RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 MASP2O00187 686 aa16.24■□□□□ 0.19
UPF3AP3-201ENST00000420996 QSOX1O00391 747 aa16.24■□□□□ 0.19
UPF3AP3-201ENST00000420996 CTSBP07858 339 aa16.24■□□□□ 0.19
UPF3AP3-201ENST00000420996 PRSS56P0CW18 603 aa16.24■□□□□ 0.19
UPF3AP3-201ENST00000420996 TPBGLP0DKB5 382 aa16.24■□□□□ 0.19
UPF3AP3-201ENST00000420996 ATXN8OSP0DMR3 200 aa16.24■□□□□ 0.19
UPF3AP3-201ENST00000420996 CTNNA2P26232 953 aa16.24■□□□□ 0.19
UPF3AP3-201ENST00000420996 CACNG1Q06432 222 aa16.24■□□□□ 0.19
UPF3AP3-201ENST00000420996 DBN1Q16643 649 aa16.24■□□□□ 0.19
UPF3AP3-201ENST00000420996 SLC5A12Q1EHB4 618 aa16.24■□□□□ 0.19
UPF3AP3-201ENST00000420996 MICALCLQ6ZW33 695 aa16.24■□□□□ 0.19
UPF3AP3-201ENST00000420996 TMTC1Q8IUR5 882 aa16.24■□□□□ 0.19
UPF3AP3-201ENST00000420996 CNGA4Q8IV77 575 aa16.24■□□□□ 0.19
UPF3AP3-201ENST00000420996 PIANPQ8IYJ0 282 aa16.24■□□□□ 0.19
UPF3AP3-201ENST00000420996 ST6GALNAC3Q8NDV1 305 aa16.24■□□□□ 0.19
UPF3AP3-201ENST00000420996 CDKN2AIPNLQ96HQ2 116 aa16.24■□□□□ 0.19
UPF3AP3-201ENST00000420996 NDC1Q9BTX1 674 aa16.24■□□□□ 0.19
UPF3AP3-201ENST00000420996 SMARCAL1Q9NZC9 954 aa16.24■□□□□ 0.19
UPF3AP3-201ENST00000420996 TDRKHQ9Y2W6 561 aaKnown RBP16.24■□□□□ 0.19
UPF3AP3-201ENST00000420996 CRYBG3Q68DQ2 2970 aa16.24■□□□□ 0.19
UPF3AP3-201ENST00000420996 CELSR2Q9HCU4 2923 aa16.24■□□□□ 0.19
UPF3AP3-201ENST00000420996 MACROD2A1Z1Q3 448 aa16.23■□□□□ 0.19
UPF3AP3-201ENST00000420996 PJA2O43164 708 aa16.23■□□□□ 0.19
UPF3AP3-201ENST00000420996 AP2A1O95782 977 aa16.23■□□□□ 0.19
UPF3AP3-201ENST00000420996 FTH1P02794 183 aa16.23■□□□□ 0.19
UPF3AP3-201ENST00000420996 PTPN7P35236 360 aa16.23■□□□□ 0.19
UPF3AP3-201ENST00000420996 NSG1P42857 185 aa16.23■□□□□ 0.19
UPF3AP3-201ENST00000420996 FOXL2P58012 376 aa16.23■□□□□ 0.19
UPF3AP3-201ENST00000420996 PLOD1Q02809 727 aaPredicted RBP16.23■□□□□ 0.19
UPF3AP3-201ENST00000420996 SLC9A5Q14940 896 aa16.23■□□□□ 0.19
UPF3AP3-201ENST00000420996 KIR2DS3Q14952 304 aa16.23■□□□□ 0.19
UPF3AP3-201ENST00000420996 KCNMB4Q86W47 210 aa16.23■□□□□ 0.19
UPF3AP3-201ENST00000420996 TMEM151BQ8IW70 566 aa16.23■□□□□ 0.19
UPF3AP3-201ENST00000420996 OR5K2Q8NHB8 316 aa16.23■□□□□ 0.19
UPF3AP3-201ENST00000420996 STYXQ8WUJ0 223 aa16.23■□□□□ 0.19
UPF3AP3-201ENST00000420996 WDR77Q9BQA1 342 aaPredicted RBP16.23■□□□□ 0.19
UPF3AP3-201ENST00000420996 OSBPL8Q9BZF1 889 aa16.23■□□□□ 0.19
UPF3AP3-201ENST00000420996 SLC22A11Q9NSA0 550 aa16.23■□□□□ 0.19
UPF3AP3-201ENST00000420996 IRAK4Q9NWZ3 460 aa16.23■□□□□ 0.19
UPF3AP3-201ENST00000420996 PCDHA3Q9Y5H8 950 aa16.23■□□□□ 0.19
UPF3AP3-201ENST00000420996 CENPEQ02224 2701 aa16.23■□□□□ 0.19
UPF3AP3-201ENST00000420996 POLEQ07864 2286 aa16.22■□□□□ 0.19
UPF3AP3-201ENST00000420996 SLC5A10A0PJK1 596 aa16.22■□□□□ 0.19
UPF3AP3-201ENST00000420996 ISM1B1AKI9 464 aa16.22■□□□□ 0.19
UPF3AP3-201ENST00000420996 AKR1B15C9JRZ8 316 aaPredicted RBP16.22■□□□□ 0.19
UPF3AP3-201ENST00000420996 BHMG1C9JSJ3 638 aaPredicted RBP16.22■□□□□ 0.19
UPF3AP3-201ENST00000420996 KDM1AO60341 852 aa16.22■□□□□ 0.19
UPF3AP3-201ENST00000420996 ZNF189O75820 626 aaPredicted RBP16.22■□□□□ 0.19
UPF3AP3-201ENST00000420996 TPH1P17752 444 aa16.22■□□□□ 0.19
UPF3AP3-201ENST00000420996 MMP11P24347 488 aa16.22■□□□□ 0.19
UPF3AP3-201ENST00000420996 ITGA3P26006 1051 aa16.22■□□□□ 0.19
UPF3AP3-201ENST00000420996 ITIH4Q14624 930 aa16.22■□□□□ 0.19
UPF3AP3-201ENST00000420996 BRD3Q15059 726 aa16.22■□□□□ 0.19
UPF3AP3-201ENST00000420996 PRAMEF13Q5VWM6 474 aa16.22■□□□□ 0.19
UPF3AP3-201ENST00000420996 KCTD11Q693B1 232 aa16.22■□□□□ 0.19
UPF3AP3-201ENST00000420996 IGFL2Q6UWQ7 119 aa16.22■□□□□ 0.19
UPF3AP3-201ENST00000420996 PACS1Q6VY07 963 aa16.22■□□□□ 0.19
UPF3AP3-201ENST00000420996 SLC34A3Q8N130 599 aa16.22■□□□□ 0.19
UPF3AP3-201ENST00000420996 DENND1AQ8TEH3 1009 aa16.22■□□□□ 0.19
UPF3AP3-201ENST00000420996 PPP4R1Q8TF05 950 aa16.22■□□□□ 0.19
UPF3AP3-201ENST00000420996 COG1Q8WTW3 980 aa16.22■□□□□ 0.19
UPF3AP3-201ENST00000420996 ELMO1Q92556 727 aa16.22■□□□□ 0.19
UPF3AP3-201ENST00000420996 DLG3Q92796 817 aa16.22■□□□□ 0.19
UPF3AP3-201ENST00000420996 FKBP10Q96AY3 582 aa16.22■□□□□ 0.19
UPF3AP3-201ENST00000420996 FAM118BQ9BPY3 351 aa16.22■□□□□ 0.19
UPF3AP3-201ENST00000420996 SLC6A20Q9NP91 592 aa16.22■□□□□ 0.19
UPF3AP3-201ENST00000420996 EURLQ9NYK6 297 aa16.22■□□□□ 0.19
UPF3AP3-201ENST00000420996 PRSS21Q9Y6M0 314 aa16.22■□□□□ 0.19
UPF3AP3-201ENST00000420996 ONECUT2O95948 504 aa16.21■□□□□ 0.19
UPF3AP3-201ENST00000420996 ALBP02768 609 aa16.21■□□□□ 0.19
UPF3AP3-201ENST00000420996 PIM1P11309 404 aaPredicted RBP16.21■□□□□ 0.19
UPF3AP3-201ENST00000420996 ALAS2P22557 587 aa16.21■□□□□ 0.19
UPF3AP3-201ENST00000420996 PSMA3P25788 255 aa16.21■□□□□ 0.19
UPF3AP3-201ENST00000420996 PEBP1P30086 187 aaKnown RBP16.21■□□□□ 0.19
UPF3AP3-201ENST00000420996 CTNNA1P35221 906 aaKnown RBP16.21■□□□□ 0.19
UPF3AP3-201ENST00000420996 GCGRP47871 477 aa16.21■□□□□ 0.19
UPF3AP3-201ENST00000420996 ARSFP54793 590 aa16.21■□□□□ 0.19
UPF3AP3-201ENST00000420996 PARP6Q2NL67 630 aa16.21■□□□□ 0.19
UPF3AP3-201ENST00000420996 C1QL3Q5VWW1 255 aa16.21■□□□□ 0.19
UPF3AP3-201ENST00000420996 OVCH1Q7RTY7 1134 aa16.21■□□□□ 0.19
UPF3AP3-201ENST00000420996 ALS2CR12Q96Q35 445 aa16.21■□□□□ 0.19
UPF3AP3-201ENST00000420996 WDR54Q9H977 334 aa16.21■□□□□ 0.19
UPF3AP3-201ENST00000420996 FBXL4Q9UKA2 621 aa16.21■□□□□ 0.19
UPF3AP3-201ENST00000420996 NOVA2Q9UNW9 492 aaKnown RBP16.21■□□□□ 0.19
UPF3AP3-201ENST00000420996 TFR2Q9UP52 801 aa16.21■□□□□ 0.19
UPF3AP3-201ENST00000420996 PCDHA13Q9Y5I0 950 aa16.21■□□□□ 0.19
UPF3AP3-201ENST00000420996 CSAG2Q9Y5P2 127 aa16.21■□□□□ 0.19
UPF3AP3-201ENST00000420996 CROCCQ5TZA2 2017 aa16.2■□□□□ 0.18
UPF3AP3-201ENST00000420996 ITGAXP20702 1163 aa16.2■□□□□ 0.18
UPF3AP3-201ENST00000420996 PER3P56645 1201 aa16.2■□□□□ 0.18
UPF3AP3-201ENST00000420996 TBX2Q13207 712 aaPredicted RBP16.2■□□□□ 0.18
UPF3AP3-201ENST00000420996 POU6F1Q14863 301 aa16.2■□□□□ 0.18
UPF3AP3-201ENST00000420996 HIF1AQ16665 826 aa16.2■□□□□ 0.18
UPF3AP3-201ENST00000420996 SYTL3Q4VX76 610 aa16.2■□□□□ 0.18
UPF3AP3-201ENST00000420996 AGAP7PQ5VUJ5 663 aa16.2■□□□□ 0.18
UPF3AP3-201ENST00000420996 TTLL10Q6ZVT0 673 aa16.2■□□□□ 0.18
UPF3AP3-201ENST00000420996 MCATQ8IVS2 390 aaKnown RBP16.2■□□□□ 0.18
UPF3AP3-201ENST00000420996 DNAJB14Q8TBM8 379 aa16.2■□□□□ 0.18
UPF3AP3-201ENST00000420996 AGAP4Q96P64 663 aa16.2■□□□□ 0.18
UPF3AP3-201ENST00000420996 LRRC40Q9H9A6 602 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms