ENST00000426763 SCD5Q86SK9 330 aa13.57□□□□□ -0.24
RPL28-202ENST00000426763 RASGRP3Q8IV61 690 aa13.57□□□□□ -0.24
RPL28-202ENST00000426763 MYDGFQ969H8 173 aa13.57□□□□□ -0.24
RPL28-202ENST00000426763 ALG2Q9H553 416 aa13.57□□□□□ -0.24
RPL28-202ENST00000426763 SLC24A3Q9HC58 644 aa13.57□□□□□ -0.24
RPL28-202ENST00000426763 C15orf41Q9Y2V0 281 aa13.57□□□□□ -0.24
RPL28-202ENST00000426763 ERI3O43414 337 aaKnown RBP13.57□□□□□ -0.24
RPL28-202ENST00000426763 TOP3BO95985 862 aaKnown RBP13.57□□□□□ -0.24
RPL28-202ENST00000426763 PRG2P13727 222 aa13.57□□□□□ -0.24
RPL28-202ENST00000426763 GJA8P48165 433 aa13.57□□□□□ -0.24
RPL28-202ENST00000426763 KCNC3Q14003 757 aa13.57□□□□□ -0.24
RPL28-202ENST00000426763 SLC8B1Q6J4K2 584 aa13.57□□□□□ -0.24
RPL28-202ENST00000426763 ZNF730Q6ZMV8 503 aa13.57□□□□□ -0.24
RPL28-202ENST00000426763 SPPL2CQ8IUH8 684 aa13.57□□□□□ -0.24
RPL28-202ENST00000426763 BPIFB6Q8NFQ5 453 aa13.57□□□□□ -0.24
RPL28-202ENST00000426763 C5orf34Q96MH7 638 aa13.57□□□□□ -0.24
RPL28-202ENST00000426763 RANBP9Q96S59 729 aa13.57□□□□□ -0.24
RPL28-202ENST00000426763 G3V2T6 193 aa13.57□□□□□ -0.24
RPL28-202ENST00000426763 TULP3O75386 442 aa13.57□□□□□ -0.24
RPL28-202ENST00000426763 PIM1P11309 404 aaPredicted RBP13.57□□□□□ -0.24
RPL28-202ENST00000426763 EN2P19622 333 aaPredicted RBP13.57□□□□□ -0.24
RPL28-202ENST00000426763 SLC10A2Q12908 348 aaPredicted RBP13.57□□□□□ -0.24
RPL28-202ENST00000426763 ABRAXAS1Q6UWZ7 409 aa13.57□□□□□ -0.24
RPL28-202ENST00000426763 COX18Q8N8Q8 333 aa13.57□□□□□ -0.24
RPL28-202ENST00000426763 TXNDC5Q8NBS9 432 aaKnown RBP13.57□□□□□ -0.24
RPL28-202ENST00000426763 MAPK15Q8TD08 544 aa13.57□□□□□ -0.24
RPL28-202ENST00000426763 SETD7Q8WTS6 366 aaKnown RBP13.57□□□□□ -0.24
RPL28-202ENST00000426763 CDH22Q9UJ99 828 aa13.57□□□□□ -0.24
RPL28-202ENST00000426763 C5AR1P21730 350 aa13.57□□□□□ -0.24
RPL28-202ENST00000426763 CD70P32970 193 aa13.57□□□□□ -0.24
RPL28-202ENST00000426763 PGDP52209 483 aa13.57□□□□□ -0.24
RPL28-202ENST00000426763 BNC1Q01954 994 aa13.57□□□□□ -0.24
RPL28-202ENST00000426763 UAP1L1Q3KQV9 507 aa13.57□□□□□ -0.24
RPL28-202ENST00000426763 TRIM74Q86UV6 250 aa13.57□□□□□ -0.24
RPL28-202ENST00000426763 HEATR4Q86WZ0 1026 aa13.57□□□□□ -0.24
RPL28-202ENST00000426763 SORCS1Q8WY21 1168 aa13.57□□□□□ -0.24
RPL28-202ENST00000426763 SCAMP4Q969E2 229 aa13.57□□□□□ -0.24
RPL28-202ENST00000426763 NDC1Q9BTX1 674 aa13.57□□□□□ -0.24
RPL28-202ENST00000426763 SMIM31A0A1B0GVY4 71 aa13.56□□□□□ -0.24
RPL28-202ENST00000426763 A0A1W2PQU0 124 aa13.56□□□□□ -0.24
RPL28-202ENST00000426763 DLX3O60479 287 aa13.56□□□□□ -0.24
RPL28-202ENST00000426763 STX11O75558 287 aa13.56□□□□□ -0.24
RPL28-202ENST00000426763 FABP3P05413 133 aa13.56□□□□□ -0.24
RPL28-202ENST00000426763 CSNK2A2P19784 350 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms