RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 IFNEQ86WN2 208 aa19.62■□□□□ 0.73
USP39-204ENST00000409766 LIX1Q8N485 282 aa19.62■□□□□ 0.73
USP39-204ENST00000409766 FAM110BQ8TC76 370 aa19.62■□□□□ 0.73
USP39-204ENST00000409766 FBXL8Q96CD0 374 aa19.62■□□□□ 0.73
USP39-204ENST00000409766 DEC1Q9P2X7 70 aa19.62■□□□□ 0.73
USP39-204ENST00000409766 SNX6Q9UNH7 406 aa19.62■□□□□ 0.73
USP39-204ENST00000409766 DHRS12A0PJE2 317 aa19.61■□□□□ 0.73
USP39-204ENST00000409766 PRAMEF4O60810 478 aa19.61■□□□□ 0.73
USP39-204ENST00000409766 ATG13O75143 517 aa19.61■□□□□ 0.73
USP39-204ENST00000409766 PSIP1O75475 530 aaKnown RBP19.61■□□□□ 0.73
USP39-204ENST00000409766 TIPRLO75663 272 aa19.61■□□□□ 0.73
USP39-204ENST00000409766 LINGO3P0C6S8 592 aa19.61■□□□□ 0.73
USP39-204ENST00000409766 HLA-EP13747 358 aa19.61■□□□□ 0.73
USP39-204ENST00000409766 ITGB7P26010 798 aa19.61■□□□□ 0.73
USP39-204ENST00000409766 PFN3P60673 137 aa19.61■□□□□ 0.73
USP39-204ENST00000409766 ERVK-21P61565 698 aa19.61■□□□□ 0.73
USP39-204ENST00000409766 INPP5AQ14642 412 aa19.61■□□□□ 0.73
USP39-204ENST00000409766 FNDC3BQ53EP0 1204 aaKnown RBP19.61■□□□□ 0.73
USP39-204ENST00000409766 SLC44A4Q53GD3 710 aa19.61■□□□□ 0.73
USP39-204ENST00000409766 PRAMEF9Q5VWM5 478 aa19.61■□□□□ 0.73
USP39-204ENST00000409766 SUSD1Q6UWL2 747 aa19.61■□□□□ 0.73
USP39-204ENST00000409766 GALNT4Q8N4A0 578 aa19.61■□□□□ 0.73
USP39-204ENST00000409766 MARVELD2Q8N4S9 558 aa19.61■□□□□ 0.73
USP39-204ENST00000409766 GLB1L3Q8NCI6 653 aaPredicted RBP19.61■□□□□ 0.73
USP39-204ENST00000409766 TMIEQ8NEW7 156 aa19.61■□□□□ 0.73
USP39-204ENST00000409766 SELENOMQ8WWX9 145 aa19.61■□□□□ 0.73
USP39-204ENST00000409766 FGF13Q92913 245 aa19.61■□□□□ 0.73
USP39-204ENST00000409766 DTD2Q96FN9 168 aa19.61■□□□□ 0.73
USP39-204ENST00000409766 SAMD11Q96NU1 681 aa19.61■□□□□ 0.73
USP39-204ENST00000409766 ZBTB18Q99592 522 aa19.61■□□□□ 0.73
USP39-204ENST00000409766 DNAJC11Q9NVH1 559 aa19.61■□□□□ 0.73
USP39-204ENST00000409766 FAM8A1Q9UBU6 413 aa19.61■□□□□ 0.73
USP39-204ENST00000409766 HTR1EP28566 365 aa19.61■□□□□ 0.73
USP39-204ENST00000409766 NRIP1P48552 1158 aa19.61■□□□□ 0.73
USP39-204ENST00000409766 HSPA13P48723 471 aa19.61■□□□□ 0.73
USP39-204ENST00000409766 PWP1Q13610 501 aa19.61■□□□□ 0.73
USP39-204ENST00000409766 USP39Q53GS9 565 aaKnown RBP19.61■□□□□ 0.73
USP39-204ENST00000409766 MTX3Q5HYI7 312 aa19.61■□□□□ 0.73
USP39-204ENST00000409766 CYP2U1Q7Z449 544 aa19.61■□□□□ 0.73
USP39-204ENST00000409766 AMIGO2Q86SJ2 522 aa19.61■□□□□ 0.73
USP39-204ENST00000409766 PPM1MQ96MI6 270 aa19.61■□□□□ 0.73
USP39-204ENST00000409766 CGREF1Q99674 301 aa19.61■□□□□ 0.73
USP39-204ENST00000409766 CCM2Q9BSQ5 444 aa19.61■□□□□ 0.73
USP39-204ENST00000409766 DPY30Q9C005 99 aa19.61■□□□□ 0.73
USP39-204ENST00000409766 ATG10Q9H0Y0 220 aa19.61■□□□□ 0.73
USP39-204ENST00000409766 Q9H521 79 aa19.61■□□□□ 0.73
USP39-204ENST00000409766 ELOVL6Q9H5J4 265 aa19.61■□□□□ 0.73
USP39-204ENST00000409766 NEUROG3Q9Y4Z2 214 aa19.61■□□□□ 0.73
USP39-204ENST00000409766 RANBP2P49792 3224 aaKnown RBP19.61■□□□□ 0.73
USP39-204ENST00000409766 EDDM13A0A1B0GTR0 161 aa19.6■□□□□ 0.73
USP39-204ENST00000409766 SLC5A10A0PJK1 596 aa19.6■□□□□ 0.73
USP39-204ENST00000409766 ARHGEF33A8MVX0 844 aa19.6■□□□□ 0.73
USP39-204ENST00000409766 H0YJX3 145 aa19.6■□□□□ 0.73
USP39-204ENST00000409766 INPP4BO15327 924 aa19.6■□□□□ 0.73
USP39-204ENST00000409766 MTHFD1P11586 935 aaKnown RBP19.6■□□□□ 0.73
USP39-204ENST00000409766 ITPKAP23677 461 aa19.6■□□□□ 0.73
USP39-204ENST00000409766 ABRQ12979 859 aa19.6■□□□□ 0.73
USP39-204ENST00000409766 KCNC3Q14003 757 aa19.6■□□□□ 0.73
USP39-204ENST00000409766 GRM2Q14416 872 aa19.6■□□□□ 0.73
USP39-204ENST00000409766 DUSP6Q16828 381 aa19.6■□□□□ 0.73
USP39-204ENST00000409766 PLA2G4EQ3MJ16 856 aa19.6■□□□□ 0.73
USP39-204ENST00000409766 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.6■□□□□ 0.73
USP39-204ENST00000409766 UGT2A3Q6UWM9 527 aa19.6■□□□□ 0.73
USP39-204ENST00000409766 ERMP1Q7Z2K6 904 aa19.6■□□□□ 0.73
USP39-204ENST00000409766 NLRP8Q86W28 1048 aa19.6■□□□□ 0.73
USP39-204ENST00000409766 ADGRG5Q8IZF4 528 aa19.6■□□□□ 0.73
USP39-204ENST00000409766 ST13P5Q8NFI4 369 aaPredicted RBP19.6■□□□□ 0.73
USP39-204ENST00000409766 VN1R2Q8NFZ6 395 aa19.6■□□□□ 0.73
USP39-204ENST00000409766 PIP4K2CQ8TBX8 421 aa19.6■□□□□ 0.73
USP39-204ENST00000409766 SLC13A3Q8WWT9 602 aa19.6■□□□□ 0.73
USP39-204ENST00000409766 GLMNQ92990 594 aa19.6■□□□□ 0.73
USP39-204ENST00000409766 ARRDC3Q96B67 414 aa19.6■□□□□ 0.73
USP39-204ENST00000409766 TMEM159Q96B96 161 aa19.6■□□□□ 0.73
USP39-204ENST00000409766 PPWD1Q96BP3 646 aaKnown RBP19.6■□□□□ 0.73
USP39-204ENST00000409766 CLMPQ9H6B4 373 aa19.6■□□□□ 0.73
USP39-204ENST00000409766 COQ10BQ9H8M1 238 aa19.6■□□□□ 0.73
USP39-204ENST00000409766 PDP2Q9P2J9 529 aa19.6■□□□□ 0.73
USP39-204ENST00000409766 AP4B1Q9Y6B7 739 aa19.6■□□□□ 0.73
USP39-204ENST00000409766 HEPACAM2A8MVW5 462 aa19.59■□□□□ 0.73
USP39-204ENST00000409766 HNRNPRO43390 633 aaKnown RBP19.59■□□□□ 0.73
USP39-204ENST00000409766 SOD1P00441 154 aa19.59■□□□□ 0.73
USP39-204ENST00000409766 BMP2P12643 396 aa19.59■□□□□ 0.73
USP39-204ENST00000409766 BCKDHAP12694 445 aa19.59■□□□□ 0.73
USP39-204ENST00000409766 PRPH2P23942 346 aa19.59■□□□□ 0.73
USP39-204ENST00000409766 PSMA4P25789 261 aaKnown RBP19.59■□□□□ 0.73
USP39-204ENST00000409766 NEK2P51955 445 aa19.59■□□□□ 0.73
USP39-204ENST00000409766 EIF4HQ15056 248 aaKnown RBP19.59■□□□□ 0.73
USP39-204ENST00000409766 FAM174BQ3ZCQ3 159 aa19.59■□□□□ 0.73
USP39-204ENST00000409766 SYTL3Q4VX76 610 aa19.59■□□□□ 0.73
USP39-204ENST00000409766 TBCELQ5QJ74 424 aa19.59■□□□□ 0.73
USP39-204ENST00000409766 C9orf50Q5SZB4 431 aa19.59■□□□□ 0.73
USP39-204ENST00000409766 APLFQ8IW19 511 aaPredicted RBP19.59■□□□□ 0.73
USP39-204ENST00000409766 SFTPA1Q8IWL2 248 aa19.59■□□□□ 0.73
USP39-204ENST00000409766 LILRA3Q8N6C8 439 aaPredicted RBP19.59■□□□□ 0.73
USP39-204ENST00000409766 OR8D1Q8WZ84 308 aa19.59■□□□□ 0.73
USP39-204ENST00000409766 SFXN1Q9H9B4 322 aa19.59■□□□□ 0.73
USP39-204ENST00000409766 USP22Q9UPT9 525 aa19.59■□□□□ 0.73
USP39-204ENST00000409766 AURKCQ9UQB9 309 aa19.59■□□□□ 0.73
USP39-204ENST00000409766 COQ6Q9Y2Z9 468 aa19.59■□□□□ 0.73
USP39-204ENST00000409766 TCRBV5S2A0A599 114 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms