RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 DCBLD1Q8N8Z6 715 aa4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 PIK3C3Q8NEB9 887 aa4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 B4GALNT2Q8NHY0 566 aa4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 ARRDC2Q8TBH0 407 aa4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 ZUFSPQ96AP4 578 aa4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 SIPA1Q96FS4 1042 aa4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 REXO5Q96IC2 774 aaKnown RBP4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 ZNF778Q96MU6 729 aa4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 OLFM1Q99784 485 aa4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 OSBPL10Q9BXB5 764 aa4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 CPEB1Q9BZB8 566 aaKnown RBP4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 CD320Q9NPF0 282 aa4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 FAM120CQ9NX05 1096 aaKnown RBP4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 SMPD3Q9NY59 655 aaPredicted RBP4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 ACTR3BQ9P1U1 418 aa4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 ACSL5Q9ULC5 683 aa4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 LOC730098B7Z3J9 87 aa4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 G3V2L1 256 aa4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 AP3D1O14617 1153 aa4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 ADAMDEC1O15204 470 aa4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 PCDH7O60245 1069 aa4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 KCNJ13O60928 360 aa4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 LILRB3O75022 631 aa4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 LEFTY1O75610 366 aa4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 RSL1D1O76021 490 aaKnown RBP4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 SEC24AO95486 1093 aa4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 SLC35G6P0C7Q6 338 aa4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 CDH1P12830 882 aa4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 PSMB9P28065 219 aa4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 GCAP28676 217 aa4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 TPP2P29144 1249 aaPredicted RBP4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 GRIA2P42262 883 aa4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 SLBPQ14493 270 aaKnown RBP eCLIP4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 PTPRCAPQ14761 206 aa4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 TRIM71Q2Q1W2 868 aaKnown RBP4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 PTCHD3Q3KNS1 767 aa4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 FBXO48Q5FWF7 155 aa4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 B3GNT6Q6ZMB0 384 aa4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 MACC1Q6ZN28 852 aa4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 Q6ZVL8 140 aa4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 KBTBD6Q86V97 674 aa4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 RALGPS2Q86X27 583 aaPredicted RBP4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 NUDT13Q86X67 352 aa4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 CLVS1Q8IUQ0 354 aaPredicted RBP4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 PHTF2Q8N3S3 785 aa4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 DDHD1Q8NEL9 900 aa4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 OR9A1PQ8NGU1 263 aa4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 ZBED6CLQ96FA7 236 aaPredicted RBP4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 ABHD8Q96I13 439 aa4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 C12orf66Q96MD2 445 aa4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 CXCL16Q9H2A7 254 aa4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 NSUN3Q9H649 340 aaKnown RBP4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 PRDM8Q9NQV8 689 aa4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 PAPOLBQ9NRJ5 636 aaKnown RBP4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 CLN6Q9NWW5 311 aa4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 AKAP7Q9P0M2 348 aaPredicted RBP4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 DNAJB9Q9UBS3 223 aa4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 KLHL3Q9UH77 587 aa4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 COMMD3-BMI1R4GMX3 469 aa4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 COL4A5P29400 1685 aa4.64□□□□□ -1.67
PCDH11X-207ENST00000406881 IRGMA1A4Y4 181 aa4.63□□□□□ -1.67
PCDH11X-207ENST00000406881 TMEM233B4DJY2 109 aa4.63□□□□□ -1.67
PCDH11X-207ENST00000406881 LDB2O43679 373 aa4.63□□□□□ -1.67
PCDH11X-207ENST00000406881 SLC28A2O43868 658 aa4.63□□□□□ -1.67
PCDH11X-207ENST00000406881 OR10H2O60403 315 aa4.63□□□□□ -1.67
PCDH11X-207ENST00000406881 TOP3BO95985 862 aaKnown RBP4.63□□□□□ -1.67
PCDH11X-207ENST00000406881 FABP3P05413 133 aa4.63□□□□□ -1.67
PCDH11X-207ENST00000406881 FGF4P08620 206 aa4.63□□□□□ -1.67
PCDH11X-207ENST00000406881 THRBP10828 461 aa4.63□□□□□ -1.67
PCDH11X-207ENST00000406881 SRCP12931 536 aa4.63□□□□□ -1.67
PCDH11X-207ENST00000406881 SYN1P17600 705 aa4.63□□□□□ -1.67
PCDH11X-207ENST00000406881 ATF6P18850 670 aa4.63□□□□□ -1.67
PCDH11X-207ENST00000406881 RPS9P46781 194 aaKnown RBP4.63□□□□□ -1.67
PCDH11X-207ENST00000406881 RFX3P48380 749 aa4.63□□□□□ -1.67
PCDH11X-207ENST00000406881 SPINT3P49223 89 aa4.63□□□□□ -1.67
PCDH11X-207ENST00000406881 MTTPP55157 894 aa4.63□□□□□ -1.67
PCDH11X-207ENST00000406881 CDKN2DP55273 166 aa4.63□□□□□ -1.67
PCDH11X-207ENST00000406881 RHDQ02161 417 aa4.63□□□□□ -1.67
PCDH11X-207ENST00000406881 ABHD18Q0P651 414 aa4.63□□□□□ -1.67
PCDH11X-207ENST00000406881 TMEM115Q12893 351 aaPredicted RBP4.63□□□□□ -1.67
PCDH11X-207ENST00000406881 BLMHQ13867 455 aa4.63□□□□□ -1.67
PCDH11X-207ENST00000406881 MRPL58Q14197 206 aaKnown RBP4.63□□□□□ -1.67
PCDH11X-207ENST00000406881 GPAT3Q53EU6 434 aa4.63□□□□□ -1.67
PCDH11X-207ENST00000406881 ZNF534Q76KX8 674 aa4.63□□□□□ -1.67
PCDH11X-207ENST00000406881 LIMS2Q7Z4I7 341 aa4.63□□□□□ -1.67
PCDH11X-207ENST00000406881 ISCA2Q86U28 154 aa4.63□□□□□ -1.67
PCDH11X-207ENST00000406881 RTN4RL1Q86UN2 441 aaPredicted RBP4.63□□□□□ -1.67
PCDH11X-207ENST00000406881 FAM124AQ86V42 546 aa4.63□□□□□ -1.67
PCDH11X-207ENST00000406881 APCDD1Q8J025 514 aa4.63□□□□□ -1.67
PCDH11X-207ENST00000406881 C10orf53Q8N6V4 93 aa4.63□□□□□ -1.67
PCDH11X-207ENST00000406881 MRPL43Q8N983 215 aaKnown RBP4.63□□□□□ -1.67
PCDH11X-207ENST00000406881 GLMNQ92990 594 aa4.63□□□□□ -1.67
PCDH11X-207ENST00000406881 NMD3Q96D46 503 aaKnown RBP4.63□□□□□ -1.67
PCDH11X-207ENST00000406881 NECTIN4Q96NY8 510 aa4.63□□□□□ -1.67
PCDH11X-207ENST00000406881 SLC38A2Q96QD8 506 aa4.63□□□□□ -1.67
PCDH11X-207ENST00000406881 ZNF347Q96SE7 839 aa4.63□□□□□ -1.67
PCDH11X-207ENST00000406881 ZIC5Q96T25 663 aa4.63□□□□□ -1.67
PCDH11X-207ENST00000406881 YTHDF1Q9BYJ9 559 aaKnown RBP4.63□□□□□ -1.67
PCDH11X-207ENST00000406881 CAPN10Q9HC96 672 aa4.63□□□□□ -1.67
PCDH11X-207ENST00000406881 IGSF5Q9NSI5 407 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms