RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 LRRC66Q68CR7 880 aa24.57■■□□□ 1.52
SPIRE1-202ENST00000409402 EFHD2Q96C19 240 aaPredicted RBP24.57■■□□□ 1.52
SPIRE1-202ENST00000409402 CMTM7Q96FZ5 175 aa24.57■■□□□ 1.52
SPIRE1-202ENST00000409402 PLGRKTQ9HBL7 147 aa24.57■■□□□ 1.52
SPIRE1-202ENST00000409402 THUMPD1Q9NXG2 353 aaKnown RBP24.57■■□□□ 1.52
SPIRE1-202ENST00000409402 GSC2O15499 205 aa24.56■■□□□ 1.52
SPIRE1-202ENST00000409402 MPZL2O60487 215 aa24.56■■□□□ 1.52
SPIRE1-202ENST00000409402 EFNA1P20827 205 aaPredicted RBP24.56■■□□□ 1.52
SPIRE1-202ENST00000409402 CDH12P55289 794 aa24.56■■□□□ 1.52
SPIRE1-202ENST00000409402 PITRM1Q5JRX3 1037 aa24.56■■□□□ 1.52
SPIRE1-202ENST00000409402 LCN1P1Q5VSP4 162 aa24.56■■□□□ 1.52
SPIRE1-202ENST00000409402 NATD1Q8N6N6 113 aa24.56■■□□□ 1.52
SPIRE1-202ENST00000409402 SLC35B2Q8TB61 432 aa24.56■■□□□ 1.52
SPIRE1-202ENST00000409402 DENND1AQ8TEH3 1009 aa24.56■■□□□ 1.52
SPIRE1-202ENST00000409402 WDR60Q8WVS4 1066 aa24.56■■□□□ 1.52
SPIRE1-202ENST00000409402 KXD1Q9BQD3 176 aa24.56■■□□□ 1.52
SPIRE1-202ENST00000409402 IQCJ-SCHIP1C9J366 451 aaPredicted RBP24.56■■□□□ 1.52
SPIRE1-202ENST00000409402 CSF2RAP15509 400 aa24.56■■□□□ 1.52
SPIRE1-202ENST00000409402 RIPK1Q13546 671 aa24.56■■□□□ 1.52
SPIRE1-202ENST00000409402 SIM2Q14190 667 aaPredicted RBP24.56■■□□□ 1.52
SPIRE1-202ENST00000409402 DCLK1O15075 740 aa24.56■■□□□ 1.52
SPIRE1-202ENST00000409402 IDH3AP50213 366 aa24.56■■□□□ 1.52
SPIRE1-202ENST00000409402 TBL1XR1Q9BZK7 514 aa24.56■■□□□ 1.52
SPIRE1-202ENST00000409402 ARHGAP39Q9C0H5 1083 aa24.56■■□□□ 1.52
SPIRE1-202ENST00000409402 S100A14Q9HCY8 104 aa24.56■■□□□ 1.52
SPIRE1-202ENST00000409402 DGKBQ9Y6T7 804 aa24.56■■□□□ 1.52
SPIRE1-202ENST00000409402 A0A0G2JN53 185 aa24.56■■□□□ 1.52
SPIRE1-202ENST00000409402 INCA1Q0VD86 236 aa24.56■■□□□ 1.52
SPIRE1-202ENST00000409402 SLC51AQ86UW1 340 aa24.56■■□□□ 1.52
SPIRE1-202ENST00000409402 SERINC5Q86VE9 423 aa24.56■■□□□ 1.52
SPIRE1-202ENST00000409402 OR4C6Q8NH72 309 aa24.56■■□□□ 1.52
SPIRE1-202ENST00000409402 RFKQ969G6 155 aa24.56■■□□□ 1.52
SPIRE1-202ENST00000409402 GPATCH1Q9BRR8 931 aaKnown RBP24.56■■□□□ 1.52
SPIRE1-202ENST00000409402 SLC32A1Q9H598 525 aa24.56■■□□□ 1.52
SPIRE1-202ENST00000409402 PIRO00625 290 aa24.55■■□□□ 1.52
SPIRE1-202ENST00000409402 IMPDH1P20839 514 aa24.55■■□□□ 1.52
SPIRE1-202ENST00000409402 TGFBR2P37173 567 aa24.55■■□□□ 1.52
SPIRE1-202ENST00000409402 RPL5P46777 297 aaKnown RBP24.55■■□□□ 1.52
SPIRE1-202ENST00000409402 DLG1Q12959 904 aa24.55■■□□□ 1.52
SPIRE1-202ENST00000409402 GIPC3Q8TF64 312 aa24.55■■□□□ 1.52
SPIRE1-202ENST00000409402 PYCR2Q96C36 320 aa24.55■■□□□ 1.52
SPIRE1-202ENST00000409402 VPS29Q9UBQ0 182 aa24.55■■□□□ 1.52
SPIRE1-202ENST00000409402 ZNF527Q8NB42 609 aa24.55■■□□□ 1.52
SPIRE1-202ENST00000409402 RBM15BQ8NDT2 890 aaKnown RBP24.55■■□□□ 1.52
SPIRE1-202ENST00000409402 P2RY13Q9BPV8 354 aa24.55■■□□□ 1.52
SPIRE1-202ENST00000409402 SERINC1Q9NRX5 453 aa24.55■■□□□ 1.52
SPIRE1-202ENST00000409402 TAC3Q9UHF0 121 aa24.55■■□□□ 1.52
SPIRE1-202ENST00000409402 DMTF1Q9Y222 760 aa24.55■■□□□ 1.52
SPIRE1-202ENST00000409402 COL1A1P02452 1464 aaPredicted RBP24.55■■□□□ 1.52
SPIRE1-202ENST00000409402 CCDC182A6NF36 153 aa24.55■■□□□ 1.52
SPIRE1-202ENST00000409402 ERI3O43414 337 aaKnown RBP24.55■■□□□ 1.52
SPIRE1-202ENST00000409402 HCRTO43612 131 aa24.55■■□□□ 1.52
SPIRE1-202ENST00000409402 SSNA1O43805 119 aa24.55■■□□□ 1.52
SPIRE1-202ENST00000409402 TMEM63AO94886 807 aa24.55■■□□□ 1.52
SPIRE1-202ENST00000409402 FADS2O95864 444 aaKnown RBP24.55■■□□□ 1.52
SPIRE1-202ENST00000409402 GPIP06744 558 aa24.55■■□□□ 1.52
SPIRE1-202ENST00000409402 ZNF823P16415 610 aa24.55■■□□□ 1.52
SPIRE1-202ENST00000409402 AHCYP23526 432 aa24.55■■□□□ 1.52
SPIRE1-202ENST00000409402 SLC29A4Q7RTT9 530 aa24.55■■□□□ 1.52
SPIRE1-202ENST00000409402 AMIGO3Q86WK7 504 aa24.55■■□□□ 1.52
SPIRE1-202ENST00000409402 COX4I2Q96KJ9 171 aa24.55■■□□□ 1.52
SPIRE1-202ENST00000409402 LENG8Q96PV6 779 aaPredicted RBP24.55■■□□□ 1.52
SPIRE1-202ENST00000409402 HNRNPA1P09651 372 aaKnown RBP eCLIP24.55■■□□□ 1.52
SPIRE1-202ENST00000409402 PTX3P26022 381 aaPredicted RBP24.55■■□□□ 1.52
SPIRE1-202ENST00000409402 ADGRG6Q86SQ4 1221 aa24.55■■□□□ 1.52
SPIRE1-202ENST00000409402 CLCC1Q96S66 551 aa24.55■■□□□ 1.52
SPIRE1-202ENST00000409402 SMURF2Q9HAU4 748 aa24.55■■□□□ 1.52
SPIRE1-202ENST00000409402 MCUBQ9NWR8 336 aa24.55■■□□□ 1.52
SPIRE1-202ENST00000409402 REM1O75628 298 aa24.55■■□□□ 1.52
SPIRE1-202ENST00000409402 RPL26P61254 145 aaKnown RBP24.55■■□□□ 1.52
SPIRE1-202ENST00000409402 SGCBQ16585 318 aa24.55■■□□□ 1.52
SPIRE1-202ENST00000409402 FRRS1Q6ZNA5 592 aa24.55■■□□□ 1.52
SPIRE1-202ENST00000409402 FAM43BQ6ZT52 329 aaPredicted RBP24.55■■□□□ 1.52
SPIRE1-202ENST00000409402 SIAH1Q8IUQ4 282 aa24.55■■□□□ 1.52
SPIRE1-202ENST00000409402 CLPTM1LQ96KA5 538 aa24.55■■□□□ 1.52
SPIRE1-202ENST00000409402 ELAC1Q9H777 363 aaKnown RBP24.55■■□□□ 1.52
SPIRE1-202ENST00000409402 KCPQ6ZWJ8 1503 aa24.54■■□□□ 1.52
SPIRE1-202ENST00000409402 CXCR6O00574 342 aa24.54■■□□□ 1.52
SPIRE1-202ENST00000409402 KLHDC7BQ96G42 594 aa24.54■■□□□ 1.52
SPIRE1-202ENST00000409402 A8MU76 341 aa24.54■■□□□ 1.52
SPIRE1-202ENST00000409402 PGM3O95394 542 aa24.54■■□□□ 1.52
SPIRE1-202ENST00000409402 TGFB1P01137 390 aa24.54■■□□□ 1.52
SPIRE1-202ENST00000409402 PLGLB1Q02325 96 aa24.54■■□□□ 1.52
SPIRE1-202ENST00000409402 PAFAH1B3Q15102 231 aaKnown RBP24.54■■□□□ 1.52
SPIRE1-202ENST00000409402 UPP1Q16831 310 aa24.54■■□□□ 1.52
SPIRE1-202ENST00000409402 SPIN4Q56A73 249 aa24.54■■□□□ 1.52
SPIRE1-202ENST00000409402 CMTR2Q8IYT2 770 aaKnown RBP24.54■■□□□ 1.52
SPIRE1-202ENST00000409402 BANPQ8N9N5 519 aa24.54■■□□□ 1.52
SPIRE1-202ENST00000409402 BADQ92934 168 aa24.54■■□□□ 1.52
SPIRE1-202ENST00000409402 PLK4O00444 970 aa24.54■■□□□ 1.52
SPIRE1-202ENST00000409402 PEX12O00623 359 aa24.54■■□□□ 1.52
SPIRE1-202ENST00000409402 SERINC3Q13530 473 aa24.54■■□□□ 1.52
SPIRE1-202ENST00000409402 PXYLP1Q8TE99 480 aa24.54■■□□□ 1.52
SPIRE1-202ENST00000409402 TFGQ92734 400 aaPredicted RBP24.54■■□□□ 1.52
SPIRE1-202ENST00000409402 KAT2AQ92830 837 aa24.54■■□□□ 1.52
SPIRE1-202ENST00000409402 NEUROD4Q9HD90 331 aa24.54■■□□□ 1.52
SPIRE1-202ENST00000409402 FAM234BA2RU67 622 aa24.54■■□□□ 1.52
SPIRE1-202ENST00000409402 A8MUA0 341 aa24.54■■□□□ 1.52
SPIRE1-202ENST00000409402 PLGP00747 810 aaPredicted RBP24.54■■□□□ 1.52
SPIRE1-202ENST00000409402 RHOP08100 348 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms