RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 TLDC1Q6P9B6 456 aa8.78□□□□□ -1
SNORD88A-201ENST00000408314 ZNF517Q6ZMY9 492 aaPredicted RBP8.78□□□□□ -1
SNORD88A-201ENST00000408314 UNC5AQ6ZN44 842 aa8.78□□□□□ -1
SNORD88A-201ENST00000408314 HPS6Q86YV9 775 aa8.78□□□□□ -1
SNORD88A-201ENST00000408314 SYTL1Q8IYJ3 562 aa8.78□□□□□ -1
SNORD88A-201ENST00000408314 DSELQ8IZU8 1212 aa8.78□□□□□ -1
SNORD88A-201ENST00000408314 RASGEF1CQ8N431 466 aa8.78□□□□□ -1
SNORD88A-201ENST00000408314 GLIS1Q8NBF1 620 aa8.78□□□□□ -1
SNORD88A-201ENST00000408314 CALML6Q8TD86 181 aa8.78□□□□□ -1
SNORD88A-201ENST00000408314 SKA2Q8WVK7 121 aaPredicted RBP8.78□□□□□ -1
SNORD88A-201ENST00000408314 DLG3Q92796 817 aa8.78□□□□□ -1
SNORD88A-201ENST00000408314 MAGOHBQ96A72 148 aaKnown RBP8.78□□□□□ -1
SNORD88A-201ENST00000408314 ZNF778Q96MU6 729 aa8.78□□□□□ -1
SNORD88A-201ENST00000408314 NLNQ9BYT8 704 aa8.78□□□□□ -1
SNORD88A-201ENST00000408314 CCDC68Q9H2F9 335 aa8.78□□□□□ -1
SNORD88A-201ENST00000408314 CLMPQ9H6B4 373 aa8.78□□□□□ -1
SNORD88A-201ENST00000408314 XKR8Q9H6D3 395 aa8.78□□□□□ -1
SNORD88A-201ENST00000408314 TXLNGQ9NUQ3 528 aa8.78□□□□□ -1
SNORD88A-201ENST00000408314 GPN3Q9UHW5 284 aaPredicted RBP8.78□□□□□ -1
SNORD88A-201ENST00000408314 SOX13Q9UN79 622 aa8.78□□□□□ -1
SNORD88A-201ENST00000408314 MRPS18BQ9Y676 258 aaKnown RBP8.78□□□□□ -1
SNORD88A-201ENST00000408314 FAM237BA0A1B0GVD1 139 aa8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 SDR42E2A6NKP2 422 aa8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 ZNF839A8K0R7 811 aa8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 E5RI56 91 aa8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 CES2O00748 559 aa8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 RASGRF2O14827 1237 aa8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 ZSCAN9O15535 394 aaPredicted RBP8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 VAPBO95292 243 aa8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 WISP1O95388 367 aa8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 KRT14P02533 472 aa8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 PIM1P11309 404 aaPredicted RBP8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 CD9P21926 228 aa8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 F8A1P23610 371 aa8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 MGAT1P26572 445 aa8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 AOAHP28039 575 aa8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 CXCR5P32302 372 aa8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 RORAP35398 523 aa8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 HSD17B2P37059 387 aa8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 CASRP41180 1078 aa8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 KCNJ1P48048 391 aa8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 FNTAP49354 379 aa8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 ARSFP54793 590 aa8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 CSE1LP55060 971 aaKnown RBP8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 EIF3BP55884 814 aaKnown RBP8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 THOC5Q13769 683 aaKnown RBP8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 KCNJ11Q14654 390 aa8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 NCF4Q15080 339 aa8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 TYSND1Q2T9J0 566 aa8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 YOD1Q5VVQ6 348 aaPredicted RBP8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 CCDC137Q6PK04 289 aaKnown RBP8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 CDHR3Q6ZTQ4 885 aa8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 ENDOVQ8N8Q3 282 aaKnown RBP8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 PRELID2Q8N945 189 aa8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 MCUQ8NE86 351 aa8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 OR2L8Q8NGY9 312 aa8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 OR1L3Q8NH93 324 aa8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 CFAP61Q8NHU2 1237 aa8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 ABHD17AQ96GS6 310 aa8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 VPS50Q96JG6 964 aa8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 OR2A14Q96R47 310 aa8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 NDC1Q9BTX1 674 aa8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 P2RY12Q9H244 342 aa8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 CHST8Q9H2A9 424 aa8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 ACSS2Q9NR19 701 aa8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 FAM114A2Q9NRY5 505 aa8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 PCMTD2Q9NV79 361 aa8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 INTS10Q9NVR2 710 aaKnown RBP8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 SYBUQ9NX95 663 aa8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 UTP6Q9NYH9 597 aaKnown RBP8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 SPATA7Q9P0W8 599 aa8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 NDOR1Q9UHB4 597 aa8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 PLCL2Q9UPR0 1127 aa8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 PCDHGB7Q9Y5F8 929 aa8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 COMMD10Q9Y6G5 202 aa8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 FAM169AQ9Y6X4 670 aa8.77□□□□□ -1.01
SNORD88A-201ENST00000408314 ZNF749O43361 778 aa8.76□□□□□ -1.01
SNORD88A-201ENST00000408314 PHF2O75151 1096 aa8.76□□□□□ -1.01
SNORD88A-201ENST00000408314 CATP04040 527 aaKnown RBP8.76□□□□□ -1.01
SNORD88A-201ENST00000408314 PVRP15151 417 aa8.76□□□□□ -1.01
SNORD88A-201ENST00000408314 NMBRP28336 390 aa8.76□□□□□ -1.01
SNORD88A-201ENST00000408314 COILP38432 576 aaPredicted RBP8.76□□□□□ -1.01
SNORD88A-201ENST00000408314 VPS41P49754 854 aa8.76□□□□□ -1.01
SNORD88A-201ENST00000408314 PGDP52209 483 aa8.76□□□□□ -1.01
SNORD88A-201ENST00000408314 CRADDP78560 199 aa8.76□□□□□ -1.01
SNORD88A-201ENST00000408314 ABRQ12979 859 aa8.76□□□□□ -1.01
SNORD88A-201ENST00000408314 DHX34Q14147 1143 aaKnown RBP8.76□□□□□ -1.01
SNORD88A-201ENST00000408314 SEMA3AQ14563 771 aa8.76□□□□□ -1.01
SNORD88A-201ENST00000408314 CYP1B1Q16678 543 aa8.76□□□□□ -1.01
SNORD88A-201ENST00000408314 TCTE1Q5JU00 501 aa8.76□□□□□ -1.01
SNORD88A-201ENST00000408314 ATP1A1-AS1Q5TC04 95 aa8.76□□□□□ -1.01
SNORD88A-201ENST00000408314 LRRC8EQ6NSJ5 796 aa8.76□□□□□ -1.01
SNORD88A-201ENST00000408314 RHBDD2Q6NTF9 364 aa8.76□□□□□ -1.01
SNORD88A-201ENST00000408314 FBXO38Q6PIJ6 1188 aa8.76□□□□□ -1.01
SNORD88A-201ENST00000408314 MED25Q71SY5 747 aa8.76□□□□□ -1.01
SNORD88A-201ENST00000408314 PRUNE1Q86TP1 453 aa8.76□□□□□ -1.01
SNORD88A-201ENST00000408314 TMEM102Q8N9M5 508 aaPredicted RBP8.76□□□□□ -1.01
SNORD88A-201ENST00000408314 TTC29Q8NA56 475 aaPredicted RBP8.76□□□□□ -1.01
SNORD88A-201ENST00000408314 TEX19Q8NA77 164 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms