RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 QSOX1O00391 747 aa9.88□□□□□ -0.83
HDLBP-206ENST00000417540 NKX2-8O15522 239 aa9.88□□□□□ -0.83
HDLBP-206ENST00000417540 RAD51CO43502 376 aa9.88□□□□□ -0.83
HDLBP-206ENST00000417540 USP1O94782 785 aa9.88□□□□□ -0.83
HDLBP-206ENST00000417540 SEC31AO94979 1220 aaKnown RBP9.88□□□□□ -0.83
HDLBP-206ENST00000417540 MAGP20916 626 aa9.88□□□□□ -0.83
HDLBP-206ENST00000417540 GABRB3P28472 473 aa9.88□□□□□ -0.83
HDLBP-206ENST00000417540 PRDX3P30048 256 aaKnown RBP9.88□□□□□ -0.83
HDLBP-206ENST00000417540 CD151P48509 253 aa9.88□□□□□ -0.83
HDLBP-206ENST00000417540 SNRPNP63162 240 aaKnown RBP9.88□□□□□ -0.83
HDLBP-206ENST00000417540 CDK16Q00536 496 aa9.88□□□□□ -0.83
HDLBP-206ENST00000417540 DR1Q01658 176 aa9.88□□□□□ -0.83
HDLBP-206ENST00000417540 LAMB3Q13751 1172 aa9.88□□□□□ -0.83
HDLBP-206ENST00000417540 SLC9A5Q14940 896 aa9.88□□□□□ -0.83
HDLBP-206ENST00000417540 PTCHD3Q3KNS1 767 aa9.88□□□□□ -0.83
HDLBP-206ENST00000417540 TMEM164Q5U3C3 297 aa9.88□□□□□ -0.83
HDLBP-206ENST00000417540 LYPLAL1Q5VWZ2 237 aa9.88□□□□□ -0.83
HDLBP-206ENST00000417540 CPZQ66K79 652 aa9.88□□□□□ -0.83
HDLBP-206ENST00000417540 C4orf22Q6V702 233 aa9.88□□□□□ -0.83
HDLBP-206ENST00000417540 SYT10Q6XYQ8 523 aa9.88□□□□□ -0.83
HDLBP-206ENST00000417540 PPP1R3BQ86XI6 285 aa9.88□□□□□ -0.83
HDLBP-206ENST00000417540 ANKMY2Q8IV38 441 aa9.88□□□□□ -0.83
HDLBP-206ENST00000417540 CPNE9Q8IYJ1 553 aa9.88□□□□□ -0.83
HDLBP-206ENST00000417540 EXD3Q8N9H8 876 aa9.88□□□□□ -0.83
HDLBP-206ENST00000417540 PPFIBP2Q8ND30 876 aa9.88□□□□□ -0.83
HDLBP-206ENST00000417540 CD200R1Q8TD46 325 aa9.88□□□□□ -0.83
HDLBP-206ENST00000417540 SNRNP27Q8WVK2 155 aaKnown RBP9.88□□□□□ -0.83
HDLBP-206ENST00000417540 SKA2Q8WVK7 121 aaPredicted RBP9.88□□□□□ -0.83
HDLBP-206ENST00000417540 SLC39A7Q92504 469 aa9.88□□□□□ -0.83
HDLBP-206ENST00000417540 UBXN4Q92575 508 aa9.88□□□□□ -0.83
HDLBP-206ENST00000417540 CD180Q99467 661 aa9.88□□□□□ -0.83
HDLBP-206ENST00000417540 CARD6Q9BX69 1037 aa9.88□□□□□ -0.83
HDLBP-206ENST00000417540 SLC12A9Q9BXP2 914 aa9.88□□□□□ -0.83
HDLBP-206ENST00000417540 DPH5Q9H2P9 285 aa9.88□□□□□ -0.83
HDLBP-206ENST00000417540 TFB2MQ9H5Q4 396 aaKnown RBP9.88□□□□□ -0.83
HDLBP-206ENST00000417540 FGF21Q9NSA1 209 aa9.88□□□□□ -0.83
HDLBP-206ENST00000417540 IKZF3Q9UKT9 509 aa9.88□□□□□ -0.83
HDLBP-206ENST00000417540 RARRES3Q9UL19 164 aa9.88□□□□□ -0.83
HDLBP-206ENST00000417540 HEBP2Q9Y5Z4 205 aa9.88□□□□□ -0.83
HDLBP-206ENST00000417540 SAR1BQ9Y6B6 198 aa9.88□□□□□ -0.83
HDLBP-206ENST00000417540 ZNF462Q96JM2 2506 aa9.88□□□□□ -0.83
HDLBP-206ENST00000417540 COL12A1Q99715 3063 aa9.87□□□□□ -0.83
HDLBP-206ENST00000417540 MED13Q9UHV7 2174 aa9.87□□□□□ -0.83
HDLBP-206ENST00000417540 A0A0J9YY10 115 aa9.87□□□□□ -0.83
HDLBP-206ENST00000417540 A0A1W2PPV9 198 aa9.87□□□□□ -0.83
HDLBP-206ENST00000417540 PIPSLA2A3N6 862 aa9.87□□□□□ -0.83
HDLBP-206ENST00000417540 CTAGE9A4FU28 777 aa9.87□□□□□ -0.83
HDLBP-206ENST00000417540 KLHL33A6NCF5 533 aa9.87□□□□□ -0.83
HDLBP-206ENST00000417540 H3BMH7 237 aa9.87□□□□□ -0.83
HDLBP-206ENST00000417540 ERVH48-1M5A8F1 160 aa9.87□□□□□ -0.83
HDLBP-206ENST00000417540 TOX3O15405 576 aaPredicted RBP9.87□□□□□ -0.83
HDLBP-206ENST00000417540 SCRG1O75711 98 aa9.87□□□□□ -0.83
HDLBP-206ENST00000417540 MED26O95402 600 aa9.87□□□□□ -0.83
HDLBP-206ENST00000417540 C1orf105O95561 183 aa9.87□□□□□ -0.83
HDLBP-206ENST00000417540 ZBTB11O95625 1053 aaPredicted RBP9.87□□□□□ -0.83
HDLBP-206ENST00000417540 S1PR4O95977 384 aa9.87□□□□□ -0.83
HDLBP-206ENST00000417540 MLNP12872 115 aa9.87□□□□□ -0.83
HDLBP-206ENST00000417540 PGAM1P18669 254 aa9.87□□□□□ -0.83
HDLBP-206ENST00000417540 NR1D1P20393 614 aa9.87□□□□□ -0.83
HDLBP-206ENST00000417540 ITGAXP20702 1163 aa9.87□□□□□ -0.83
HDLBP-206ENST00000417540 MCM3P25205 808 aa9.87□□□□□ -0.83
HDLBP-206ENST00000417540 SHMT2P34897 504 aa9.87□□□□□ -0.83
HDLBP-206ENST00000417540 DLSTP36957 453 aa9.87□□□□□ -0.83
HDLBP-206ENST00000417540 ELK3P41970 407 aa9.87□□□□□ -0.83
HDLBP-206ENST00000417540 CLCN7P51798 805 aa9.87□□□□□ -0.83
HDLBP-206ENST00000417540 CHAF1BQ13112 559 aa9.87□□□□□ -0.83
HDLBP-206ENST00000417540 PRKAA1Q13131 559 aa9.87□□□□□ -0.83
HDLBP-206ENST00000417540 ZNF460Q14592 562 aa9.87□□□□□ -0.83
HDLBP-206ENST00000417540 TMED2Q15363 201 aa9.87□□□□□ -0.83
HDLBP-206ENST00000417540 TBR1Q16650 682 aa9.87□□□□□ -0.83
HDLBP-206ENST00000417540 LONRF1Q17RB8 773 aa9.87□□□□□ -0.83
HDLBP-206ENST00000417540 TAF1BQ53T94 588 aaPredicted RBP9.87□□□□□ -0.83
HDLBP-206ENST00000417540 HSP90AA5PQ58FG0 334 aa9.87□□□□□ -0.83
HDLBP-206ENST00000417540 MRNIPQ6NTE8 343 aa9.87□□□□□ -0.83
HDLBP-206ENST00000417540 HIBCHQ6NVY1 386 aaPredicted RBP9.87□□□□□ -0.83
HDLBP-206ENST00000417540 NEPROQ6NW34 567 aa9.87□□□□□ -0.83
HDLBP-206ENST00000417540 ARMC6Q6NXE6 501 aa9.87□□□□□ -0.83
HDLBP-206ENST00000417540 C16orf46Q6P387 395 aa9.87□□□□□ -0.83
HDLBP-206ENST00000417540 TMEM126BQ8IUX1 230 aa9.87□□□□□ -0.83
HDLBP-206ENST00000417540 TBC1D21Q8IYX1 336 aa9.87□□□□□ -0.83
HDLBP-206ENST00000417540 ZBTB2Q8N680 514 aa9.87□□□□□ -0.83
HDLBP-206ENST00000417540 METTL27Q8N6F8 245 aaPredicted RBP9.87□□□□□ -0.83
HDLBP-206ENST00000417540 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.87□□□□□ -0.83
HDLBP-206ENST00000417540 UBE2Q2Q8WVN8 375 aa9.87□□□□□ -0.83
HDLBP-206ENST00000417540 C16orf45Q96MC5 204 aaPredicted RBP9.87□□□□□ -0.83
HDLBP-206ENST00000417540 TEFMQ96QE5 360 aaKnown RBP9.87□□□□□ -0.83
HDLBP-206ENST00000417540 GPR21Q99679 349 aa9.87□□□□□ -0.83
HDLBP-206ENST00000417540 GPN2Q9H9Y4 310 aaPredicted RBP9.87□□□□□ -0.83
HDLBP-206ENST00000417540 SLC6A20Q9NP91 592 aa9.87□□□□□ -0.83
HDLBP-206ENST00000417540 ANAPC5Q9UJX4 755 aa9.87□□□□□ -0.83
HDLBP-206ENST00000417540 SH2B3Q9UQQ2 575 aa9.87□□□□□ -0.83
HDLBP-206ENST00000417540 SNX24Q9Y343 169 aa9.87□□□□□ -0.83
HDLBP-206ENST00000417540 PCDHB11Q9Y5F2 797 aa9.87□□□□□ -0.83
HDLBP-206ENST00000417540 PSAT1Q9Y617 370 aa9.87□□□□□ -0.83
HDLBP-206ENST00000417540 COLEC10Q9Y6Z7 277 aa9.87□□□□□ -0.83
HDLBP-206ENST00000417540 NBPF19A0A087WUL8 3843 aa9.86□□□□□ -0.83
HDLBP-206ENST00000417540 EIF4E1BA6NMX2 242 aaKnown RBP9.86□□□□□ -0.83
HDLBP-206ENST00000417540 C2orf74A8MZ97 194 aa9.86□□□□□ -0.83
HDLBP-206ENST00000417540 ISM1B1AKI9 464 aa9.86□□□□□ -0.83
HDLBP-206ENST00000417540 MASP2O00187 686 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms