RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 ASTE1Q2TB18 679 aaPredicted RBP11.82□□□□□ -0.52
HLA-DQB3-203ENST00000425319 TUBB8Q3ZCM7 444 aa11.82□□□□□ -0.52
HLA-DQB3-203ENST00000425319 ZNF789Q5FWF6 425 aa11.82□□□□□ -0.52
HLA-DQB3-203ENST00000425319 FAM69BQ5VUD6 431 aa11.82□□□□□ -0.52
HLA-DQB3-203ENST00000425319 ISLR2Q6UXK2 745 aa11.82□□□□□ -0.52
HLA-DQB3-203ENST00000425319 TTLL10Q6ZVT0 673 aa11.82□□□□□ -0.52
HLA-DQB3-203ENST00000425319 BBS12Q6ZW61 710 aa11.82□□□□□ -0.52
HLA-DQB3-203ENST00000425319 CNGA4Q8IV77 575 aa11.82□□□□□ -0.52
HLA-DQB3-203ENST00000425319 BCORP1Q8N888 145 aa11.82□□□□□ -0.52
HLA-DQB3-203ENST00000425319 OR13C4Q8NGS5 318 aa11.82□□□□□ -0.52
HLA-DQB3-203ENST00000425319 OR5K2Q8NHB8 316 aa11.82□□□□□ -0.52
HLA-DQB3-203ENST00000425319 SUN3Q8TAQ9 357 aa11.82□□□□□ -0.52
HLA-DQB3-203ENST00000425319 MARVELD3Q96A59 401 aa11.82□□□□□ -0.52
HLA-DQB3-203ENST00000425319 OR2A14Q96R47 310 aa11.82□□□□□ -0.52
HLA-DQB3-203ENST00000425319 LMF1Q96S06 567 aa11.82□□□□□ -0.52
HLA-DQB3-203ENST00000425319 APOL2Q9BQE5 337 aa11.82□□□□□ -0.52
HLA-DQB3-203ENST00000425319 HEMGNQ9BXL5 484 aa11.82□□□□□ -0.52
HLA-DQB3-203ENST00000425319 WDR54Q9H977 334 aa11.82□□□□□ -0.52
HLA-DQB3-203ENST00000425319 SEMA3GQ9NS98 782 aa11.82□□□□□ -0.52
HLA-DQB3-203ENST00000425319 SPTLC3Q9NUV7 552 aa11.82□□□□□ -0.52
HLA-DQB3-203ENST00000425319 EURLQ9NYK6 297 aa11.82□□□□□ -0.52
HLA-DQB3-203ENST00000425319 ANAPC5Q9UJX4 755 aa11.82□□□□□ -0.52
HLA-DQB3-203ENST00000425319 SLC39A10Q9ULF5 831 aa11.82□□□□□ -0.52
HLA-DQB3-203ENST00000425319 CDYLQ9Y232 598 aa11.82□□□□□ -0.52
HLA-DQB3-203ENST00000425319 EFR3BQ9Y2G0 817 aa11.82□□□□□ -0.52
HLA-DQB3-203ENST00000425319 HYOU1Q9Y4L1 999 aa11.82□□□□□ -0.52
HLA-DQB3-203ENST00000425319 PCDHGA10Q9Y5H3 936 aa11.82□□□□□ -0.52
HLA-DQB3-203ENST00000425319 A0A1B0GX78 115 aa11.81□□□□□ -0.52
HLA-DQB3-203ENST00000425319 ARHGAP10A1A4S6 786 aa11.81□□□□□ -0.52
HLA-DQB3-203ENST00000425319 FKBP9O95302 570 aa11.81□□□□□ -0.52
HLA-DQB3-203ENST00000425319 IPO7O95373 1038 aaKnown RBP11.81□□□□□ -0.52
HLA-DQB3-203ENST00000425319 RBP3P10745 1247 aa11.81□□□□□ -0.52
HLA-DQB3-203ENST00000425319 PTMSP20962 102 aa11.81□□□□□ -0.52
HLA-DQB3-203ENST00000425319 RBPJQ06330 500 aa11.81□□□□□ -0.52
HLA-DQB3-203ENST00000425319 ITIH4Q14624 930 aa11.81□□□□□ -0.52
HLA-DQB3-203ENST00000425319 SLC9A5Q14940 896 aa11.81□□□□□ -0.52
HLA-DQB3-203ENST00000425319 NAA25Q14CX7 972 aa11.81□□□□□ -0.52
HLA-DQB3-203ENST00000425319 BRD3Q15059 726 aa11.81□□□□□ -0.52
HLA-DQB3-203ENST00000425319 ZRSR2Q15696 482 aaKnown RBP11.81□□□□□ -0.52
HLA-DQB3-203ENST00000425319 PARP6Q2NL67 630 aa11.81□□□□□ -0.52
HLA-DQB3-203ENST00000425319 DNAJC21Q5F1R6 531 aaKnown RBP11.81□□□□□ -0.52
HLA-DQB3-203ENST00000425319 C1QL3Q5VWW1 255 aa11.81□□□□□ -0.52
HLA-DQB3-203ENST00000425319 ZNF385CQ66K41 422 aaPredicted RBP11.81□□□□□ -0.52
HLA-DQB3-203ENST00000425319 MRPL14Q6P1L8 145 aaKnown RBP11.81□□□□□ -0.52
HLA-DQB3-203ENST00000425319 ARHGEF18Q6ZSZ5 1173 aa11.81□□□□□ -0.52
HLA-DQB3-203ENST00000425319 LINC00523Q86TU6 105 aa11.81□□□□□ -0.52
HLA-DQB3-203ENST00000425319 CUZD1Q86UP6 607 aa11.81□□□□□ -0.52
HLA-DQB3-203ENST00000425319 MCATQ8IVS2 390 aaKnown RBP11.81□□□□□ -0.52
HLA-DQB3-203ENST00000425319 PARP9Q8IXQ6 854 aa11.81□□□□□ -0.52
HLA-DQB3-203ENST00000425319 DNAJC22Q8N4W6 341 aa11.81□□□□□ -0.52
HLA-DQB3-203ENST00000425319 LILRA3Q8N6C8 439 aaPredicted RBP11.81□□□□□ -0.52
HLA-DQB3-203ENST00000425319 OR5AR1Q8NGP9 310 aa11.81□□□□□ -0.52
HLA-DQB3-203ENST00000425319 GRHL3Q8TE85 626 aa11.81□□□□□ -0.52
HLA-DQB3-203ENST00000425319 THOC3Q96J01 351 aaKnown RBP11.81□□□□□ -0.52
HLA-DQB3-203ENST00000425319 ARNT2Q9HBZ2 717 aa11.81□□□□□ -0.52
HLA-DQB3-203ENST00000425319 FAM60AQ9NP50 221 aa11.81□□□□□ -0.52
HLA-DQB3-203ENST00000425319 ABHD10Q9NUJ1 306 aa11.81□□□□□ -0.52
HLA-DQB3-203ENST00000425319 NLE1Q9NVX2 485 aaPredicted RBP11.81□□□□□ -0.52
HLA-DQB3-203ENST00000425319 COPG2Q9UBF2 871 aa11.81□□□□□ -0.52
HLA-DQB3-203ENST00000425319 NOVA2Q9UNW9 492 aaKnown RBP11.81□□□□□ -0.52
HLA-DQB3-203ENST00000425319 LRRK2Q5S007 2527 aa11.81□□□□□ -0.52
HLA-DQB3-203ENST00000425319 NBASA2RRP1 2371 aa11.81□□□□□ -0.52
HLA-DQB3-203ENST00000425319 ESPL1Q14674 2120 aa11.8□□□□□ -0.52
HLA-DQB3-203ENST00000425319 PRSS44E7EML9 344 aa11.8□□□□□ -0.52
HLA-DQB3-203ENST00000425319 H7C0S8 307 aa11.8□□□□□ -0.52
HLA-DQB3-203ENST00000425319 PRPF4O43172 522 aaKnown RBP eCLIP11.8□□□□□ -0.52
HLA-DQB3-203ENST00000425319 SRPX2O60687 465 aaPredicted RBP11.8□□□□□ -0.52
HLA-DQB3-203ENST00000425319 S1PR4O95977 384 aa11.8□□□□□ -0.52
HLA-DQB3-203ENST00000425319 RNF224P0DH78 156 aa11.8□□□□□ -0.52
HLA-DQB3-203ENST00000425319 FDXRP22570 491 aa11.8□□□□□ -0.52
HLA-DQB3-203ENST00000425319 PSMB4P28070 264 aa11.8□□□□□ -0.52
HLA-DQB3-203ENST00000425319 ADRA1AP35348 466 aa11.8□□□□□ -0.52
HLA-DQB3-203ENST00000425319 HADHBP55084 474 aaKnown RBP11.8□□□□□ -0.52
HLA-DQB3-203ENST00000425319 ARG2P78540 354 aa11.8□□□□□ -0.52
HLA-DQB3-203ENST00000425319 SF1Q15637 639 aaKnown RBP11.8□□□□□ -0.52
HLA-DQB3-203ENST00000425319 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.8□□□□□ -0.52
HLA-DQB3-203ENST00000425319 DEFB110Q30KQ9 67 aa11.8□□□□□ -0.52
HLA-DQB3-203ENST00000425319 RPUSD3Q6P087 351 aaKnown RBP11.8□□□□□ -0.52
HLA-DQB3-203ENST00000425319 PPP1R32Q7Z5V6 425 aa11.8□□□□□ -0.52
HLA-DQB3-203ENST00000425319 CLDN19Q8N6F1 224 aa11.8□□□□□ -0.52
HLA-DQB3-203ENST00000425319 NAT14Q8WUY8 206 aa11.8□□□□□ -0.52
HLA-DQB3-203ENST00000425319 ASZ1Q8WWH4 475 aa11.8□□□□□ -0.52
HLA-DQB3-203ENST00000425319 ZUFSPQ96AP4 578 aa11.8□□□□□ -0.52
HLA-DQB3-203ENST00000425319 CDKN2AIPNLQ96HQ2 116 aa11.8□□□□□ -0.52
HLA-DQB3-203ENST00000425319 MAGEB10Q96LZ2 347 aaPredicted RBP11.8□□□□□ -0.52
HLA-DQB3-203ENST00000425319 SPATA13Q96N96 652 aa11.8□□□□□ -0.52
HLA-DQB3-203ENST00000425319 RANBP9Q96S59 729 aa11.8□□□□□ -0.52
HLA-DQB3-203ENST00000425319 CHP1Q99653 195 aa11.8□□□□□ -0.52
HLA-DQB3-203ENST00000425319 BARD1Q99728 777 aaKnown RBP11.8□□□□□ -0.52
HLA-DQB3-203ENST00000425319 RAB11FIP5Q9BXF6 653 aa11.8□□□□□ -0.52
HLA-DQB3-203ENST00000425319 LRRC40Q9H9A6 602 aa11.8□□□□□ -0.52
HLA-DQB3-203ENST00000425319 CHST11Q9NPF2 352 aa11.8□□□□□ -0.52
HLA-DQB3-203ENST00000425319 CUTCQ9NTM9 273 aa11.8□□□□□ -0.52
HLA-DQB3-203ENST00000425319 OLAHQ9NV23 265 aa11.8□□□□□ -0.52
HLA-DQB3-203ENST00000425319 FBXL4Q9UKA2 621 aa11.8□□□□□ -0.52
HLA-DQB3-203ENST00000425319 CDC14AQ9UNH5 594 aa11.8□□□□□ -0.52
HLA-DQB3-203ENST00000425319 ICKQ9UPZ9 632 aa11.8□□□□□ -0.52
HLA-DQB3-203ENST00000425319 FAM169AQ9Y6X4 670 aa11.8□□□□□ -0.52
HLA-DQB3-203ENST00000425319 COL12A1Q99715 3063 aa11.79□□□□□ -0.52
HLA-DQB3-203ENST00000425319 IGLV3-16A0A075B6K0 115 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms