RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 LILRB5O75023 590 aa12.13□□□□□ -0.47
SMU1-201ENST00000397149 ZNF3P17036 446 aa12.13□□□□□ -0.47
SMU1-201ENST00000397149 RPS12P25398 132 aaKnown RBP12.13□□□□□ -0.47
SMU1-201ENST00000397149 RORCP51449 518 aa12.13□□□□□ -0.47
SMU1-201ENST00000397149 KLF1Q13351 362 aaPredicted RBP12.13□□□□□ -0.47
SMU1-201ENST00000397149 VASH1Q7L8A9 365 aaPredicted RBP12.13□□□□□ -0.47
SMU1-201ENST00000397149 TOMM5Q8N4H5 51 aa12.13□□□□□ -0.47
SMU1-201ENST00000397149 C12orf29Q8N999 325 aa12.13□□□□□ -0.47
SMU1-201ENST00000397149 OR6Q1Q8NGQ2 317 aa12.13□□□□□ -0.47
SMU1-201ENST00000397149 FAM83DQ9H4H8 585 aa12.13□□□□□ -0.47
SMU1-201ENST00000397149 CLDN9O95484 217 aa12.12□□□□□ -0.47
SMU1-201ENST00000397149 OGNP20774 298 aaKnown RBP12.12□□□□□ -0.47
SMU1-201ENST00000397149 KRBOX4Q5JUW0 171 aa12.12□□□□□ -0.47
SMU1-201ENST00000397149 CARD17Q5XLA6 110 aa12.12□□□□□ -0.47
SMU1-201ENST00000397149 SLC29A4Q7RTT9 530 aa12.12□□□□□ -0.47
SMU1-201ENST00000397149 SLC44A3Q8N4M1 653 aa12.12□□□□□ -0.47
SMU1-201ENST00000397149 STK35Q8TDR2 534 aa12.12□□□□□ -0.47
SMU1-201ENST00000397149 ARNTL2Q8WYA1 636 aa12.12□□□□□ -0.47
SMU1-201ENST00000397149 PCTPQ9UKL6 214 aa12.12□□□□□ -0.47
SMU1-201ENST00000397149 PCYT1BQ9Y5K3 369 aaPredicted RBP12.12□□□□□ -0.47
SMU1-201ENST00000397149 A0A0G2JMP0 313 aa12.12□□□□□ -0.47
SMU1-201ENST00000397149 PDYNP01213 254 aa12.12□□□□□ -0.47
SMU1-201ENST00000397149 ATP5A1P25705 553 aaKnown RBP12.12□□□□□ -0.47
SMU1-201ENST00000397149 ENPP2Q13822 863 aa12.12□□□□□ -0.47
SMU1-201ENST00000397149 ZNF267Q14586 743 aaPredicted RBP12.12□□□□□ -0.47
SMU1-201ENST00000397149 C6orf183Q5T699 404 aa12.12□□□□□ -0.47
SMU1-201ENST00000397149 EIF5AL1Q6IS14 154 aaKnown RBP12.12□□□□□ -0.47
SMU1-201ENST00000397149 FAM83HQ6ZRV2 1179 aaPredicted RBP12.12□□□□□ -0.47
SMU1-201ENST00000397149 NLGN4XQ8N0W4 816 aa12.12□□□□□ -0.47
SMU1-201ENST00000397149 NXPE1Q8N323 547 aa12.12□□□□□ -0.47
SMU1-201ENST00000397149 OR4M2Q8NGB6 313 aa12.12□□□□□ -0.47
SMU1-201ENST00000397149 OR56B2PQ8NGI1 322 aa12.12□□□□□ -0.47
SMU1-201ENST00000397149 MIPEPQ99797 713 aa12.12□□□□□ -0.47
SMU1-201ENST00000397149 SLC6A7Q99884 636 aa12.12□□□□□ -0.47
SMU1-201ENST00000397149 DDX4Q9NQI0 724 aaKnown RBP12.12□□□□□ -0.47
SMU1-201ENST00000397149 DNAJC28Q9NX36 388 aa12.12□□□□□ -0.47
SMU1-201ENST00000397149 BACE2Q9Y5Z0 518 aa12.12□□□□□ -0.47
SMU1-201ENST00000397149 HEBP2Q9Y5Z4 205 aa12.12□□□□□ -0.47
SMU1-201ENST00000397149 ZNF705FA8MVS1 300 aaPredicted RBP12.12□□□□□ -0.47
SMU1-201ENST00000397149 BLOC1S5-TXNDC5H3BN57 136 aa12.12□□□□□ -0.47
SMU1-201ENST00000397149 CCL22O00626 93 aa12.12□□□□□ -0.47
SMU1-201ENST00000397149 ZNF705DP0CH99 300 aaPredicted RBP12.12□□□□□ -0.47
SMU1-201ENST00000397149 ZNF705BP0CI00 300 aaPredicted RBP12.12□□□□□ -0.47
SMU1-201ENST00000397149 RNF144AP50876 292 aaPredicted RBP12.12□□□□□ -0.47
SMU1-201ENST00000397149 OR10A6Q8NH74 314 aa12.12□□□□□ -0.47
SMU1-201ENST00000397149 HNRNPLLQ8WVV9 542 aaKnown RBP12.12□□□□□ -0.47
SMU1-201ENST00000397149 FBXO5Q9UKT4 447 aa12.12□□□□□ -0.47
SMU1-201ENST00000397149 TACSTD2P09758 323 aa12.12□□□□□ -0.47
SMU1-201ENST00000397149 RPIAP49247 311 aa12.12□□□□□ -0.47
SMU1-201ENST00000397149 ZNF136P52737 540 aa12.12□□□□□ -0.47
SMU1-201ENST00000397149 ILF2Q12905 390 aaKnown RBP12.12□□□□□ -0.47
SMU1-201ENST00000397149 RPA4Q13156 261 aa12.12□□□□□ -0.47
SMU1-201ENST00000397149 GTF2H2Q13888 395 aa12.12□□□□□ -0.47
SMU1-201ENST00000397149 GTF2H2CQ6P1K8 395 aa12.12□□□□□ -0.47
SMU1-201ENST00000397149 COPS5Q92905 334 aa12.12□□□□□ -0.47
SMU1-201ENST00000397149 TMEM125Q96AQ2 219 aa12.12□□□□□ -0.47
SMU1-201ENST00000397149 KCNC2Q96PR1 638 aa12.12□□□□□ -0.47
SMU1-201ENST00000397149 C7orf50Q9BRJ6 194 aaKnown RBP12.12□□□□□ -0.47
SMU1-201ENST00000397149 MRPS30Q9NP92 439 aaKnown RBP12.12□□□□□ -0.47
SMU1-201ENST00000397149 PAK6Q9NQU5 681 aaPredicted RBP12.12□□□□□ -0.47
SMU1-201ENST00000397149 MAN2C1Q9NTJ4 1040 aa12.12□□□□□ -0.47
SMU1-201ENST00000397149 PCYOX1Q9UHG3 505 aa12.12□□□□□ -0.47
SMU1-201ENST00000397149 METP08581 1390 aa12.12□□□□□ -0.47
SMU1-201ENST00000397149 PRR5-ARHGAP8B1AHC4 643 aa12.12□□□□□ -0.47
SMU1-201ENST00000397149 FARS2O95363 451 aaKnown RBP12.12□□□□□ -0.47
SMU1-201ENST00000397149 IFNA7P01567 189 aa12.12□□□□□ -0.47
SMU1-201ENST00000397149 GRIA1P42261 906 aa12.12□□□□□ -0.47
SMU1-201ENST00000397149 ARHGAP8P85298 464 aa12.12□□□□□ -0.47
SMU1-201ENST00000397149 NFATC4Q14934 902 aa12.12□□□□□ -0.47
SMU1-201ENST00000397149 SLC39A4Q6P5W5 647 aa12.12□□□□□ -0.47
SMU1-201ENST00000397149 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.12□□□□□ -0.47
SMU1-201ENST00000397149 MFSD2AQ8NA29 543 aa12.12□□□□□ -0.47
SMU1-201ENST00000397149 PDPRQ8NCN5 879 aa12.12□□□□□ -0.47
SMU1-201ENST00000397149 HSPA12BQ96MM6 686 aa12.12□□□□□ -0.47
SMU1-201ENST00000397149 ANKRA2Q9H9E1 313 aa12.12□□□□□ -0.47
SMU1-201ENST00000397149 SMURF2Q9HAU4 748 aa12.12□□□□□ -0.47
SMU1-201ENST00000397149 INPPL1O15357 1258 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 C1RP00736 705 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 NR2C1P13056 603 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 CREMQ03060 361 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 OXR1Q8N573 874 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 DTX3Q8N9I9 347 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 CYP2W1Q8TAV3 490 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 CAVIN3Q969G5 261 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 MKL1Q969V6 931 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 NODALQ96S42 347 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 IPPKQ9H8X2 491 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 ATXN7L1Q9ULK2 861 aaPredicted RBP12.11□□□□□ -0.47
SMU1-201ENST00000397149 A0A1W2PQH9 124 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 PLD2O14939 933 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 ADAMTS3O15072 1205 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 PRKD3O94806 890 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 HCAR3P49019 387 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 TMEM220Q6QAJ8 160 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 TWIST2Q8WVJ9 160 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 HMGB4Q8WW32 186 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 FRZBQ92765 325 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 DUS2Q9NX74 493 aaKnown RBP12.11□□□□□ -0.47
SMU1-201ENST00000397149 EML1O00423 815 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 SCGB2A1O75556 95 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms