RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 RAET1GQ6H3X3 334 aa15.75■□□□□ 0.11
SNX6-202ENST00000396526 VRK3Q8IV63 474 aa15.75■□□□□ 0.11
SNX6-202ENST00000396526 ST13P4Q8IZP2 240 aaPredicted RBP15.75■□□□□ 0.11
SNX6-202ENST00000396526 LIX1Q8N485 282 aa15.75■□□□□ 0.11
SNX6-202ENST00000396526 BEND7Q8N7W2 519 aaPredicted RBP15.75■□□□□ 0.11
SNX6-202ENST00000396526 TERB1Q8NA31 727 aa15.75■□□□□ 0.11
SNX6-202ENST00000396526 SLC13A3Q8WWT9 602 aa15.75■□□□□ 0.11
SNX6-202ENST00000396526 GATA6Q92908 595 aa15.75■□□□□ 0.11
SNX6-202ENST00000396526 NUS1Q96E22 293 aa15.75■□□□□ 0.11
SNX6-202ENST00000396526 ATG10Q9H0Y0 220 aa15.75■□□□□ 0.11
SNX6-202ENST00000396526 CXorf56Q9H5V9 222 aa15.75■□□□□ 0.11
SNX6-202ENST00000396526 YY1AP1Q9H869 796 aa15.75■□□□□ 0.11
SNX6-202ENST00000396526 RMND5AQ9H871 391 aa15.75■□□□□ 0.11
SNX6-202ENST00000396526 CERS4Q9HA82 394 aa15.75■□□□□ 0.11
SNX6-202ENST00000396526 SLC52A3Q9NQ40 469 aa15.75■□□□□ 0.11
SNX6-202ENST00000396526 PRRT4C9JH25 899 aa15.74■□□□□ 0.11
SNX6-202ENST00000396526 H3BM21 787 aa15.74■□□□□ 0.11
SNX6-202ENST00000396526 ITPKAP23677 461 aa15.74■□□□□ 0.11
SNX6-202ENST00000396526 CHIT1Q13231 466 aa15.74■□□□□ 0.11
SNX6-202ENST00000396526 LIPJQ5W064 366 aa15.74■□□□□ 0.11
SNX6-202ENST00000396526 L3MBTL4Q8NA19 623 aa15.74■□□□□ 0.11
SNX6-202ENST00000396526 CXorf40AQ8TE69 158 aa15.74■□□□□ 0.11
SNX6-202ENST00000396526 RAB7BQ96AH8 199 aa15.74■□□□□ 0.11
SNX6-202ENST00000396526 PYCR2Q96C36 320 aa15.74■□□□□ 0.11
SNX6-202ENST00000396526 LRCH3Q96II8 777 aa15.74■□□□□ 0.11
SNX6-202ENST00000396526 OSBPL6Q9BZF3 934 aa15.74■□□□□ 0.11
SNX6-202ENST00000396526 ARMC1Q9NVT9 282 aa15.74■□□□□ 0.11
SNX6-202ENST00000396526 HLA-EP13747 358 aa15.74■□□□□ 0.11
SNX6-202ENST00000396526 FASP25445 335 aa15.74■□□□□ 0.11
SNX6-202ENST00000396526 FRG2Q64ET8 278 aa15.74■□□□□ 0.11
SNX6-202ENST00000396526 SPPL2CQ8IUH8 684 aa15.74■□□□□ 0.11
SNX6-202ENST00000396526 TRAPPC5Q8IUR0 188 aa15.74■□□□□ 0.11
SNX6-202ENST00000396526 GALNT4Q8N4A0 578 aa15.74■□□□□ 0.11
SNX6-202ENST00000396526 RASGEF1AQ8N9B8 481 aa15.74■□□□□ 0.11
SNX6-202ENST00000396526 CANT1Q8WVQ1 401 aa15.74■□□□□ 0.11
SNX6-202ENST00000396526 RSPRY1Q96DX4 576 aa15.74■□□□□ 0.11
SNX6-202ENST00000396526 FRG2BQ96QU4 278 aa15.74■□□□□ 0.11
SNX6-202ENST00000396526 CGREF1Q99674 301 aa15.74■□□□□ 0.11
SNX6-202ENST00000396526 CCM2LQ9NUG4 571 aaPredicted RBP15.74■□□□□ 0.11
SNX6-202ENST00000396526 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.74■□□□□ 0.11
SNX6-202ENST00000396526 RECQL5O94762 991 aaPredicted RBP15.73■□□□□ 0.11
SNX6-202ENST00000396526 MYO1DO94832 1006 aa15.73■□□□□ 0.11
SNX6-202ENST00000396526 LYNP07948 512 aa15.73■□□□□ 0.11
SNX6-202ENST00000396526 IL12AP29459 219 aa15.73■□□□□ 0.11
SNX6-202ENST00000396526 C9orf64Q5T6V5 341 aa15.73■□□□□ 0.11
SNX6-202ENST00000396526 SLC2A7Q6PXP3 512 aa15.73■□□□□ 0.11
SNX6-202ENST00000396526 NXPE3Q969Y0 559 aa15.73■□□□□ 0.11
SNX6-202ENST00000396526 CMTM7Q96FZ5 175 aa15.73■□□□□ 0.11
SNX6-202ENST00000396526 MAGEL2Q9UJ55 1249 aa15.73■□□□□ 0.11
SNX6-202ENST00000396526 H0YJX3 145 aa15.73■□□□□ 0.11
SNX6-202ENST00000396526 HTR1EP28566 365 aa15.73■□□□□ 0.11
SNX6-202ENST00000396526 PBLDP30039 288 aaPredicted RBP15.73■□□□□ 0.11
SNX6-202ENST00000396526 RPS14P62263 151 aaKnown RBP15.73■□□□□ 0.11
SNX6-202ENST00000396526 ZNF234Q14588 700 aa15.73■□□□□ 0.11
SNX6-202ENST00000396526 CYP51A1Q16850 503 aa15.73■□□□□ 0.11
SNX6-202ENST00000396526 RABL3Q5HYI8 236 aa15.73■□□□□ 0.11
SNX6-202ENST00000396526 COQ10AQ96MF6 247 aa15.73■□□□□ 0.11
SNX6-202ENST00000396526 NSMCE2Q96MF7 247 aa15.73■□□□□ 0.11
SNX6-202ENST00000396526 FAM83CQ9BQN1 747 aa15.73■□□□□ 0.11
SNX6-202ENST00000396526 FARSBQ9NSD9 589 aaKnown RBP15.73■□□□□ 0.11
SNX6-202ENST00000396526 CCL27Q9Y4X3 112 aa15.73■□□□□ 0.11
SNX6-202ENST00000396526 ARPC2O15144 300 aa15.73■□□□□ 0.11
SNX6-202ENST00000396526 PSIP1O75475 530 aaKnown RBP15.73■□□□□ 0.11
SNX6-202ENST00000396526 SMNDC1O75940 238 aaKnown RBP eCLIP15.73■□□□□ 0.11
SNX6-202ENST00000396526 PDYNP01213 254 aa15.73■□□□□ 0.11
SNX6-202ENST00000396526 ADRB3P13945 408 aa15.73■□□□□ 0.11
SNX6-202ENST00000396526 S100A3P33764 101 aa15.73■□□□□ 0.11
SNX6-202ENST00000396526 HNF4AP41235 474 aa15.73■□□□□ 0.11
SNX6-202ENST00000396526 XKR6Q5GH73 641 aa15.73■□□□□ 0.11
SNX6-202ENST00000396526 ZNF648Q5T619 568 aaPredicted RBP15.73■□□□□ 0.11
SNX6-202ENST00000396526 ERN2Q76MJ5 926 aaKnown RBP15.73■□□□□ 0.11
SNX6-202ENST00000396526 LILRA2Q8N149 483 aa15.73■□□□□ 0.11
SNX6-202ENST00000396526 LRTOMTQ8WZ04 291 aa15.73■□□□□ 0.11
SNX6-202ENST00000396526 PPM1MQ96MI6 270 aa15.73■□□□□ 0.11
SNX6-202ENST00000396526 THUMPD3Q9BV44 507 aaKnown RBP15.73■□□□□ 0.11
SNX6-202ENST00000396526 IGFLR1Q9H665 355 aa15.73■□□□□ 0.11
SNX6-202ENST00000396526 ITM2BQ9Y287 266 aa15.73■□□□□ 0.11
SNX6-202ENST00000396526 KCNE2Q9Y6J6 123 aa15.73■□□□□ 0.11
SNX6-202ENST00000396526 ZNF106Q9H2Y7 1883 aaKnown RBP15.73■□□□□ 0.11
SNX6-202ENST00000396526 SCN8AQ9UQD0 1980 aa15.73■□□□□ 0.11
SNX6-202ENST00000396526 GSTA4O15217 222 aa15.72■□□□□ 0.11
SNX6-202ENST00000396526 JUPP14923 745 aa15.72■□□□□ 0.11
SNX6-202ENST00000396526 DGKQP52824 942 aa15.72■□□□□ 0.11
SNX6-202ENST00000396526 CTSCP53634 463 aa15.72■□□□□ 0.11
SNX6-202ENST00000396526 NAE1Q13564 534 aa15.72■□□□□ 0.11
SNX6-202ENST00000396526 PDK3Q15120 406 aa15.72■□□□□ 0.11
SNX6-202ENST00000396526 FAM174BQ3ZCQ3 159 aa15.72■□□□□ 0.11
SNX6-202ENST00000396526 AGTRAPQ6RW13 159 aa15.72■□□□□ 0.11
SNX6-202ENST00000396526 ZBTB49Q6ZSB9 765 aa15.72■□□□□ 0.11
SNX6-202ENST00000396526 OR8J3Q8NGG0 315 aa15.72■□□□□ 0.11
SNX6-202ENST00000396526 CSGALNACT1Q8TDX6 532 aa15.72■□□□□ 0.11
SNX6-202ENST00000396526 MED8Q96G25 268 aa15.72■□□□□ 0.11
SNX6-202ENST00000396526 RUNX3Q13761 415 aa15.72■□□□□ 0.11
SNX6-202ENST00000396526 PTGR1Q14914 329 aa15.72■□□□□ 0.11
SNX6-202ENST00000396526 THOC6Q86W42 341 aaKnown RBP15.72■□□□□ 0.11
SNX6-202ENST00000396526 PTRH1Q86Y79 214 aaKnown RBP15.72■□□□□ 0.11
SNX6-202ENST00000396526 DNAJC5GQ8N7S2 189 aa15.72■□□□□ 0.11
SNX6-202ENST00000396526 TMEM102Q8N9M5 508 aaPredicted RBP15.72■□□□□ 0.11
SNX6-202ENST00000396526 GBP5Q96PP8 586 aa15.72■□□□□ 0.11
SNX6-202ENST00000396526 OR52E6Q96RD3 313 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 173.5 ms