RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 ATP6V1E2Q96A05 226 aa19.86■□□□□ 0.77
VCPKMT-202ENST00000395860 PYCR2Q96C36 320 aa19.86■□□□□ 0.77
VCPKMT-202ENST00000395860 FERD3LQ96RJ6 166 aa19.86■□□□□ 0.77
VCPKMT-202ENST00000395860 IPPKQ9H8X2 491 aa19.86■□□□□ 0.77
VCPKMT-202ENST00000395860 IMP3Q9NV31 184 aaKnown RBP19.86■□□□□ 0.77
VCPKMT-202ENST00000395860 VCANP13611 3396 aa19.86■□□□□ 0.77
VCPKMT-202ENST00000395860 TDRD6O60522 2096 aaKnown RBP19.86■□□□□ 0.77
VCPKMT-202ENST00000395860 TMEM233B4DJY2 109 aa19.85■□□□□ 0.77
VCPKMT-202ENST00000395860 CTSEP14091 401 aa19.85■□□□□ 0.77
VCPKMT-202ENST00000395860 EPB42P16452 691 aa19.85■□□□□ 0.77
VCPKMT-202ENST00000395860 IMPA1P29218 277 aa19.85■□□□□ 0.77
VCPKMT-202ENST00000395860 DUS1LQ6P1R4 473 aaKnown RBP19.85■□□□□ 0.77
VCPKMT-202ENST00000395860 C11orf74Q86VG3 221 aa19.85■□□□□ 0.77
VCPKMT-202ENST00000395860 TBC1D21Q8IYX1 336 aa19.85■□□□□ 0.77
VCPKMT-202ENST00000395860 PHACTR4Q8IZ21 702 aa19.85■□□□□ 0.77
VCPKMT-202ENST00000395860 C1orf216Q8TAB5 229 aa19.85■□□□□ 0.77
VCPKMT-202ENST00000395860 GAB3Q8WWW8 586 aa19.85■□□□□ 0.77
VCPKMT-202ENST00000395860 FAR2Q96K12 515 aa19.85■□□□□ 0.77
VCPKMT-202ENST00000395860 ZNF382Q96SR6 550 aa19.85■□□□□ 0.77
VCPKMT-202ENST00000395860 TCEAL2Q9H3H9 227 aaPredicted RBP19.85■□□□□ 0.77
VCPKMT-202ENST00000395860 TNFRSF12AQ9NP84 129 aa19.85■□□□□ 0.77
VCPKMT-202ENST00000395860 VTI1BQ9UEU0 232 aa19.85■□□□□ 0.77
VCPKMT-202ENST00000395860 TBC1D29Q9UFV1 150 aa19.85■□□□□ 0.77
VCPKMT-202ENST00000395860 KLF15Q9UIH9 416 aa19.85■□□□□ 0.77
VCPKMT-202ENST00000395860 STK38LQ9Y2H1 464 aa19.85■□□□□ 0.77
VCPKMT-202ENST00000395860 TRAF6Q9Y4K3 522 aa19.85■□□□□ 0.77
VCPKMT-202ENST00000395860 MATN2O00339 956 aa19.85■□□□□ 0.77
VCPKMT-202ENST00000395860 HDAC3O15379 428 aa19.85■□□□□ 0.77
VCPKMT-202ENST00000395860 CCNG1P51959 295 aa19.85■□□□□ 0.77
VCPKMT-202ENST00000395860 PRKG2Q13237 762 aa19.85■□□□□ 0.77
VCPKMT-202ENST00000395860 SNX31Q8N9S9 440 aa19.85■□□□□ 0.77
VCPKMT-202ENST00000395860 OR52B6Q8NGF0 335 aa19.85■□□□□ 0.77
VCPKMT-202ENST00000395860 MED8Q96G25 268 aa19.85■□□□□ 0.77
VCPKMT-202ENST00000395860 GSDMCQ9BYG8 508 aa19.85■□□□□ 0.77
VCPKMT-202ENST00000395860 DNAJC28Q9NX36 388 aa19.85■□□□□ 0.77
VCPKMT-202ENST00000395860 TNRC6BQ9UPQ9 1833 aaKnown RBP19.84■□□□□ 0.77
VCPKMT-202ENST00000395860 OR7A17O14581 309 aa19.84■□□□□ 0.77
VCPKMT-202ENST00000395860 BCAT2O15382 392 aaPredicted RBP19.84■□□□□ 0.77
VCPKMT-202ENST00000395860 KATNA1O75449 491 aa19.84■□□□□ 0.77
VCPKMT-202ENST00000395860 CRCPO75575 148 aa19.84■□□□□ 0.77
VCPKMT-202ENST00000395860 ESRRBO95718 433 aa19.84■□□□□ 0.77
VCPKMT-202ENST00000395860 OTCP00480 354 aa19.84■□□□□ 0.77
VCPKMT-202ENST00000395860 ALOX15P16050 662 aaPredicted RBP19.84■□□□□ 0.77
VCPKMT-202ENST00000395860 ITPKAP23677 461 aa19.84■□□□□ 0.77
VCPKMT-202ENST00000395860 DHPSP49366 369 aaPredicted RBP19.84■□□□□ 0.77
VCPKMT-202ENST00000395860 PKNOX1P55347 436 aa19.84■□□□□ 0.77
VCPKMT-202ENST00000395860 SRSF5Q13243 272 aaKnown RBP19.84■□□□□ 0.77
VCPKMT-202ENST00000395860 NAE1Q13564 534 aa19.84■□□□□ 0.77
VCPKMT-202ENST00000395860 KRT33BQ14525 404 aa19.84■□□□□ 0.77
VCPKMT-202ENST00000395860 CLEC6AQ6EIG7 209 aa19.84■□□□□ 0.77
VCPKMT-202ENST00000395860 ABRAXAS1Q6UWZ7 409 aa19.84■□□□□ 0.77
VCPKMT-202ENST00000395860 WASH2PQ6VEQ5 465 aa19.84■□□□□ 0.77
VCPKMT-202ENST00000395860 GPRIN3Q6ZVF9 776 aa19.84■□□□□ 0.77
VCPKMT-202ENST00000395860 MAVSQ7Z434 540 aa19.84■□□□□ 0.77
VCPKMT-202ENST00000395860 SYVN1Q86TM6 617 aa19.84■□□□□ 0.77
VCPKMT-202ENST00000395860 NRROSQ86YC3 692 aa19.84■□□□□ 0.77
VCPKMT-202ENST00000395860 SYTL1Q8IYJ3 562 aa19.84■□□□□ 0.77
VCPKMT-202ENST00000395860 CLYBLQ8N0X4 340 aa19.84■□□□□ 0.77
VCPKMT-202ENST00000395860 PPFIBP2Q8ND30 876 aa19.84■□□□□ 0.77
VCPKMT-202ENST00000395860 GPBAR1Q8TDU6 330 aa19.84■□□□□ 0.77
VCPKMT-202ENST00000395860 ZNF480Q8WV37 535 aa19.84■□□□□ 0.77
VCPKMT-202ENST00000395860 SKA1Q96BD8 255 aa19.84■□□□□ 0.77
VCPKMT-202ENST00000395860 PLCD4Q9BRC7 762 aa19.84■□□□□ 0.77
VCPKMT-202ENST00000395860 WASH6PQ9NQA3 447 aa19.84■□□□□ 0.77
VCPKMT-202ENST00000395860 DNAJC11Q9NVH1 559 aa19.84■□□□□ 0.77
VCPKMT-202ENST00000395860 FBXO4Q9UKT5 387 aa19.84■□□□□ 0.77
VCPKMT-202ENST00000395860 SLC22A14Q9Y267 594 aa19.84■□□□□ 0.77
VCPKMT-202ENST00000395860 HEBP2Q9Y5Z4 205 aa19.84■□□□□ 0.77
VCPKMT-202ENST00000395860 A0A1B0GTL3 188 aa19.83■□□□□ 0.77
VCPKMT-202ENST00000395860 OR52A4PA6NMU1 304 aa19.83■□□□□ 0.77
VCPKMT-202ENST00000395860 ZNF195O14628 629 aa19.83■□□□□ 0.77
VCPKMT-202ENST00000395860 AZIN1O14977 448 aa19.83■□□□□ 0.77
VCPKMT-202ENST00000395860 FGF4P08620 206 aa19.83■□□□□ 0.77
VCPKMT-202ENST00000395860 JUNDP17535 347 aa19.83■□□□□ 0.77
VCPKMT-202ENST00000395860 PRDX3P30048 256 aaKnown RBP19.83■□□□□ 0.77
VCPKMT-202ENST00000395860 PDCD2Q16342 344 aaPredicted RBP19.83■□□□□ 0.77
VCPKMT-202ENST00000395860 RPE65Q16518 533 aa19.83■□□□□ 0.77
VCPKMT-202ENST00000395860 SPATS2Q86XZ4 545 aaKnown RBP19.83■□□□□ 0.77
VCPKMT-202ENST00000395860 FBXL6Q8N531 539 aa19.83■□□□□ 0.77
VCPKMT-202ENST00000395860 OR56A3Q8NH54 315 aa19.83■□□□□ 0.77
VCPKMT-202ENST00000395860 CAAP1Q9H8G2 361 aa19.83■□□□□ 0.77
VCPKMT-202ENST00000395860 SCHIP1Q9P0W5 487 aaPredicted RBP19.83■□□□□ 0.77
VCPKMT-202ENST00000395860 APOBEC3BQ9UH17 382 aaKnown RBP19.83■□□□□ 0.77
VCPKMT-202ENST00000395860 LNPEPQ9UIQ6 1025 aa19.83■□□□□ 0.77
VCPKMT-202ENST00000395860 PCOLCE2Q9UKZ9 415 aa19.83■□□□□ 0.77
VCPKMT-202ENST00000395860 PLAGL1Q9UM63 463 aa19.83■□□□□ 0.77
VCPKMT-202ENST00000395860 OR4F21O95013 312 aa19.83■□□□□ 0.76
VCPKMT-202ENST00000395860 MTHFD1P11586 935 aaKnown RBP19.83■□□□□ 0.76
VCPKMT-202ENST00000395860 PNLIPRP1P54315 467 aa19.83■□□□□ 0.76
VCPKMT-202ENST00000395860 GRB7Q14451 532 aa19.83■□□□□ 0.76
VCPKMT-202ENST00000395860 VWA5B1Q5TIE3 1220 aa19.83■□□□□ 0.76
VCPKMT-202ENST00000395860 LYSMD4Q5XG99 296 aa19.83■□□□□ 0.76
VCPKMT-202ENST00000395860 PMS2CLQ68D20 193 aa19.83■□□□□ 0.76
VCPKMT-202ENST00000395860 THOC6Q86W42 341 aaKnown RBP19.83■□□□□ 0.76
VCPKMT-202ENST00000395860 DCBLD1Q8N8Z6 715 aa19.83■□□□□ 0.76
VCPKMT-202ENST00000395860 CDK15Q96Q40 435 aa19.83■□□□□ 0.76
VCPKMT-202ENST00000395860 KCNA7Q96RP8 456 aa19.83■□□□□ 0.76
VCPKMT-202ENST00000395860 EBF4Q9BQW3 602 aa19.83■□□□□ 0.76
VCPKMT-202ENST00000395860 NUF2Q9BZD4 464 aa19.83■□□□□ 0.76
VCPKMT-202ENST00000395860 STN1Q9H668 368 aaKnown RBP19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms