RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 SLC31A1O15431 190 aa24.94■■□□□ 1.58
CPNE1-205ENST00000401607 PRAMEF4O60810 478 aa24.94■■□□□ 1.58
CPNE1-205ENST00000401607 SFSWAPQ12872 951 aaKnown RBP24.94■■□□□ 1.58
CPNE1-205ENST00000401607 PRAMEF9Q5VWM5 478 aa24.94■■□□□ 1.58
CPNE1-205ENST00000401607 SFRP1Q8N474 314 aa24.94■■□□□ 1.58
CPNE1-205ENST00000401607 SPDYE1Q8NFV5 336 aaPredicted RBP24.94■■□□□ 1.58
CPNE1-205ENST00000401607 GUCD1Q96NT3 240 aa24.94■■□□□ 1.58
CPNE1-205ENST00000401607 MYOCQ99972 504 aa24.94■■□□□ 1.58
CPNE1-205ENST00000401607 SLC29A3Q9BZD2 475 aa24.94■■□□□ 1.58
CPNE1-205ENST00000401607 INTS7Q9NVH2 962 aaKnown RBP24.94■■□□□ 1.58
CPNE1-205ENST00000401607 KLQ9UEF7 1012 aa24.94■■□□□ 1.58
CPNE1-205ENST00000401607 DUSP12Q9UNI6 340 aa24.94■■□□□ 1.58
CPNE1-205ENST00000401607 CCL27Q9Y4X3 112 aa24.94■■□□□ 1.58
CPNE1-205ENST00000401607 KCNE1BA0A087WTH5 132 aa24.93■■□□□ 1.58
CPNE1-205ENST00000401607 MAN2B1O00754 1011 aa24.93■■□□□ 1.58
CPNE1-205ENST00000401607 KMOO15229 486 aa24.93■■□□□ 1.58
CPNE1-205ENST00000401607 CHRNB1P11230 501 aa24.93■■□□□ 1.58
CPNE1-205ENST00000401607 STX1BP61266 288 aa24.93■■□□□ 1.58
CPNE1-205ENST00000401607 GGTA1PQ4G0N0 100 aa24.93■■□□□ 1.58
CPNE1-205ENST00000401607 AGKQ53H12 422 aa24.93■■□□□ 1.58
CPNE1-205ENST00000401607 TMEM31Q5JXX7 168 aa24.93■■□□□ 1.58
CPNE1-205ENST00000401607 PAOXQ6QHF9 649 aa24.93■■□□□ 1.58
CPNE1-205ENST00000401607 SPATA19Q7Z5L4 167 aa24.93■■□□□ 1.58
CPNE1-205ENST00000401607 PDZD3Q86UT5 571 aa24.93■■□□□ 1.58
CPNE1-205ENST00000401607 ZNF687Q8N1G0 1237 aa24.93■■□□□ 1.58
CPNE1-205ENST00000401607 OR9I1Q8NGQ6 314 aa24.93■■□□□ 1.58
CPNE1-205ENST00000401607 RCN3Q96D15 328 aa24.93■■□□□ 1.58
CPNE1-205ENST00000401607 APOOQ9BUR5 198 aa24.93■■□□□ 1.58
CPNE1-205ENST00000401607 RASSF4Q9H2L5 321 aa24.93■■□□□ 1.58
CPNE1-205ENST00000401607 CCDC167Q9P0B6 97 aa24.93■■□□□ 1.58
CPNE1-205ENST00000401607 CEACAM5P06731 702 aa24.93■■□□□ 1.58
CPNE1-205ENST00000401607 EZRP15311 586 aaKnown RBP24.93■■□□□ 1.58
CPNE1-205ENST00000401607 NAE1Q13564 534 aa24.93■■□□□ 1.58
CPNE1-205ENST00000401607 KIF19Q2TAC6 998 aa24.93■■□□□ 1.58
CPNE1-205ENST00000401607 C6orf136Q5SQH8 315 aa24.93■■□□□ 1.58
CPNE1-205ENST00000401607 THOC6Q86W42 341 aaKnown RBP24.93■■□□□ 1.58
CPNE1-205ENST00000401607 MYLK4Q86YV6 388 aaPredicted RBP24.93■■□□□ 1.58
CPNE1-205ENST00000401607 L3MBTL4Q8NA19 623 aa24.93■■□□□ 1.58
CPNE1-205ENST00000401607 FLCNQ8NFG4 579 aa24.93■■□□□ 1.58
CPNE1-205ENST00000401607 OR56A3Q8NH54 315 aa24.93■■□□□ 1.58
CPNE1-205ENST00000401607 USP7Q93009 1102 aa24.93■■□□□ 1.58
CPNE1-205ENST00000401607 THTPAQ9BU02 230 aa24.93■■□□□ 1.58
CPNE1-205ENST00000401607 FARSBQ9NSD9 589 aaKnown RBP24.93■■□□□ 1.58
CPNE1-205ENST00000401607 EBF1Q9UH73 591 aa24.93■■□□□ 1.58
CPNE1-205ENST00000401607 ZNHIT2Q9UHR6 403 aa24.93■■□□□ 1.58
CPNE1-205ENST00000401607 SLC17A4Q9Y2C5 497 aa24.93■■□□□ 1.58
CPNE1-205ENST00000401607 SEC23IPQ9Y6Y8 1000 aaKnown RBP24.93■■□□□ 1.58
CPNE1-205ENST00000401607 PRUNE2Q8WUY3 3088 aa24.92■■□□□ 1.58
CPNE1-205ENST00000401607 MANBAO00462 879 aa24.92■■□□□ 1.58
CPNE1-205ENST00000401607 AIM2O14862 343 aa24.92■■□□□ 1.58
CPNE1-205ENST00000401607 ACADVLP49748 655 aa24.92■■□□□ 1.58
CPNE1-205ENST00000401607 DIO3P55073 304 aa24.92■■□□□ 1.58
CPNE1-205ENST00000401607 GSTA3Q16772 222 aa24.92■■□□□ 1.58
CPNE1-205ENST00000401607 METRNLQ641Q3 311 aa24.92■■□□□ 1.58
CPNE1-205ENST00000401607 UNC5DQ6UXZ4 953 aa24.92■■□□□ 1.58
CPNE1-205ENST00000401607 TRIM69Q86WT6 500 aa24.92■■□□□ 1.58
CPNE1-205ENST00000401607 FUNDC1Q8IVP5 155 aa24.92■■□□□ 1.58
CPNE1-205ENST00000401607 PPFIBP2Q8ND30 876 aa24.92■■□□□ 1.58
CPNE1-205ENST00000401607 HMGB4Q8WW32 186 aa24.92■■□□□ 1.58
CPNE1-205ENST00000401607 SDR39U1Q9NRG7 319 aaPredicted RBP24.92■■□□□ 1.58
CPNE1-205ENST00000401607 AIG1Q9NVV5 245 aa24.92■■□□□ 1.58
CPNE1-205ENST00000401607 CA14Q9ULX7 337 aa24.92■■□□□ 1.58
CPNE1-205ENST00000401607 GPR45Q9Y5Y3 372 aa24.92■■□□□ 1.58
CPNE1-205ENST00000401607 LSM1O15116 133 aaKnown RBP24.91■■□□□ 1.58
CPNE1-205ENST00000401607 NUDT2P50583 147 aa24.91■■□□□ 1.58
CPNE1-205ENST00000401607 ERVK-8P63133 956 aa24.91■■□□□ 1.58
CPNE1-205ENST00000401607 MLLT1Q03111 559 aaPredicted RBP24.91■■□□□ 1.58
CPNE1-205ENST00000401607 TFF2Q03403 129 aa24.91■■□□□ 1.58
CPNE1-205ENST00000401607 MAPRE2Q15555 327 aa24.91■■□□□ 1.58
CPNE1-205ENST00000401607 ZNF852Q6ZMS4 543 aa24.91■■□□□ 1.58
CPNE1-205ENST00000401607 ARHGAP24Q8N264 748 aa24.91■■□□□ 1.58
CPNE1-205ENST00000401607 ZNF480Q8WV37 535 aa24.91■■□□□ 1.58
CPNE1-205ENST00000401607 CLPTM1LQ96KA5 538 aa24.91■■□□□ 1.58
CPNE1-205ENST00000401607 OR4K3Q96R72 315 aa24.91■■□□□ 1.58
CPNE1-205ENST00000401607 IDO1P14902 403 aa24.9■■□□□ 1.58
CPNE1-205ENST00000401607 MRPL19P49406 292 aaKnown RBP24.9■■□□□ 1.58
CPNE1-205ENST00000401607 RAP1GDS1P52306 607 aa24.9■■□□□ 1.58
CPNE1-205ENST00000401607 RIPK1Q13546 671 aa24.9■■□□□ 1.58
CPNE1-205ENST00000401607 CPSF6Q16630 551 aaKnown RBP eCLIP24.9■■□□□ 1.58
CPNE1-205ENST00000401607 ATP6AP1LQ52LC2 224 aa24.9■■□□□ 1.58
CPNE1-205ENST00000401607 PARP9Q8IXQ6 854 aa24.9■■□□□ 1.58
CPNE1-205ENST00000401607 MIER2Q8N344 545 aa24.9■■□□□ 1.58
CPNE1-205ENST00000401607 OR9A1PQ8NGU1 263 aa24.9■■□□□ 1.58
CPNE1-205ENST00000401607 OR2T34Q8NGX1 318 aa24.9■■□□□ 1.58
CPNE1-205ENST00000401607 MED8Q96G25 268 aa24.9■■□□□ 1.58
CPNE1-205ENST00000401607 ZMYND15Q9H091 742 aa24.9■■□□□ 1.58
CPNE1-205ENST00000401607 BTBD1Q9H0C5 482 aa24.9■■□□□ 1.58
CPNE1-205ENST00000401607 ITM2CQ9NQX7 267 aa24.9■■□□□ 1.58
CPNE1-205ENST00000401607 USP36Q9P275 1121 aaKnown RBP24.9■■□□□ 1.58
CPNE1-205ENST00000401607 ZNF490Q9ULM2 529 aaPredicted RBP24.9■■□□□ 1.58
CPNE1-205ENST00000401607 A0A088AWK7 358 aa24.9■■□□□ 1.58
CPNE1-205ENST00000401607 ULK1O75385 1050 aa24.9■■□□□ 1.58
CPNE1-205ENST00000401607 NME5P56597 212 aa24.9■■□□□ 1.58
CPNE1-205ENST00000401607 IRX1P78414 480 aaPredicted RBP24.9■■□□□ 1.58
CPNE1-205ENST00000401607 DMPKQ09013 629 aa24.9■■□□□ 1.58
CPNE1-205ENST00000401607 NR6A1Q15406 480 aa24.9■■□□□ 1.58
CPNE1-205ENST00000401607 TRIM46Q7Z4K8 759 aa24.9■■□□□ 1.58
CPNE1-205ENST00000401607 ULK2Q8IYT8 1036 aa24.9■■□□□ 1.58
CPNE1-205ENST00000401607 DENND6BQ8NEG7 585 aa24.9■■□□□ 1.58
CPNE1-205ENST00000401607 UHRF1Q96T88 793 aaPredicted RBP24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms