RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 CCL22O00626 93 aa15.21■□□□□ 0.03
SNCA-205ENST00000394991 PCDH17O14917 1159 aa15.21■□□□□ 0.03
SNCA-205ENST00000394991 KLHL18O94889 574 aa15.21■□□□□ 0.03
SNCA-205ENST00000394991 PEBP1P30086 187 aaKnown RBP15.21■□□□□ 0.03
SNCA-205ENST00000394991 SHMT2P34897 504 aa15.21■□□□□ 0.03
SNCA-205ENST00000394991 PTGER4P35408 488 aa15.21■□□□□ 0.03
SNCA-205ENST00000394991 CDKN2BP42772 138 aa15.21■□□□□ 0.03
SNCA-205ENST00000394991 NR2C2P49116 596 aa15.21■□□□□ 0.03
SNCA-205ENST00000394991 CDKN1CP49918 316 aaPredicted RBP15.21■□□□□ 0.03
SNCA-205ENST00000394991 MSLNQ13421 630 aaPredicted RBP15.21■□□□□ 0.03
SNCA-205ENST00000394991 NKG7Q16617 165 aa15.21■□□□□ 0.03
SNCA-205ENST00000394991 TAZQ16635 292 aa15.21■□□□□ 0.03
SNCA-205ENST00000394991 FCRL6Q6DN72 434 aa15.21■□□□□ 0.03
SNCA-205ENST00000394991 RPUSD3Q6P087 351 aaKnown RBP15.21■□□□□ 0.03
SNCA-205ENST00000394991 LINC00696Q6ZRV3 163 aa15.21■□□□□ 0.03
SNCA-205ENST00000394991 FAM20CQ8IXL6 584 aa15.21■□□□□ 0.03
SNCA-205ENST00000394991 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.21■□□□□ 0.03
SNCA-205ENST00000394991 ULK4Q96C45 1275 aa15.21■□□□□ 0.03
SNCA-205ENST00000394991 APOL2Q9BQE5 337 aa15.21■□□□□ 0.03
SNCA-205ENST00000394991 RSPH14Q9UHP6 348 aa15.21■□□□□ 0.03
SNCA-205ENST00000394991 PLCL2Q9UPR0 1127 aa15.21■□□□□ 0.03
SNCA-205ENST00000394991 HYOU1Q9Y4L1 999 aa15.21■□□□□ 0.03
SNCA-205ENST00000394991 CFAP99D6REC4 459 aa15.2■□□□□ 0.02
SNCA-205ENST00000394991 CST8O60676 142 aa15.2■□□□□ 0.02
SNCA-205ENST00000394991 ONECUT2O95948 504 aa15.2■□□□□ 0.02
SNCA-205ENST00000394991 GYPCP04921 128 aa15.2■□□□□ 0.02
SNCA-205ENST00000394991 TMEM253P0C7T8 217 aa15.2■□□□□ 0.02
SNCA-205ENST00000394991 PRSS56P0CW18 603 aa15.2■□□□□ 0.02
SNCA-205ENST00000394991 ITGALP20701 1170 aa15.2■□□□□ 0.02
SNCA-205ENST00000394991 ALAS2P22557 587 aa15.2■□□□□ 0.02
SNCA-205ENST00000394991 ZNF140P52738 457 aaPredicted RBP15.2■□□□□ 0.02
SNCA-205ENST00000394991 RPA4Q13156 261 aa15.2■□□□□ 0.02
SNCA-205ENST00000394991 MFAP5Q13361 173 aa15.2■□□□□ 0.02
SNCA-205ENST00000394991 TUBB8Q3ZCM7 444 aa15.2■□□□□ 0.02
SNCA-205ENST00000394991 LRRC38Q5VT99 294 aa15.2■□□□□ 0.02
SNCA-205ENST00000394991 IRAK1BP1Q5VVH5 260 aa15.2■□□□□ 0.02
SNCA-205ENST00000394991 ISLR2Q6UXK2 745 aa15.2■□□□□ 0.02
SNCA-205ENST00000394991 BNC2Q6ZN30 1099 aaPredicted RBP15.2■□□□□ 0.02
SNCA-205ENST00000394991 SHISA6Q6ZSJ9 500 aa15.2■□□□□ 0.02
SNCA-205ENST00000394991 TTLL10Q6ZVT0 673 aa15.2■□□□□ 0.02
SNCA-205ENST00000394991 BZW1Q7L1Q6 419 aaKnown RBP15.2■□□□□ 0.02
SNCA-205ENST00000394991 OVCH1Q7RTY7 1134 aa15.2■□□□□ 0.02
SNCA-205ENST00000394991 SNX20Q7Z614 316 aa15.2■□□□□ 0.02
SNCA-205ENST00000394991 SLC35G2Q8TBE7 412 aa15.2■□□□□ 0.02
SNCA-205ENST00000394991 CCDC120Q96HB5 630 aa15.2■□□□□ 0.02
SNCA-205ENST00000394991 THOC3Q96J01 351 aaKnown RBP15.2■□□□□ 0.02
SNCA-205ENST00000394991 QKIQ96PU8 341 aaKnown RBP eCLIP15.2■□□□□ 0.02
SNCA-205ENST00000394991 TAAR6Q96RI8 345 aa15.2■□□□□ 0.02
SNCA-205ENST00000394991 VAT1Q99536 393 aa15.2■□□□□ 0.02
SNCA-205ENST00000394991 TRIM8Q9BZR9 551 aa15.2■□□□□ 0.02
SNCA-205ENST00000394991 WDR54Q9H977 334 aa15.2■□□□□ 0.02
SNCA-205ENST00000394991 ZDHHC3Q9NYG2 299 aa15.2■□□□□ 0.02
SNCA-205ENST00000394991 EURLQ9NYK6 297 aa15.2■□□□□ 0.02
SNCA-205ENST00000394991 ITGB1BP2Q9UKP3 347 aa15.2■□□□□ 0.02
SNCA-205ENST00000394991 PLAGL1Q9UM63 463 aa15.2■□□□□ 0.02
SNCA-205ENST00000394991 A0A1B0GX78 115 aa15.19■□□□□ 0.02
SNCA-205ENST00000394991 C5orf60A6NFR6 353 aa15.19■□□□□ 0.02
SNCA-205ENST00000394991 GOLGA6L19H0YKK7 550 aa15.19■□□□□ 0.02
SNCA-205ENST00000394991 TNNT1P13805 278 aa15.19■□□□□ 0.02
SNCA-205ENST00000394991 HTR1EP28566 365 aa15.19■□□□□ 0.02
SNCA-205ENST00000394991 ADRA1AP35348 466 aa15.19■□□□□ 0.02
SNCA-205ENST00000394991 TFDP2Q14188 446 aa15.19■□□□□ 0.02
SNCA-205ENST00000394991 SLC18A3Q16572 532 aa15.19■□□□□ 0.02
SNCA-205ENST00000394991 KAZNQ674X7 775 aa15.19■□□□□ 0.02
SNCA-205ENST00000394991 RANBP10Q6VN20 620 aa15.19■□□□□ 0.02
SNCA-205ENST00000394991 CLDN19Q8N6F1 224 aa15.19■□□□□ 0.02
SNCA-205ENST00000394991 OR11G2Q8NGC1 345 aa15.19■□□□□ 0.02
SNCA-205ENST00000394991 OR1N1Q8NGS0 311 aa15.19■□□□□ 0.02
SNCA-205ENST00000394991 HEXDCQ8WVB3 486 aa15.19■□□□□ 0.02
SNCA-205ENST00000394991 NR4A3Q92570 626 aa15.19■□□□□ 0.02
SNCA-205ENST00000394991 HAUS1Q96CS2 278 aa15.19■□□□□ 0.02
SNCA-205ENST00000394991 GBA3Q9H227 469 aa15.19■□□□□ 0.02
SNCA-205ENST00000394991 SLC26A1Q9H2B4 701 aa15.19■□□□□ 0.02
SNCA-205ENST00000394991 SOX17Q9H6I2 414 aaPredicted RBP15.19■□□□□ 0.02
SNCA-205ENST00000394991 C10orf88Q9H8K7 445 aa15.19■□□□□ 0.02
SNCA-205ENST00000394991 MRM3Q9HC36 420 aaKnown RBP15.19■□□□□ 0.02
SNCA-205ENST00000394991 CTSFQ9UBX1 484 aa15.19■□□□□ 0.02
SNCA-205ENST00000394991 KLHL20Q9Y2M5 609 aa15.19■□□□□ 0.02
SNCA-205ENST00000394991 LUC7L2Q9Y383 392 aaKnown RBP15.19■□□□□ 0.02
SNCA-205ENST00000394991 TRBV5-4A0A0C4DH59 114 aa15.18■□□□□ 0.02
SNCA-205ENST00000394991 ALBP02768 609 aa15.18■□□□□ 0.02
SNCA-205ENST00000394991 MAGP20916 626 aa15.18■□□□□ 0.02
SNCA-205ENST00000394991 MCM3P25205 808 aa15.18■□□□□ 0.02
SNCA-205ENST00000394991 ACADLP28330 430 aa15.18■□□□□ 0.02
SNCA-205ENST00000394991 GEMP55040 296 aa15.18■□□□□ 0.02
SNCA-205ENST00000394991 RBBP7Q16576 425 aa15.18■□□□□ 0.02
SNCA-205ENST00000394991 SLC5A12Q1EHB4 618 aa15.18■□□□□ 0.02
SNCA-205ENST00000394991 ZNF630Q2M218 657 aaPredicted RBP15.18■□□□□ 0.02
SNCA-205ENST00000394991 ASTE1Q2TB18 679 aaPredicted RBP15.18■□□□□ 0.02
SNCA-205ENST00000394991 MRGPRGQ86SM5 289 aa15.18■□□□□ 0.02
SNCA-205ENST00000394991 SERPINA9Q86WD7 417 aa15.18■□□□□ 0.02
SNCA-205ENST00000394991 ZNF295-AS1Q8N0V1 137 aa15.18■□□□□ 0.02
SNCA-205ENST00000394991 ZNF808Q8N4W9 903 aaPredicted RBP15.18■□□□□ 0.02
SNCA-205ENST00000394991 DTWD1Q8N5C7 304 aa15.18■□□□□ 0.02
SNCA-205ENST00000394991 DLG3Q92796 817 aa15.18■□□□□ 0.02
SNCA-205ENST00000394991 MAGEB10Q96LZ2 347 aaPredicted RBP15.18■□□□□ 0.02
SNCA-205ENST00000394991 VPS37BQ9H9H4 285 aa15.18■□□□□ 0.02
SNCA-205ENST00000394991 DDX56Q9NY93 547 aaKnown RBP15.18■□□□□ 0.02
SNCA-205ENST00000394991 OR6C2Q9NZP2 312 aa15.18■□□□□ 0.02
SNCA-205ENST00000394991 ASF1AQ9Y294 204 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms