RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 POMT2Q9UKY4 750 aa12.33□□□□□ -0.44
SGCE-203ENST00000425444 POLHQ9Y253 713 aa12.33□□□□□ -0.44
SGCE-203ENST00000425444 TDRKHQ9Y2W6 561 aaKnown RBP12.33□□□□□ -0.44
SGCE-203ENST00000425444 GOLGA6L10A0A0M3HER8 536 aa12.32□□□□□ -0.44
SGCE-203ENST00000425444 TCRBV7S3A2A0A539 114 aa12.32□□□□□ -0.44
SGCE-203ENST00000425444 BTN3A1O00481 513 aa12.32□□□□□ -0.44
SGCE-203ENST00000425444 CD3EAPO15446 510 aaKnown RBP12.32□□□□□ -0.44
SGCE-203ENST00000425444 MAP3K7O43318 606 aa12.32□□□□□ -0.44
SGCE-203ENST00000425444 KRT14P02533 472 aa12.32□□□□□ -0.44
SGCE-203ENST00000425444 CCNYL3P0C7X3 344 aa12.32□□□□□ -0.44
SGCE-203ENST00000425444 FOLR1P15328 257 aa12.32□□□□□ -0.44
SGCE-203ENST00000425444 NMBRP28336 390 aa12.32□□□□□ -0.44
SGCE-203ENST00000425444 DLSTP36957 453 aa12.32□□□□□ -0.44
SGCE-203ENST00000425444 STAT5AP42229 794 aa12.32□□□□□ -0.44
SGCE-203ENST00000425444 HSPA14Q0VDF9 509 aa12.32□□□□□ -0.44
SGCE-203ENST00000425444 ERV3-1Q14264 604 aa12.32□□□□□ -0.44
SGCE-203ENST00000425444 TMED2Q15363 201 aa12.32□□□□□ -0.44
SGCE-203ENST00000425444 NADK2Q4G0N4 442 aa12.32□□□□□ -0.44
SGCE-203ENST00000425444 PTRHD1Q6GMV3 140 aaKnown RBP12.32□□□□□ -0.44
SGCE-203ENST00000425444 TTC27Q6P3X3 843 aa12.32□□□□□ -0.44
SGCE-203ENST00000425444 CASC4Q6P4E1 433 aa12.32□□□□□ -0.44
SGCE-203ENST00000425444 FBXO38Q6PIJ6 1188 aa12.32□□□□□ -0.44
SGCE-203ENST00000425444 LDB1Q86U70 411 aaPredicted RBP12.32□□□□□ -0.44
SGCE-203ENST00000425444 AMIGO1Q86WK6 493 aa12.32□□□□□ -0.44
SGCE-203ENST00000425444 CARFQ8N187 725 aa12.32□□□□□ -0.44
SGCE-203ENST00000425444 OR5AR1Q8NGP9 310 aa12.32□□□□□ -0.44
SGCE-203ENST00000425444 SGSM3Q96HU1 749 aa12.32□□□□□ -0.44
SGCE-203ENST00000425444 C5orf34Q96MH7 638 aa12.32□□□□□ -0.44
SGCE-203ENST00000425444 PPM1MQ96MI6 270 aa12.32□□□□□ -0.44
SGCE-203ENST00000425444 SLC29A3Q9BZD2 475 aa12.32□□□□□ -0.44
SGCE-203ENST00000425444 TFB2MQ9H5Q4 396 aaKnown RBP12.32□□□□□ -0.44
SGCE-203ENST00000425444 TRMT1Q9NXH9 659 aaKnown RBP12.32□□□□□ -0.44
SGCE-203ENST00000425444 RPS6KL1Q9Y6S9 549 aa12.32□□□□□ -0.44
SGCE-203ENST00000425444 SLC5A10A0PJK1 596 aa12.31□□□□□ -0.44
SGCE-203ENST00000425444 ARHGAP10A1A4S6 786 aa12.31□□□□□ -0.44
SGCE-203ENST00000425444 SLC9B1P1A6NJY1 282 aa12.31□□□□□ -0.44
SGCE-203ENST00000425444 C2orf74A8MZ97 194 aa12.31□□□□□ -0.44
SGCE-203ENST00000425444 BTN3A3O00478 584 aa12.31□□□□□ -0.44
SGCE-203ENST00000425444 PRMT5O14744 637 aaPredicted RBP12.31□□□□□ -0.44
SGCE-203ENST00000425444 HNRNPRO43390 633 aaKnown RBP12.31□□□□□ -0.44
SGCE-203ENST00000425444 KDM1AO60341 852 aa12.31□□□□□ -0.44
SGCE-203ENST00000425444 NDUFS3O75489 264 aa12.31□□□□□ -0.44
SGCE-203ENST00000425444 MT-ND3P03897 115 aa12.31□□□□□ -0.44
SGCE-203ENST00000425444 APOA4P06727 396 aa12.31□□□□□ -0.44
SGCE-203ENST00000425444 FURINP09958 794 aa12.31□□□□□ -0.44
SGCE-203ENST00000425444 F8A1P23610 371 aa12.31□□□□□ -0.44
SGCE-203ENST00000425444 SHMT2P34897 504 aa12.31□□□□□ -0.44
SGCE-203ENST00000425444 COILP38432 576 aaPredicted RBP12.31□□□□□ -0.44
SGCE-203ENST00000425444 PMS2P54278 862 aa12.31□□□□□ -0.44
SGCE-203ENST00000425444 TUBB4BP68371 445 aa12.31□□□□□ -0.44
SGCE-203ENST00000425444 TUBB2AQ13885 445 aa12.31□□□□□ -0.44
SGCE-203ENST00000425444 KCNJ11Q14654 390 aa12.31□□□□□ -0.44
SGCE-203ENST00000425444 INPP5JQ15735 1006 aaPredicted RBP12.31□□□□□ -0.44
SGCE-203ENST00000425444 GPR19Q15760 415 aa12.31□□□□□ -0.44
SGCE-203ENST00000425444 PRR30Q53SZ7 412 aaPredicted RBP12.31□□□□□ -0.44
SGCE-203ENST00000425444 PWWP2BQ6NUJ5 590 aa12.31□□□□□ -0.44
SGCE-203ENST00000425444 CCDC137Q6PK04 289 aaKnown RBP12.31□□□□□ -0.44
SGCE-203ENST00000425444 CES3Q6UWW8 571 aa12.31□□□□□ -0.44
SGCE-203ENST00000425444 TMEM126BQ8IUX1 230 aa12.31□□□□□ -0.44
SGCE-203ENST00000425444 D2HGDHQ8N465 521 aa12.31□□□□□ -0.44
SGCE-203ENST00000425444 OR5K2Q8NHB8 316 aa12.31□□□□□ -0.44
SGCE-203ENST00000425444 GSDMBQ8TAX9 411 aa12.31□□□□□ -0.44
SGCE-203ENST00000425444 OSBPL9Q96SU4 736 aa12.31□□□□□ -0.44
SGCE-203ENST00000425444 NRTNQ99748 197 aa12.31□□□□□ -0.44
SGCE-203ENST00000425444 TUBB2BQ9BVA1 445 aa12.31□□□□□ -0.44
SGCE-203ENST00000425444 MRM3Q9HC36 420 aaKnown RBP12.31□□□□□ -0.44
SGCE-203ENST00000425444 C1GALT1Q9NS00 363 aa12.31□□□□□ -0.44
SGCE-203ENST00000425444 TREX1Q9NSU2 369 aa12.31□□□□□ -0.44
SGCE-203ENST00000425444 ACTR10Q9NZ32 417 aa12.31□□□□□ -0.44
SGCE-203ENST00000425444 SAMD15Q9P1V8 674 aa12.31□□□□□ -0.44
SGCE-203ENST00000425444 MARCH4Q9P2E8 410 aaPredicted RBP12.31□□□□□ -0.44
SGCE-203ENST00000425444 POLG2Q9UHN1 485 aa12.31□□□□□ -0.44
SGCE-203ENST00000425444 GNPTGQ9UJJ9 305 aa12.31□□□□□ -0.44
SGCE-203ENST00000425444 CROTQ9UKG9 612 aa12.31□□□□□ -0.44
SGCE-203ENST00000425444 PKDREJQ9NTG1 2253 aa12.3□□□□□ -0.44
SGCE-203ENST00000425444 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.3□□□□□ -0.44
SGCE-203ENST00000425444 IQCF5A8MTL0 148 aa12.3□□□□□ -0.44
SGCE-203ENST00000425444 PFDN6O15212 129 aa12.3□□□□□ -0.44
SGCE-203ENST00000425444 PHF2O75151 1096 aa12.3□□□□□ -0.44
SGCE-203ENST00000425444 KATNA1O75449 491 aa12.3□□□□□ -0.44
SGCE-203ENST00000425444 SCRG1O75711 98 aa12.3□□□□□ -0.44
SGCE-203ENST00000425444 DNAJB5O75953 348 aa12.3□□□□□ -0.44
SGCE-203ENST00000425444 SORBS2O94875 1100 aaKnown RBP12.3□□□□□ -0.44
SGCE-203ENST00000425444 VAPBO95292 243 aa12.3□□□□□ -0.44
SGCE-203ENST00000425444 TIAF1O95411 115 aa12.3□□□□□ -0.44
SGCE-203ENST00000425444 PAMP19021 973 aa12.3□□□□□ -0.44
SGCE-203ENST00000425444 ACADLP28330 430 aa12.3□□□□□ -0.44
SGCE-203ENST00000425444 PRDX3P30048 256 aaKnown RBP12.3□□□□□ -0.44
SGCE-203ENST00000425444 CCR7P32248 378 aa12.3□□□□□ -0.44
SGCE-203ENST00000425444 ANKRD22Q5VYY1 191 aa12.3□□□□□ -0.44
SGCE-203ENST00000425444 MRNIPQ6NTE8 343 aa12.3□□□□□ -0.44
SGCE-203ENST00000425444 SDCCAG8Q86SQ7 713 aaPredicted RBP12.3□□□□□ -0.44
SGCE-203ENST00000425444 BPHLQ86WA6 291 aaPredicted RBP12.3□□□□□ -0.44
SGCE-203ENST00000425444 REXO1L1PQ8IX06 675 aa12.3□□□□□ -0.44
SGCE-203ENST00000425444 TBC1D21Q8IYX1 336 aa12.3□□□□□ -0.44
SGCE-203ENST00000425444 KRT222Q8N1A0 295 aa12.3□□□□□ -0.44
SGCE-203ENST00000425444 MPP5Q8N3R9 675 aa12.3□□□□□ -0.44
SGCE-203ENST00000425444 CFAP61Q8NHU2 1237 aa12.3□□□□□ -0.44
SGCE-203ENST00000425444 LKAAEAR1Q8TD35 194 aa12.3□□□□□ -0.44
SGCE-203ENST00000425444 GRK7Q8WTQ7 553 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms