RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 CEP295NLQ96MC4 621 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 FEM1AQ9BSK4 669 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 CRISPLD1Q9H336 500 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 C4AP0C0L4 1744 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 EDDM13A0A1B0GTR0 161 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 TRIM43BA6NCK2 446 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 MFN2O95140 757 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 PRG2P13727 222 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 EFNA1P20827 205 aaPredicted RBP13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 PTX3P26022 381 aaPredicted RBP13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 CAPGP40121 348 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 CEP78Q5JTW2 689 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 MARCH8Q5T0T0 291 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 GPRC6AQ5T6X5 926 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 SAMD14Q8IZD0 417 aaPredicted RBP13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 CACTIN-AS1Q8N1I8 211 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 ZNF366Q8N895 744 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 ENKURQ8TC29 256 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 PIH1D2Q8WWB5 315 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 TUBGCP5Q96RT8 1024 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 OSBPL10Q9BXB5 764 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 MTRRQ9UBK8 725 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 DHRS7Q9Y394 339 aa13.94□□□□□ -0.18
PCDHGA11-201ENST00000398587 H3BNH8 94 aa13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 GTPBP1O00178 669 aaKnown RBP13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 SERPINA1P01009 418 aa13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 EBLN1P0CF75 366 aa13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 LAMP2P13473 410 aa13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 LARS2Q15031 903 aaKnown RBP13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 NDUFA9Q16795 377 aa13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 ZNF57Q68EA5 555 aaPredicted RBP13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 GOLGA7Q7Z5G4 137 aa13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 OR9I1Q8NGQ6 314 aa13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 ZNF641Q96N77 438 aaPredicted RBP13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 BRINP2Q9C0B6 783 aa13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 EHD3Q9NZN3 535 aa13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 CALML5Q9NZT1 146 aa13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 HEBP2Q9Y5Z4 205 aa13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 LOC730098B7Z3J9 87 aa13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 STC2O76061 302 aa13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 JAK1P23458 1154 aa13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 CLK3P49761 638 aaKnown RBP13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 SEC13P55735 322 aa13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 RGS21Q2M5E4 152 aa13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 PTCHD3Q3KNS1 767 aa13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 CCDC92Q53HC0 331 aaPredicted RBP13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 TECRLQ5HYJ1 363 aa13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 DCST1Q5T197 706 aa13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 FAM171BQ6P995 826 aa13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 GRASPQ7Z6J2 395 aaPredicted RBP13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 TAF8Q7Z7C8 310 aa13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 GJD3Q8N144 294 aa13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 FLCNQ8NFG4 579 aa13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 RHEBL1Q8TAI7 183 aa13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 GIPC3Q8TF64 312 aa13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 ZNF296Q8WUU4 475 aaPredicted RBP13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 S100ZQ8WXG8 99 aa13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 TMLHEQ9NVH6 421 aa13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 PPM1HQ9ULR3 514 aa13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 TMED5Q9Y3A6 229 aa13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 IRGMA1A4Y4 181 aa13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 SLC35E2BP0CK96 405 aa13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 GSK3BP49841 420 aa13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 APLP1P51693 650 aa13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 PLA2G16P53816 162 aa13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 RGS8P57771 180 aaPredicted RBP13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 NIPAL4Q0D2K0 466 aa13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 HSPB3Q12988 150 aa13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 IRAK1BP1Q5VVH5 260 aa13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 LRRTM3Q86VH5 581 aa13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 HM13Q8TCT9 377 aa13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 SLC38A4Q969I6 547 aa13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 ZC4H2Q9NQZ6 224 aa13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 TOR4AQ9NXH8 423 aa13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 PTGFRNQ9P2B2 879 aa13.93□□□□□ -0.18
PCDHGA11-201ENST00000398587 ZBTB42B2RXF5 422 aa13.92□□□□□ -0.18
PCDHGA11-201ENST00000398587 ARPC2O15144 300 aa13.92□□□□□ -0.18
PCDHGA11-201ENST00000398587 GRSF1Q12849 480 aaKnown RBP eCLIP13.92□□□□□ -0.18
PCDHGA11-201ENST00000398587 ZBTB6Q15916 424 aa13.92□□□□□ -0.18
PCDHGA11-201ENST00000398587 PPP2R2DQ66LE6 453 aa13.92□□□□□ -0.18
PCDHGA11-201ENST00000398587 MZT2AQ6P582 158 aa13.92□□□□□ -0.18
PCDHGA11-201ENST00000398587 MBOAT1Q6ZNC8 495 aa13.92□□□□□ -0.18
PCDHGA11-201ENST00000398587 TP53INP2Q8IXH6 220 aa13.92□□□□□ -0.18
PCDHGA11-201ENST00000398587 TTLQ8NG68 377 aa13.92□□□□□ -0.18
PCDHGA11-201ENST00000398587 SLC9A6Q92581 669 aa13.92□□□□□ -0.18
PCDHGA11-201ENST00000398587 IRF7Q92985 503 aa13.92□□□□□ -0.18
PCDHGA11-201ENST00000398587 SLC39A3Q9BRY0 314 aa13.92□□□□□ -0.18
PCDHGA11-201ENST00000398587 CD320Q9NPF0 282 aa13.92□□□□□ -0.18
PCDHGA11-201ENST00000398587 LRP5O75197 1615 aa13.92□□□□□ -0.18
PCDHGA11-201ENST00000398587 POP7O75817 140 aaKnown RBP13.92□□□□□ -0.18
PCDHGA11-201ENST00000398587 S1PR4O95977 384 aa13.92□□□□□ -0.18
PCDHGA11-201ENST00000398587 CKMT2P17540 419 aa13.92□□□□□ -0.18
PCDHGA11-201ENST00000398587 GDF5P43026 501 aa13.92□□□□□ -0.18
PCDHGA11-201ENST00000398587 PSMD7P51665 324 aa13.92□□□□□ -0.18
PCDHGA11-201ENST00000398587 DGKQP52824 942 aa13.92□□□□□ -0.18
PCDHGA11-201ENST00000398587 EMX2Q04743 252 aa13.92□□□□□ -0.18
PCDHGA11-201ENST00000398587 PRAMEF14Q5SWL7 426 aa13.92□□□□□ -0.18
PCDHGA11-201ENST00000398587 PRAMEF13Q5VWM6 474 aa13.92□□□□□ -0.18
PCDHGA11-201ENST00000398587 RNF44Q7L0R7 432 aa13.92□□□□□ -0.18
PCDHGA11-201ENST00000398587 LRRTM4Q86VH4 590 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms