RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 IL17RCQ8NAC3 791 aa13.73□□□□□ -0.21
LIMS2-206ENST00000409754 PLA2G15Q8NCC3 412 aa13.73□□□□□ -0.21
LIMS2-206ENST00000409754 FBXO15Q8NCQ5 510 aaPredicted RBP13.73□□□□□ -0.21
LIMS2-206ENST00000409754 OR2T11Q8NH01 316 aa13.73□□□□□ -0.21
LIMS2-206ENST00000409754 WDR60Q8WVS4 1066 aa13.73□□□□□ -0.21
LIMS2-206ENST00000409754 ATL1Q8WXF7 558 aa13.73□□□□□ -0.21
LIMS2-206ENST00000409754 MRPL1Q9BYD6 325 aaKnown RBP13.73□□□□□ -0.21
LIMS2-206ENST00000409754 AIG1Q9NVV5 245 aa13.73□□□□□ -0.21
LIMS2-206ENST00000409754 CCDC167Q9P0B6 97 aa13.73□□□□□ -0.21
LIMS2-206ENST00000409754 GULP1Q9UBP9 304 aa13.73□□□□□ -0.21
LIMS2-206ENST00000409754 FAM8A1Q9UBU6 413 aa13.73□□□□□ -0.21
LIMS2-206ENST00000409754 H3BM21 787 aa13.72□□□□□ -0.21
LIMS2-206ENST00000409754 ADAM23O75077 832 aa13.72□□□□□ -0.21
LIMS2-206ENST00000409754 RNASEH2AO75792 299 aaKnown RBP13.72□□□□□ -0.21
LIMS2-206ENST00000409754 CLDN9O95484 217 aa13.72□□□□□ -0.21
LIMS2-206ENST00000409754 EPORP19235 508 aa13.72□□□□□ -0.21
LIMS2-206ENST00000409754 AVPR2P30518 371 aa13.72□□□□□ -0.21
LIMS2-206ENST00000409754 RPS9P46781 194 aaKnown RBP13.72□□□□□ -0.21
LIMS2-206ENST00000409754 MTAPQ13126 283 aa13.72□□□□□ -0.21
LIMS2-206ENST00000409754 PTCHD3Q3KNS1 767 aa13.72□□□□□ -0.21
LIMS2-206ENST00000409754 GGTA1PQ4G0N0 100 aa13.72□□□□□ -0.21
LIMS2-206ENST00000409754 ATP6AP1LQ52LC2 224 aa13.72□□□□□ -0.21
LIMS2-206ENST00000409754 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.72□□□□□ -0.21
LIMS2-206ENST00000409754 SCIMPQ6UWF3 145 aa13.72□□□□□ -0.21
LIMS2-206ENST00000409754 Q6ZSR9 355 aa13.72□□□□□ -0.21
LIMS2-206ENST00000409754 HEATR4Q86WZ0 1026 aa13.72□□□□□ -0.21
LIMS2-206ENST00000409754 FUNDC1Q8IVP5 155 aa13.72□□□□□ -0.21
LIMS2-206ENST00000409754 ZNF547Q8IVP9 402 aa13.72□□□□□ -0.21
LIMS2-206ENST00000409754 KLHDC8AQ8IYD2 350 aa13.72□□□□□ -0.21
LIMS2-206ENST00000409754 OR2L2Q8NH16 312 aa13.72□□□□□ -0.21
LIMS2-206ENST00000409754 HM13Q8TCT9 377 aa13.72□□□□□ -0.21
LIMS2-206ENST00000409754 CCDC138Q96M89 665 aa13.72□□□□□ -0.21
LIMS2-206ENST00000409754 MKRN2Q9H000 416 aaKnown RBP13.72□□□□□ -0.21
LIMS2-206ENST00000409754 RNPEPL1Q9HAU8 725 aa13.72□□□□□ -0.21
LIMS2-206ENST00000409754 CD248Q9HCU0 757 aa13.72□□□□□ -0.21
LIMS2-206ENST00000409754 DNAJC11Q9NVH1 559 aa13.72□□□□□ -0.21
LIMS2-206ENST00000409754 TMEM45AQ9NWC5 275 aa13.72□□□□□ -0.21
LIMS2-206ENST00000409754 GPR45Q9Y5Y3 372 aa13.72□□□□□ -0.21
LIMS2-206ENST00000409754 A0A1W2PQF6 199 aa13.72□□□□□ -0.21
LIMS2-206ENST00000409754 BBIP1A8MTZ0 92 aa13.72□□□□□ -0.21
LIMS2-206ENST00000409754 SLC28A1O00337 649 aa13.72□□□□□ -0.21
LIMS2-206ENST00000409754 CHUKO15111 745 aa13.72□□□□□ -0.21
LIMS2-206ENST00000409754 PLRG1O43660 514 aaKnown RBP13.72□□□□□ -0.21
LIMS2-206ENST00000409754 POP7O75817 140 aaKnown RBP13.72□□□□□ -0.21
LIMS2-206ENST00000409754 KLF8O95600 359 aaPredicted RBP13.72□□□□□ -0.21
LIMS2-206ENST00000409754 DNTTP04053 509 aa13.72□□□□□ -0.21
LIMS2-206ENST00000409754 PCCBP05166 539 aa13.72□□□□□ -0.21
LIMS2-206ENST00000409754 HOXB2P14652 356 aa13.72□□□□□ -0.21
LIMS2-206ENST00000409754 PDHA2P29803 388 aa13.72□□□□□ -0.21
LIMS2-206ENST00000409754 MTTPP55157 894 aa13.72□□□□□ -0.21
LIMS2-206ENST00000409754 ACTR3P61158 418 aa13.72□□□□□ -0.21
LIMS2-206ENST00000409754 RPS21P63220 83 aaKnown RBP13.72□□□□□ -0.21
LIMS2-206ENST00000409754 MRPS21P82921 87 aaKnown RBP13.72□□□□□ -0.21
LIMS2-206ENST00000409754 CDK3Q00526 305 aa13.72□□□□□ -0.21
LIMS2-206ENST00000409754 GRSF1Q12849 480 aaKnown RBP eCLIP13.72□□□□□ -0.21
LIMS2-206ENST00000409754 RPS6KA2Q15349 733 aa13.72□□□□□ -0.21
LIMS2-206ENST00000409754 PDCD4Q53EL6 469 aaKnown RBP13.72□□□□□ -0.21
LIMS2-206ENST00000409754 C6orf136Q5SQH8 315 aa13.72□□□□□ -0.21
LIMS2-206ENST00000409754 KIAA1161Q6NSJ0 714 aa13.72□□□□□ -0.21
LIMS2-206ENST00000409754 CFAP206Q8IYR0 622 aa13.72□□□□□ -0.21
LIMS2-206ENST00000409754 FBXW8Q8N3Y1 598 aa13.72□□□□□ -0.21
LIMS2-206ENST00000409754 SFRP1Q8N474 314 aa13.72□□□□□ -0.21
LIMS2-206ENST00000409754 ENDOVQ8N8Q3 282 aaKnown RBP13.72□□□□□ -0.21
LIMS2-206ENST00000409754 SNX31Q8N9S9 440 aa13.72□□□□□ -0.21
LIMS2-206ENST00000409754 OR9I1Q8NGQ6 314 aa13.72□□□□□ -0.21
LIMS2-206ENST00000409754 CFAP61Q8NHU2 1237 aa13.72□□□□□ -0.21
LIMS2-206ENST00000409754 MAGEB10Q96LZ2 347 aaPredicted RBP13.72□□□□□ -0.21
LIMS2-206ENST00000409754 SERPINI1Q99574 410 aa13.72□□□□□ -0.21
LIMS2-206ENST00000409754 NPAS2Q99743 824 aa13.72□□□□□ -0.21
LIMS2-206ENST00000409754 BRINP2Q9C0B6 783 aa13.72□□□□□ -0.21
LIMS2-206ENST00000409754 DPEP2Q9H4A9 486 aa13.72□□□□□ -0.21
LIMS2-206ENST00000409754 WDR41Q9HAD4 459 aa13.72□□□□□ -0.21
LIMS2-206ENST00000409754 FBXL12Q9NXK8 326 aa13.72□□□□□ -0.21
LIMS2-206ENST00000409754 SCML1Q9UN30 329 aa13.72□□□□□ -0.21
LIMS2-206ENST00000409754 ZFR2Q9UPR6 939 aaKnown RBP13.72□□□□□ -0.21
LIMS2-206ENST00000409754 MRPS17Q9Y2R5 130 aaKnown RBP13.72□□□□□ -0.21
LIMS2-206ENST00000409754 RNF11Q9Y3C5 154 aa13.72□□□□□ -0.21
LIMS2-206ENST00000409754 MGAT4DA6NG13 374 aa13.71□□□□□ -0.22
LIMS2-206ENST00000409754 MANBAO00462 879 aa13.71□□□□□ -0.22
LIMS2-206ENST00000409754 STK25O00506 426 aa13.71□□□□□ -0.22
LIMS2-206ENST00000409754 FBP2O00757 339 aa13.71□□□□□ -0.22
LIMS2-206ENST00000409754 LSM1O15116 133 aaKnown RBP13.71□□□□□ -0.22
LIMS2-206ENST00000409754 RGS14O43566 566 aa13.71□□□□□ -0.22
LIMS2-206ENST00000409754 NRP2O60462 931 aa13.71□□□□□ -0.22
LIMS2-206ENST00000409754 ULK1O75385 1050 aa13.71□□□□□ -0.22
LIMS2-206ENST00000409754 C7P10643 843 aa13.71□□□□□ -0.22
LIMS2-206ENST00000409754 TDGF1P13385 188 aa13.71□□□□□ -0.22
LIMS2-206ENST00000409754 COL9A1P20849 921 aa13.71□□□□□ -0.22
LIMS2-206ENST00000409754 PFN3P60673 137 aa13.71□□□□□ -0.22
LIMS2-206ENST00000409754 EMX2Q04743 252 aa13.71□□□□□ -0.22
LIMS2-206ENST00000409754 LRP8Q14114 963 aa13.71□□□□□ -0.22
LIMS2-206ENST00000409754 ABRAXAS2Q15018 415 aa13.71□□□□□ -0.22
LIMS2-206ENST00000409754 SMU1Q2TAY7 513 aa13.71□□□□□ -0.22
LIMS2-206ENST00000409754 MMEL1Q495T6 779 aa13.71□□□□□ -0.22
LIMS2-206ENST00000409754 C1orf146Q5VVC0 180 aa13.71□□□□□ -0.22
LIMS2-206ENST00000409754 REP15Q6BDI9 236 aa13.71□□□□□ -0.22
LIMS2-206ENST00000409754 NEK5Q6P3R8 708 aa13.71□□□□□ -0.22
LIMS2-206ENST00000409754 XKR5Q6UX68 686 aa13.71□□□□□ -0.22
LIMS2-206ENST00000409754 HACD2Q6Y1H2 254 aa13.71□□□□□ -0.22
LIMS2-206ENST00000409754 BNC2Q6ZN30 1099 aaPredicted RBP13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms