RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 VIPR1P32241 457 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 ZNF280AP59817 542 aaPredicted RBP8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 LILRA4P59901 499 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 DSTNP60981 165 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 PPP2R2BQ00005 443 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 SLC18A2Q05940 514 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 BRAT1Q6PJG6 821 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 COX18Q8N8Q8 333 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 PCDH19Q8TAB3 1148 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 XAGE5Q8WWM1 108 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 DPEP3Q9H4B8 488 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 B3GAT2Q9NPZ5 323 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 FAM120CQ9NX05 1096 aaKnown RBP8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 DTLQ9NZJ0 730 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 FBXO9Q9UK97 447 aaPredicted RBP8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 PACSIN3Q9UKS6 424 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 XRN1Q8IZH2 1706 aaKnown RBP8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 SLC16A5O15375 505 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 CST3P01034 146 aaPredicted RBP8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 RLN2P04090 185 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 SIM2Q14190 667 aaPredicted RBP8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 FASTKD3Q14CZ7 662 aaKnown RBP8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 CA9Q16790 459 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 EPGNQ6UW88 154 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 TAF8Q7Z7C8 310 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 GPR65Q8IYL9 337 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 OR10G2Q8NGC3 310 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 OR56A1Q8NGH5 318 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 OR10A6Q8NH74 314 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 SLC2A11Q9BYW1 496 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 SLC32A1Q9H598 525 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 C11orf16Q9NQ32 467 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 LYARQ9NX58 379 aaKnown RBP8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 CDC14AQ9UNH5 594 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 TIMM22Q9Y584 194 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 COL1A1P02452 1464 aaPredicted RBP8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 PRAMEF33A0A0G2JMD5 474 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 TLR4O00206 839 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 CCL16O15467 120 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 PCDH7O60245 1069 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 PRAMEF10O60809 474 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 MAPK3P27361 379 aaPredicted RBP8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 DGKGP49619 791 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 XKP51811 444 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 TIGD6Q17RP2 521 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 SLC9A4Q6AI14 798 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 SYVN1Q86TM6 617 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 ZC3H3Q8IXZ2 948 aaKnown RBP8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 CFAP206Q8IYR0 622 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 TMIEQ8NEW7 156 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 LCN9Q8WX39 176 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 FGFBP2Q9BYJ0 223 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 EBF3Q9H4W6 596 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 APOBEC3GQ9HC16 384 aaKnown RBP8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 NEUROD4Q9HD90 331 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 POLMQ9NP87 494 aaPredicted RBP8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 FLRT1Q9NZU1 646 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 FKBPLQ9UIM3 349 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 EXOSC1Q9Y3B2 195 aaKnown RBP8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 SNX10Q9Y5X0 201 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 TCRBV7S2A1N4TA0A589 114 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 WRBO00258 174 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 IFNA7P01567 189 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 ATF6P18850 670 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 HOXC12P31275 282 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 SMSP52788 366 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 GSTM4Q03013 218 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 CBLBQ13191 982 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 PLPP4Q5VZY2 271 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 CRYBG2Q8N1P7 616 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 ANKFN1Q8N957 763 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 SLC9A6Q92581 669 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 PNPLA2Q96AD5 504 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 LRRC58Q96CX6 371 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 SRMSQ9H3Y6 488 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 TMEM59LQ9UK28 342 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 SCML2Q9UQR0 700 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 ZNF451Q9Y4E5 1061 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 DAPL1A0PJW8 107 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 RCBTB2O95199 551 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 CPN2P22792 545 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 VARS2Q5ST30 1063 aaKnown RBP8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 RNF220Q5VTB9 566 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 PSRC1Q6PGN9 363 aaPredicted RBP8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 TMEM220Q6QAJ8 160 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 CADM2Q8N3J6 435 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 ZNF420Q8TAQ5 688 aaPredicted RBP8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 EQTNQ9NQ60 294 aa8.2□□□□□ -1.1
SPTLC3-201ENST00000399002 ZNF670-ZNF695F2Z2N8 137 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 RNF225M0QZC1 329 aaPredicted RBP8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 GPR25O00155 361 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 FFAR2O15552 330 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 ETS2P15036 469 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 CD72P21854 359 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 APLP1P51693 650 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 ATXN1P54253 815 aaKnown RBP8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 NRG3P56975 720 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 MAPK14Q16539 360 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 ANO7Q6IWH7 933 aa8.19□□□□□ -1.1
SPTLC3-201ENST00000399002 NANOGNBQ7Z5D8 188 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms