RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 RHDQ02161 417 aa12.92□□□□□ -0.34
SEC13-209ENST00000397117 PLOD1Q02809 727 aaPredicted RBP12.92□□□□□ -0.34
SEC13-209ENST00000397117 ASPHQ12797 758 aa12.92□□□□□ -0.34
SEC13-209ENST00000397117 NFATC4Q14934 902 aa12.92□□□□□ -0.34
SEC13-209ENST00000397117 PCLAFQ15004 111 aa12.92□□□□□ -0.34
SEC13-209ENST00000397117 OR4D1Q15615 310 aa12.92□□□□□ -0.34
SEC13-209ENST00000397117 CHI3L2Q15782 390 aa12.92□□□□□ -0.34
SEC13-209ENST00000397117 ATG16L1Q676U5 607 aa12.92□□□□□ -0.34
SEC13-209ENST00000397117 ENPP7Q6UWV6 458 aa12.92□□□□□ -0.34
SEC13-209ENST00000397117 GCNT7Q6ZNI0 430 aa12.92□□□□□ -0.34
SEC13-209ENST00000397117 ADAMTSL2Q86TH1 951 aa12.92□□□□□ -0.34
SEC13-209ENST00000397117 AMZ2Q86W34 360 aa12.92□□□□□ -0.34
SEC13-209ENST00000397117 GALNT13Q8IUC8 556 aa12.92□□□□□ -0.34
SEC13-209ENST00000397117 ZNF547Q8IVP9 402 aa12.92□□□□□ -0.34
SEC13-209ENST00000397117 TMEM151AQ8N4L1 468 aa12.92□□□□□ -0.34
SEC13-209ENST00000397117 OR56A4Q8NGH8 313 aa12.92□□□□□ -0.34
SEC13-209ENST00000397117 OR2L2Q8NH16 312 aa12.92□□□□□ -0.34
SEC13-209ENST00000397117 HM13Q8TCT9 377 aa12.92□□□□□ -0.34
SEC13-209ENST00000397117 ZNF75CPQ92670 426 aaPredicted RBP12.92□□□□□ -0.34
SEC13-209ENST00000397117 CCDC126Q96EE4 140 aa12.92□□□□□ -0.34
SEC13-209ENST00000397117 BMFQ96LC9 184 aa12.92□□□□□ -0.34
SEC13-209ENST00000397117 WDR92Q96MX6 357 aa12.92□□□□□ -0.34
SEC13-209ENST00000397117 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.92□□□□□ -0.34
SEC13-209ENST00000397117 SIRPGQ9P1W8 387 aa12.92□□□□□ -0.34
SEC13-209ENST00000397117 PIKFYVEQ9Y2I7 2098 aa12.92□□□□□ -0.34
SEC13-209ENST00000397117 KIF26BQ2KJY2 2108 aa12.92□□□□□ -0.34
SEC13-209ENST00000397117 COL27A1Q8IZC6 1860 aaPredicted RBP12.92□□□□□ -0.34
SEC13-209ENST00000397117 PABPN1LA6NDY0 278 aaKnown RBP12.91□□□□□ -0.34
SEC13-209ENST00000397117 MGAT4DA6NG13 374 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 TCP11X1B4DZS4 312 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 SUPT3HB4E1H0 165 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 TARM1B6A8C7 271 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 SUPT3HO75486 399 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 GPC4O75487 556 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 SLCO2B1O94956 709 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 CEACAM5P06731 702 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 VIMP08670 466 aaKnown RBP12.91□□□□□ -0.34
SEC13-209ENST00000397117 SBK3P0C264 359 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 TPBGLP0DKB5 382 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 MPC1LP0DKB6 136 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 CKMT1AP12532 417 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 VCLP18206 1134 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 ATP5F1P24539 256 aaPredicted RBP12.91□□□□□ -0.34
SEC13-209ENST00000397117 LSSP48449 732 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 PFN3P60673 137 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 DAB2P98082 770 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 GBX1Q14549 363 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 Q6ZSR6 202 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 NEK10Q6ZWH5 1172 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 GPSM1Q86YR5 675 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 SLC22A9Q8IVM8 553 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 LSMEM2Q8N112 164 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 RAB3IL1Q8TBN0 382 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 FAM174AQ8TBP5 190 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 GLMNQ92990 594 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 NAF1Q96HR8 494 aaKnown RBP12.91□□□□□ -0.34
SEC13-209ENST00000397117 CAAP1Q9H8G2 361 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 OXSMQ9NWU1 459 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 SSUH2Q9Y2M2 353 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 LY6G6EA0A0G2JKS1 128 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 SLC5A10A0PJK1 596 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 H3BM21 787 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 DLX3O60479 287 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 SNX2O60749 519 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 TRIM13O60858 407 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 H2AFYO75367 372 aaKnown RBP12.91□□□□□ -0.34
SEC13-209ENST00000397117 PIAS2O75928 621 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 S100BP04271 92 aaPredicted RBP12.91□□□□□ -0.34
SEC13-209ENST00000397117 THEGLP0DJG4 465 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 GFAPP14136 432 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 MAPK9P45984 424 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 GNPDA1P46926 289 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 PREPP48147 710 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 PRKAA2P54646 552 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 UCNP55089 124 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 TMPRSS3P57727 454 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 ERVPABLB-1P60509 514 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 PTK2BQ14289 1009 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 LIPMQ5VYY2 423 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 CYHR1Q6ZMK1 362 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 CHST15Q7LFX5 561 aaPredicted RBP12.91□□□□□ -0.34
SEC13-209ENST00000397117 ABI3BPQ7Z7G0 1075 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 C11orf96Q7Z7L8 435 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 VRK3Q8IV63 474 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 CHMP6Q96FZ7 201 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 FOPNLQ96NB1 174 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 COG4Q9H9E3 785 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 CPNE5Q9HCH3 593 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 CYP4F12Q9HCS2 524 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 KLQ9UEF7 1012 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 IKZF3Q9UKT9 509 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 TMCO1Q9UM00 188 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 SUFUQ9UMX1 484 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 CDYLQ9Y232 598 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 DNAJC16Q9Y2G8 782 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 U3KQA8 63 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 RP1P56715 2156 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 PIEZO2Q9H5I5 2752 aa12.91□□□□□ -0.34
SEC13-209ENST00000397117 PRSS38A1L453 326 aa12.9□□□□□ -0.34
SEC13-209ENST00000397117 GMNCA6NCL1 334 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms