RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 KRT12Q99456 494 aa14.33□□□□□ -0.12
LIMS4-201ENST00000413601 EBNA1BP2Q99848 306 aaKnown RBP14.33□□□□□ -0.12
LIMS4-201ENST00000413601 TRIM31Q9BZY9 425 aa14.33□□□□□ -0.12
LIMS4-201ENST00000413601 IL17BQ9UHF5 180 aa14.33□□□□□ -0.12
LIMS4-201ENST00000413601 CACNA1GO43497 2377 aa14.33□□□□□ -0.12
LIMS4-201ENST00000413601 CCDC88CQ9P219 2028 aa14.32□□□□□ -0.12
LIMS4-201ENST00000413601 EIF4E1BA6NMX2 242 aaKnown RBP14.32□□□□□ -0.12
LIMS4-201ENST00000413601 ISM1B1AKI9 464 aa14.32□□□□□ -0.12
LIMS4-201ENST00000413601 E5RI56 91 aa14.32□□□□□ -0.12
LIMS4-201ENST00000413601 MAP3K7O43318 606 aa14.32□□□□□ -0.12
LIMS4-201ENST00000413601 PRB1P04280 392 aa14.32□□□□□ -0.12
LIMS4-201ENST00000413601 PEBP1P30086 187 aaKnown RBP14.32□□□□□ -0.12
LIMS4-201ENST00000413601 CASQ1P31415 396 aa14.32□□□□□ -0.12
LIMS4-201ENST00000413601 BDKRB1P46663 353 aa14.32□□□□□ -0.12
LIMS4-201ENST00000413601 RAB28P51157 221 aa14.32□□□□□ -0.12
LIMS4-201ENST00000413601 ITGA8P53708 1063 aa14.32□□□□□ -0.12
LIMS4-201ENST00000413601 MPP1Q00013 466 aa14.32□□□□□ -0.12
LIMS4-201ENST00000413601 GBX1Q14549 363 aa14.32□□□□□ -0.12
LIMS4-201ENST00000413601 CRYMQ14894 314 aa14.32□□□□□ -0.12
LIMS4-201ENST00000413601 MORF4L2Q15014 288 aa14.32□□□□□ -0.12
LIMS4-201ENST00000413601 HIBCHQ6NVY1 386 aaPredicted RBP14.32□□□□□ -0.12
LIMS4-201ENST00000413601 ZNF549Q6P9A3 640 aa14.32□□□□□ -0.12
LIMS4-201ENST00000413601 KCNMB4Q86W47 210 aa14.32□□□□□ -0.12
LIMS4-201ENST00000413601 TMEM126BQ8IUX1 230 aa14.32□□□□□ -0.12
LIMS4-201ENST00000413601 ZBTB2Q8N680 514 aa14.32□□□□□ -0.12
LIMS4-201ENST00000413601 LINC01555Q8NAE3 123 aa14.32□□□□□ -0.12
LIMS4-201ENST00000413601 OR8K5Q8NH50 307 aa14.32□□□□□ -0.12
LIMS4-201ENST00000413601 CALML6Q8TD86 181 aa14.32□□□□□ -0.12
LIMS4-201ENST00000413601 SLC45A3Q96JT2 553 aa14.32□□□□□ -0.12
LIMS4-201ENST00000413601 IL17FQ96PD4 163 aa14.32□□□□□ -0.12
LIMS4-201ENST00000413601 MENTQ9BUN1 341 aa14.32□□□□□ -0.12
LIMS4-201ENST00000413601 TWSG1Q9GZX9 223 aa14.32□□□□□ -0.12
LIMS4-201ENST00000413601 LATS2Q9NRM7 1088 aa14.32□□□□□ -0.12
LIMS4-201ENST00000413601 IARS2Q9NSE4 1012 aaKnown RBP14.32□□□□□ -0.12
LIMS4-201ENST00000413601 FBXO5Q9UKT4 447 aa14.32□□□□□ -0.12
LIMS4-201ENST00000413601 ANKRD12Q6UB98 2062 aa14.32□□□□□ -0.12
LIMS4-201ENST00000413601 KRT87PA6NCN2 255 aa14.31□□□□□ -0.12
LIMS4-201ENST00000413601 TMEM150CB9EJG8 249 aa14.31□□□□□ -0.12
LIMS4-201ENST00000413601 SCRG1O75711 98 aa14.31□□□□□ -0.12
LIMS4-201ENST00000413601 HAUS5O94927 633 aa14.31□□□□□ -0.12
LIMS4-201ENST00000413601 C1orf105O95561 183 aa14.31□□□□□ -0.12
LIMS4-201ENST00000413601 MT-ND3P03897 115 aa14.31□□□□□ -0.12
LIMS4-201ENST00000413601 CCNYL3P0C7X3 344 aa14.31□□□□□ -0.12
LIMS4-201ENST00000413601 ERVK-10P10266 1014 aa14.31□□□□□ -0.12
LIMS4-201ENST00000413601 CD9P21926 228 aa14.31□□□□□ -0.12
LIMS4-201ENST00000413601 F8A1P23610 371 aa14.31□□□□□ -0.12
LIMS4-201ENST00000413601 DLSTP36957 453 aa14.31□□□□□ -0.12
LIMS4-201ENST00000413601 CLCN7P51798 805 aa14.31□□□□□ -0.12
LIMS4-201ENST00000413601 ETF1P62495 437 aaKnown RBP14.31□□□□□ -0.12
LIMS4-201ENST00000413601 MRPS25P82663 173 aaKnown RBP14.31□□□□□ -0.12
LIMS4-201ENST00000413601 LY6DQ14210 128 aa14.31□□□□□ -0.12
LIMS4-201ENST00000413601 KIR2DS3Q14952 304 aa14.31□□□□□ -0.12
LIMS4-201ENST00000413601 ZIC1Q15915 447 aa14.31□□□□□ -0.12
LIMS4-201ENST00000413601 CCSMST1Q4G0I0 132 aa14.31□□□□□ -0.12
LIMS4-201ENST00000413601 ACSBG2Q5FVE4 666 aa14.31□□□□□ -0.12
LIMS4-201ENST00000413601 PRAMEF17Q5VTA0 474 aa14.31□□□□□ -0.12
LIMS4-201ENST00000413601 TTC23LQ6PF05 361 aa14.31□□□□□ -0.12
LIMS4-201ENST00000413601 SYT10Q6XYQ8 523 aa14.31□□□□□ -0.12
LIMS4-201ENST00000413601 CDHR3Q6ZTQ4 885 aa14.31□□□□□ -0.12
LIMS4-201ENST00000413601 TAX1BP1Q86VP1 789 aa14.31□□□□□ -0.12
LIMS4-201ENST00000413601 SPNS2Q8IVW8 549 aa14.31□□□□□ -0.12
LIMS4-201ENST00000413601 FAM20CQ8IXL6 584 aa14.31□□□□□ -0.12
LIMS4-201ENST00000413601 LMNTD2Q8IXW0 634 aa14.31□□□□□ -0.12
LIMS4-201ENST00000413601 PDIK1LQ8N165 341 aa14.31□□□□□ -0.12
LIMS4-201ENST00000413601 C19orf47Q8N9M1 422 aaKnown RBP14.31□□□□□ -0.12
LIMS4-201ENST00000413601 LSM14AQ8ND56 463 aaKnown RBP14.31□□□□□ -0.12
LIMS4-201ENST00000413601 OR1L3Q8NH93 324 aa14.31□□□□□ -0.12
LIMS4-201ENST00000413601 EXTL1Q92935 676 aa14.31□□□□□ -0.12
LIMS4-201ENST00000413601 SNF8Q96H20 258 aa14.31□□□□□ -0.12
LIMS4-201ENST00000413601 FOPNLQ96NB1 174 aa14.31□□□□□ -0.12
LIMS4-201ENST00000413601 SLC30A3Q99726 388 aa14.31□□□□□ -0.12
LIMS4-201ENST00000413601 FAM167BQ9BTA0 163 aa14.31□□□□□ -0.12
LIMS4-201ENST00000413601 EFHD1Q9BUP0 239 aa14.31□□□□□ -0.12
LIMS4-201ENST00000413601 CCDC68Q9H2F9 335 aa14.31□□□□□ -0.12
LIMS4-201ENST00000413601 AKIRIN1Q9H9L7 192 aaPredicted RBP14.31□□□□□ -0.12
LIMS4-201ENST00000413601 FANCEQ9HB96 536 aa14.31□□□□□ -0.12
LIMS4-201ENST00000413601 FAM60AQ9NP50 221 aa14.31□□□□□ -0.12
LIMS4-201ENST00000413601 CROTQ9UKG9 612 aa14.31□□□□□ -0.12
LIMS4-201ENST00000413601 PADI1Q9ULC6 663 aa14.31□□□□□ -0.12
LIMS4-201ENST00000413601 SLC39A10Q9ULF5 831 aa14.31□□□□□ -0.12
LIMS4-201ENST00000413601 MRPS18BQ9Y676 258 aaKnown RBP14.31□□□□□ -0.12
LIMS4-201ENST00000413601 FER1L5A0AVI2 2057 aa14.3□□□□□ -0.12
LIMS4-201ENST00000413601 A0A0J9YY10 115 aa14.3□□□□□ -0.12
LIMS4-201ENST00000413601 ZNF891A8MT65 544 aaPredicted RBP14.3□□□□□ -0.12
LIMS4-201ENST00000413601 EFCAB8A8MWE9 144 aa14.3□□□□□ -0.12
LIMS4-201ENST00000413601 TK2O00142 265 aa14.3□□□□□ -0.12
LIMS4-201ENST00000413601 RASGRF2O14827 1237 aa14.3□□□□□ -0.12
LIMS4-201ENST00000413601 NKX2-8O15522 239 aa14.3□□□□□ -0.12
LIMS4-201ENST00000413601 SEC31AO94979 1220 aaKnown RBP14.3□□□□□ -0.12
LIMS4-201ENST00000413601 MATN4O95460 622 aa14.3□□□□□ -0.12
LIMS4-201ENST00000413601 TTC4O95801 387 aa14.3□□□□□ -0.12
LIMS4-201ENST00000413601 ATP5DP30049 168 aa14.3□□□□□ -0.12
LIMS4-201ENST00000413601 ELK3P41970 407 aa14.3□□□□□ -0.12
LIMS4-201ENST00000413601 SLC5A12Q1EHB4 618 aa14.3□□□□□ -0.12
LIMS4-201ENST00000413601 KLHL38Q2WGJ6 581 aa14.3□□□□□ -0.12
LIMS4-201ENST00000413601 LINC00303Q3SY05 128 aa14.3□□□□□ -0.12
LIMS4-201ENST00000413601 SPANXN3Q5MJ09 141 aa14.3□□□□□ -0.12
LIMS4-201ENST00000413601 FAM199XQ6PEV8 388 aaPredicted RBP14.3□□□□□ -0.12
LIMS4-201ENST00000413601 SLC38A9Q8NBW4 561 aa14.3□□□□□ -0.12
LIMS4-201ENST00000413601 OR2L8Q8NGY9 312 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms