RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 GALNT13Q8IUC8 556 aa13.18□□□□□ -0.3
RAPGEF1-204ENST00000414781 ANKMY2Q8IV38 441 aa13.18□□□□□ -0.3
RAPGEF1-204ENST00000414781 NANOS1Q8WY41 292 aaKnown RBP13.18□□□□□ -0.3
RAPGEF1-204ENST00000414781 RUFY1Q96T51 708 aa13.18□□□□□ -0.3
RAPGEF1-204ENST00000414781 CCDC77Q9BR77 488 aa13.18□□□□□ -0.3
RAPGEF1-204ENST00000414781 UCK1Q9HA47 277 aa13.18□□□□□ -0.3
RAPGEF1-204ENST00000414781 CHRAC1Q9NRG0 131 aa13.18□□□□□ -0.3
RAPGEF1-204ENST00000414781 B4GALT6Q9UBX8 382 aa13.18□□□□□ -0.3
RAPGEF1-204ENST00000414781 CHMP2BQ9UQN3 213 aa13.18□□□□□ -0.3
RAPGEF1-204ENST00000414781 FAM169AQ9Y6X4 670 aa13.18□□□□□ -0.3
RAPGEF1-204ENST00000414781 KIR2DS5A0A0G2JLQ3 304 aa13.17□□□□□ -0.3
RAPGEF1-204ENST00000414781 A0A0G2JNG1 304 aa13.17□□□□□ -0.3
RAPGEF1-204ENST00000414781 OR5K4A6NMS3 321 aa13.17□□□□□ -0.3
RAPGEF1-204ENST00000414781 KIR2DS3K7RE56 304 aa13.17□□□□□ -0.3
RAPGEF1-204ENST00000414781 LDB2O43679 373 aa13.17□□□□□ -0.3
RAPGEF1-204ENST00000414781 IPO13O94829 963 aaKnown RBP13.17□□□□□ -0.3
RAPGEF1-204ENST00000414781 HTR1EP28566 365 aa13.17□□□□□ -0.3
RAPGEF1-204ENST00000414781 GLRBP48167 497 aa13.17□□□□□ -0.3
RAPGEF1-204ENST00000414781 SEPHS1P49903 392 aa13.17□□□□□ -0.3
RAPGEF1-204ENST00000414781 KIR2DS5Q14953 304 aa13.17□□□□□ -0.3
RAPGEF1-204ENST00000414781 KYNUQ16719 465 aa13.17□□□□□ -0.3
RAPGEF1-204ENST00000414781 ANKRD20A4Q4UJ75 823 aa13.17□□□□□ -0.3
RAPGEF1-204ENST00000414781 PYCR3Q53H96 274 aa13.17□□□□□ -0.3
RAPGEF1-204ENST00000414781 HP1BP3Q5SSJ5 553 aaPredicted RBP13.17□□□□□ -0.3
RAPGEF1-204ENST00000414781 TSTD2Q5T7W7 516 aa13.17□□□□□ -0.3
RAPGEF1-204ENST00000414781 ZNF449Q6P9G9 518 aa13.17□□□□□ -0.3
RAPGEF1-204ENST00000414781 IYDQ6PHW0 289 aa13.17□□□□□ -0.3
RAPGEF1-204ENST00000414781 DOK6Q6PKX4 331 aa13.17□□□□□ -0.3
RAPGEF1-204ENST00000414781 FJX1Q86VR8 437 aa13.17□□□□□ -0.3
RAPGEF1-204ENST00000414781 KCNMB4Q86W47 210 aa13.17□□□□□ -0.3
RAPGEF1-204ENST00000414781 GSPT2Q8IYD1 628 aaKnown RBP13.17□□□□□ -0.3
RAPGEF1-204ENST00000414781 CNPY4Q8N129 248 aa13.17□□□□□ -0.3
RAPGEF1-204ENST00000414781 MREGQ8N565 214 aa13.17□□□□□ -0.3
RAPGEF1-204ENST00000414781 SGSM3Q96HU1 749 aa13.17□□□□□ -0.3
RAPGEF1-204ENST00000414781 PKD2L2Q9NZM6 624 aa13.17□□□□□ -0.3
RAPGEF1-204ENST00000414781 RARRES3Q9UL19 164 aa13.17□□□□□ -0.3
RAPGEF1-204ENST00000414781 SNX7Q9UNH6 387 aa13.17□□□□□ -0.3
RAPGEF1-204ENST00000414781 NTNG1Q9Y2I2 539 aa13.17□□□□□ -0.3
RAPGEF1-204ENST00000414781 SPO11Q9Y5K1 396 aa13.17□□□□□ -0.3
RAPGEF1-204ENST00000414781 NPIPB15A6NHN6 443 aaPredicted RBP13.16□□□□□ -0.3
RAPGEF1-204ENST00000414781 E2F3O00716 465 aa13.16□□□□□ -0.3
RAPGEF1-204ENST00000414781 PRICKLE3O43900 615 aaPredicted RBP13.16□□□□□ -0.3
RAPGEF1-204ENST00000414781 RASSF9O75901 435 aa13.16□□□□□ -0.3
RAPGEF1-204ENST00000414781 CLDN7O95471 211 aa13.16□□□□□ -0.3
RAPGEF1-204ENST00000414781 SNRPB2P08579 225 aaKnown RBP13.16□□□□□ -0.3
RAPGEF1-204ENST00000414781 PIRTP0C851 137 aa13.16□□□□□ -0.3
RAPGEF1-204ENST00000414781 H2AFXP16104 143 aaPredicted RBP13.16□□□□□ -0.3
RAPGEF1-204ENST00000414781 PSMA3P25788 255 aa13.16□□□□□ -0.3
RAPGEF1-204ENST00000414781 STX2P32856 288 aa13.16□□□□□ -0.3
RAPGEF1-204ENST00000414781 CRADDP78560 199 aa13.16□□□□□ -0.3
RAPGEF1-204ENST00000414781 ILF2Q12905 390 aaKnown RBP13.16□□□□□ -0.3
RAPGEF1-204ENST00000414781 LRRC66Q68CR7 880 aa13.16□□□□□ -0.3
RAPGEF1-204ENST00000414781 RAET1GQ6H3X3 334 aa13.16□□□□□ -0.3
RAPGEF1-204ENST00000414781 FAM199XQ6PEV8 388 aaPredicted RBP13.16□□□□□ -0.3
RAPGEF1-204ENST00000414781 Q6ZS92 163 aa13.16□□□□□ -0.3
RAPGEF1-204ENST00000414781 LMNTD2Q8IXW0 634 aa13.16□□□□□ -0.3
RAPGEF1-204ENST00000414781 MPP5Q8N3R9 675 aa13.16□□□□□ -0.3
RAPGEF1-204ENST00000414781 TTC30BQ8N4P2 665 aa13.16□□□□□ -0.3
RAPGEF1-204ENST00000414781 ZADH2Q8N4Q0 377 aa13.16□□□□□ -0.3
RAPGEF1-204ENST00000414781 GSDMBQ8TAX9 411 aa13.16□□□□□ -0.3
RAPGEF1-204ENST00000414781 UBLCP1Q8WVY7 318 aaPredicted RBP13.16□□□□□ -0.3
RAPGEF1-204ENST00000414781 KLHL6Q8WZ60 621 aa13.16□□□□□ -0.3
RAPGEF1-204ENST00000414781 CDKL2Q92772 493 aa13.16□□□□□ -0.3
RAPGEF1-204ENST00000414781 RELTQ969Z4 430 aa13.16□□□□□ -0.3
RAPGEF1-204ENST00000414781 ZNF669Q96BR6 464 aaPredicted RBP13.16□□□□□ -0.3
RAPGEF1-204ENST00000414781 DTD2Q96FN9 168 aa13.16□□□□□ -0.3
RAPGEF1-204ENST00000414781 CFAP36Q96G28 342 aa13.16□□□□□ -0.3
RAPGEF1-204ENST00000414781 TGM7Q96PF1 710 aa13.16□□□□□ -0.3
RAPGEF1-204ENST00000414781 TBC1D10AQ9BXI6 508 aa13.16□□□□□ -0.3
RAPGEF1-204ENST00000414781 TXLNGYQ9BZA5 131 aa13.16□□□□□ -0.3
RAPGEF1-204ENST00000414781 CDC42EP4Q9H3Q1 356 aaKnown RBP13.16□□□□□ -0.3
RAPGEF1-204ENST00000414781 VPS37BQ9H9H4 285 aa13.16□□□□□ -0.3
RAPGEF1-204ENST00000414781 NLE1Q9NVX2 485 aaPredicted RBP13.16□□□□□ -0.3
RAPGEF1-204ENST00000414781 IL17CQ9P0M4 197 aa13.16□□□□□ -0.3
RAPGEF1-204ENST00000414781 SUCOQ9UBS9 1254 aaKnown RBP13.16□□□□□ -0.3
RAPGEF1-204ENST00000414781 ARL5AQ9Y689 179 aa13.16□□□□□ -0.3
RAPGEF1-204ENST00000414781 A0A087WUV0 522 aaPredicted RBP13.15□□□□□ -0.3
RAPGEF1-204ENST00000414781 DYNC1I1O14576 645 aa13.15□□□□□ -0.3
RAPGEF1-204ENST00000414781 PFDN6O15212 129 aa13.15□□□□□ -0.3
RAPGEF1-204ENST00000414781 CPNE3O75131 537 aaKnown RBP13.15□□□□□ -0.3
RAPGEF1-204ENST00000414781 EML2O95834 649 aa13.15□□□□□ -0.3
RAPGEF1-204ENST00000414781 ABHD2P08910 425 aa13.15□□□□□ -0.3
RAPGEF1-204ENST00000414781 RAB40ALP0C0E4 278 aa13.15□□□□□ -0.3
RAPGEF1-204ENST00000414781 PPARGP37231 505 aaPredicted RBP13.15□□□□□ -0.3
RAPGEF1-204ENST00000414781 STC1P52823 247 aa13.15□□□□□ -0.3
RAPGEF1-204ENST00000414781 PRAMEP78395 509 aa13.15□□□□□ -0.3
RAPGEF1-204ENST00000414781 PTSQ03393 145 aa13.15□□□□□ -0.3
RAPGEF1-204ENST00000414781 ACVR1Q04771 509 aa13.15□□□□□ -0.3
RAPGEF1-204ENST00000414781 TUBB3Q13509 450 aa13.15□□□□□ -0.3
RAPGEF1-204ENST00000414781 THOC5Q13769 683 aaKnown RBP13.15□□□□□ -0.3
RAPGEF1-204ENST00000414781 CRYMQ14894 314 aa13.15□□□□□ -0.3
RAPGEF1-204ENST00000414781 FASTKD3Q14CZ7 662 aaKnown RBP13.15□□□□□ -0.3
RAPGEF1-204ENST00000414781 CNGA3Q16281 694 aa13.15□□□□□ -0.3
RAPGEF1-204ENST00000414781 LONRF1Q17RB8 773 aa13.15□□□□□ -0.3
RAPGEF1-204ENST00000414781 BEND6Q5SZJ8 279 aaPredicted RBP13.15□□□□□ -0.3
RAPGEF1-204ENST00000414781 STEAP4Q687X5 459 aa13.15□□□□□ -0.3
RAPGEF1-204ENST00000414781 PDPK2PQ6A1A2 396 aa13.15□□□□□ -0.3
RAPGEF1-204ENST00000414781 KIAA0930Q6ICG6 404 aaPredicted RBP13.15□□□□□ -0.3
RAPGEF1-204ENST00000414781 PWWP2BQ6NUJ5 590 aa13.15□□□□□ -0.3
RAPGEF1-204ENST00000414781 MTFR2Q6P444 385 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms