RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 TMPRSS3P57727 454 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 CALCOCO2Q13137 446 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 IL11RAQ14626 422 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 GPR19Q15760 415 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 KLHL38Q2WGJ6 581 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 TEDDM1Q5T9Z0 273 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 STEAP4Q687X5 459 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 SPESP1Q6UW49 350 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 TIPARPQ7Z3E1 657 aaKnown RBP13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 KMT5CQ86Y97 462 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 RASGRP3Q8IV61 690 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 CNTN4Q8IWV2 1026 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 FAM20CQ8IXL6 584 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 ZBED8Q8IZ13 594 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 D2HGDHQ8N465 521 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 LINC01555Q8NAE3 123 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 FLVCR1-AS1Q8TAF5 88 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 KCNJ9Q92806 393 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 OR2A14Q96R47 310 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 GPR21Q99679 349 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 ZPBPQ9BS86 351 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 PITPNM3Q9BZ71 974 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 ULBP3Q9BZM4 244 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 FGF21Q9NSA1 209 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 OR6C2Q9NZP2 312 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 WHRNQ9P202 907 aa13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 UTP11Q9Y3A2 253 aaKnown RBP13.64□□□□□ -0.23
HLA-DQB1-202ENST00000399079 MATN4O95460 622 aa13.63□□□□□ -0.23
HLA-DQB1-202ENST00000399079 FGF5P12034 268 aa13.63□□□□□ -0.23
HLA-DQB1-202ENST00000399079 UGT2B7P16662 529 aa13.63□□□□□ -0.23
HLA-DQB1-202ENST00000399079 CD9P21926 228 aa13.63□□□□□ -0.23
HLA-DQB1-202ENST00000399079 PKLRP30613 574 aa13.63□□□□□ -0.23
HLA-DQB1-202ENST00000399079 RAB28P51157 221 aa13.63□□□□□ -0.23
HLA-DQB1-202ENST00000399079 TIAL1Q01085 375 aaKnown RBP eCLIP13.63□□□□□ -0.23
HLA-DQB1-202ENST00000399079 SLC7A5Q01650 507 aa13.63□□□□□ -0.23
HLA-DQB1-202ENST00000399079 KYNUQ16719 465 aa13.63□□□□□ -0.23
HLA-DQB1-202ENST00000399079 RBM20Q5T481 1227 aaKnown RBP13.63□□□□□ -0.23
HLA-DQB1-202ENST00000399079 PWWP2BQ6NUJ5 590 aa13.63□□□□□ -0.23
HLA-DQB1-202ENST00000399079 CCDC81Q6ZN84 652 aa13.63□□□□□ -0.23
HLA-DQB1-202ENST00000399079 CAPN12Q6ZSI9 719 aa13.63□□□□□ -0.23
HLA-DQB1-202ENST00000399079 TAX1BP1Q86VP1 789 aa13.63□□□□□ -0.23
HLA-DQB1-202ENST00000399079 PPP1R3BQ86XI6 285 aa13.63□□□□□ -0.23
HLA-DQB1-202ENST00000399079 CACNA2D3Q8IZS8 1091 aa13.63□□□□□ -0.23
HLA-DQB1-202ENST00000399079 IL22RA1Q8N6P7 574 aa13.63□□□□□ -0.23
HLA-DQB1-202ENST00000399079 BBOF1Q8ND07 529 aa13.63□□□□□ -0.23
HLA-DQB1-202ENST00000399079 TRAPPC9Q96Q05 1148 aa13.63□□□□□ -0.23
HLA-DQB1-202ENST00000399079 AARSD1Q9BTE6 412 aaKnown RBP13.63□□□□□ -0.23
HLA-DQB1-202ENST00000399079 BTRCQ9Y297 605 aa13.63□□□□□ -0.23
HLA-DQB1-202ENST00000399079 TMEM184BQ9Y519 407 aaPredicted RBP13.63□□□□□ -0.23
HLA-DQB1-202ENST00000399079 ISM1B1AKI9 464 aa13.62□□□□□ -0.23
HLA-DQB1-202ENST00000399079 RAD1O60671 282 aa13.62□□□□□ -0.23
HLA-DQB1-202ENST00000399079 SPAG6O75602 509 aa13.62□□□□□ -0.23
HLA-DQB1-202ENST00000399079 PIAS1O75925 651 aa13.62□□□□□ -0.23
HLA-DQB1-202ENST00000399079 KIAA0754O94854 1291 aa13.62□□□□□ -0.23
HLA-DQB1-202ENST00000399079 DLGAP3O95886 979 aa13.62□□□□□ -0.23
HLA-DQB1-202ENST00000399079 WT1P19544 449 aaPredicted RBP13.62□□□□□ -0.23
HLA-DQB1-202ENST00000399079 PGGT1BP53609 377 aa13.62□□□□□ -0.23
HLA-DQB1-202ENST00000399079 PLTPP55058 493 aa13.62□□□□□ -0.23
HLA-DQB1-202ENST00000399079 UCNP55089 124 aa13.62□□□□□ -0.23
HLA-DQB1-202ENST00000399079 TUBB4BP68371 445 aa13.62□□□□□ -0.23
HLA-DQB1-202ENST00000399079 CKAP4Q07065 602 aaKnown RBP13.62□□□□□ -0.23
HLA-DQB1-202ENST00000399079 TUBB2AQ13885 445 aa13.62□□□□□ -0.23
HLA-DQB1-202ENST00000399079 MANEAQ5SRI9 462 aa13.62□□□□□ -0.23
HLA-DQB1-202ENST00000399079 CARFQ8N187 725 aa13.62□□□□□ -0.23
HLA-DQB1-202ENST00000399079 CD200R1Q8TD46 325 aa13.62□□□□□ -0.23
HLA-DQB1-202ENST00000399079 RAD51AP1Q96B01 352 aa13.62□□□□□ -0.23
HLA-DQB1-202ENST00000399079 ZNF501Q96CX3 271 aaPredicted RBP13.62□□□□□ -0.23
HLA-DQB1-202ENST00000399079 TRIM44Q96DX7 344 aaPredicted RBP13.62□□□□□ -0.23
HLA-DQB1-202ENST00000399079 FOPNLQ96NB1 174 aa13.62□□□□□ -0.23
HLA-DQB1-202ENST00000399079 LRRC1Q9BTT6 524 aa13.62□□□□□ -0.23
HLA-DQB1-202ENST00000399079 TUBB2BQ9BVA1 445 aa13.62□□□□□ -0.23
HLA-DQB1-202ENST00000399079 TWSG1Q9GZX9 223 aa13.62□□□□□ -0.23
HLA-DQB1-202ENST00000399079 PDE7BQ9NP56 450 aa13.62□□□□□ -0.23
HLA-DQB1-202ENST00000399079 LNPEPQ9UIQ6 1025 aa13.62□□□□□ -0.23
HLA-DQB1-202ENST00000399079 RARRES3Q9UL19 164 aa13.62□□□□□ -0.23
HLA-DQB1-202ENST00000399079 SLC39A10Q9ULF5 831 aa13.62□□□□□ -0.23
HLA-DQB1-202ENST00000399079 DHRS7Q9Y394 339 aa13.62□□□□□ -0.23
HLA-DQB1-202ENST00000399079 ESYT3A0FGR9 886 aa13.61□□□□□ -0.23
HLA-DQB1-202ENST00000399079 K7ENP7 123 aa13.61□□□□□ -0.23
HLA-DQB1-202ENST00000399079 NDC80O14777 642 aa13.61□□□□□ -0.23
HLA-DQB1-202ENST00000399079 RASGRF2O14827 1237 aa13.61□□□□□ -0.23
HLA-DQB1-202ENST00000399079 KDM1AO60341 852 aa13.61□□□□□ -0.23
HLA-DQB1-202ENST00000399079 ATP5DP30049 168 aa13.61□□□□□ -0.23
HLA-DQB1-202ENST00000399079 CDKN2DP55273 166 aa13.61□□□□□ -0.23
HLA-DQB1-202ENST00000399079 ACY1Q03154 408 aa13.61□□□□□ -0.23
HLA-DQB1-202ENST00000399079 VAC14Q08AM6 782 aa13.61□□□□□ -0.23
HLA-DQB1-202ENST00000399079 ZIC1Q15915 447 aa13.61□□□□□ -0.23
HLA-DQB1-202ENST00000399079 WHAMMP3Q1A5X7 153 aa13.61□□□□□ -0.23
HLA-DQB1-202ENST00000399079 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.61□□□□□ -0.23
HLA-DQB1-202ENST00000399079 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.61□□□□□ -0.23
HLA-DQB1-202ENST00000399079 PRAMEF17Q5VTA0 474 aa13.61□□□□□ -0.23
HLA-DQB1-202ENST00000399079 TTC23LQ6PF05 361 aa13.61□□□□□ -0.23
HLA-DQB1-202ENST00000399079 INO80CQ6PI98 192 aaPredicted RBP13.61□□□□□ -0.23
HLA-DQB1-202ENST00000399079 KIAA0408Q6ZU52 694 aa13.61□□□□□ -0.23
HLA-DQB1-202ENST00000399079 CPNE9Q8IYJ1 553 aa13.61□□□□□ -0.23
HLA-DQB1-202ENST00000399079 NLGN4XQ8N0W4 816 aa13.61□□□□□ -0.23
HLA-DQB1-202ENST00000399079 GALNT6Q8NCL4 622 aa13.61□□□□□ -0.23
HLA-DQB1-202ENST00000399079 NLGN4YQ8NFZ3 816 aaPredicted RBP13.61□□□□□ -0.23
HLA-DQB1-202ENST00000399079 FBXO25Q8TCJ0 367 aa13.61□□□□□ -0.23
HLA-DQB1-202ENST00000399079 DENND1AQ8TEH3 1009 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms