RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 HOXD13P35453 343 aa16.88■□□□□ 0.29
SIN3A-203ENST00000394949 NRLP54845 237 aa16.88■□□□□ 0.29
SIN3A-203ENST00000394949 AP1S1P61966 158 aa16.88■□□□□ 0.29
SIN3A-203ENST00000394949 C9orf64Q5T6V5 341 aa16.88■□□□□ 0.29
SIN3A-203ENST00000394949 PDE12Q6L8Q7 609 aaKnown RBP16.88■□□□□ 0.29
SIN3A-203ENST00000394949 CYS1Q717R9 158 aa16.88■□□□□ 0.29
SIN3A-203ENST00000394949 POLR2J3Q9H1A7 115 aaKnown RBP16.88■□□□□ 0.29
SIN3A-203ENST00000394949 TOR3AQ9H497 397 aa16.88■□□□□ 0.29
SIN3A-203ENST00000394949 TLL1O43897 1013 aa16.88■□□□□ 0.29
SIN3A-203ENST00000394949 AHSGP02765 367 aa16.88■□□□□ 0.29
SIN3A-203ENST00000394949 MYCLP1P12525 358 aaPredicted RBP16.88■□□□□ 0.29
SIN3A-203ENST00000394949 NAE1Q13564 534 aa16.88■□□□□ 0.29
SIN3A-203ENST00000394949 ZNF181Q2M3W8 571 aa16.88■□□□□ 0.29
SIN3A-203ENST00000394949 RNASE12Q5GAN4 147 aaKnown RBP16.88■□□□□ 0.29
SIN3A-203ENST00000394949 TBC1D17Q9HA65 648 aa16.88■□□□□ 0.29
SIN3A-203ENST00000394949 GABBR2O75899 941 aa16.88■□□□□ 0.29
SIN3A-203ENST00000394949 RASAL1O95294 804 aa16.88■□□□□ 0.29
SIN3A-203ENST00000394949 CSTF2P33240 577 aaKnown RBP eCLIP16.88■□□□□ 0.29
SIN3A-203ENST00000394949 RGS8P57771 180 aaPredicted RBP16.88■□□□□ 0.29
SIN3A-203ENST00000394949 ZNF33AQ06730 810 aa16.88■□□□□ 0.29
SIN3A-203ENST00000394949 DSC3Q14574 896 aa16.88■□□□□ 0.29
SIN3A-203ENST00000394949 SLC10A6Q3KNW5 377 aa16.88■□□□□ 0.29
SIN3A-203ENST00000394949 FRMD6Q96NE9 622 aa16.88■□□□□ 0.29
SIN3A-203ENST00000394949 TLE6Q9H808 572 aa16.88■□□□□ 0.29
SIN3A-203ENST00000394949 CKLFQ9UBR5 152 aa16.88■□□□□ 0.29
SIN3A-203ENST00000394949 SEC14L4Q9UDX3 406 aa16.88■□□□□ 0.29
SIN3A-203ENST00000394949 SLIT2O94813 1529 aa16.88■□□□□ 0.29
SIN3A-203ENST00000394949 GRM6O15303 877 aa16.87■□□□□ 0.29
SIN3A-203ENST00000394949 IFNA6P05013 189 aa16.87■□□□□ 0.29
SIN3A-203ENST00000394949 POU2F1P14859 743 aa16.87■□□□□ 0.29
SIN3A-203ENST00000394949 MAZP56270 477 aaKnown RBP16.87■□□□□ 0.29
SIN3A-203ENST00000394949 DNASE1L3Q13609 305 aa16.87■□□□□ 0.29
SIN3A-203ENST00000394949 UBE2J2Q8N2K1 259 aa16.87■□□□□ 0.29
SIN3A-203ENST00000394949 KLHL6Q8WZ60 621 aa16.87■□□□□ 0.29
SIN3A-203ENST00000394949 BORCS6Q96GS4 357 aa16.87■□□□□ 0.29
SIN3A-203ENST00000394949 ADAM7Q9H2U9 754 aa16.87■□□□□ 0.29
SIN3A-203ENST00000394949 MAT2BQ9NZL9 334 aa16.87■□□□□ 0.29
SIN3A-203ENST00000394949 CLEC4AQ9UMR7 237 aa16.87■□□□□ 0.29
SIN3A-203ENST00000394949 SPIN1Q9Y657 262 aaPredicted RBP16.87■□□□□ 0.29
SIN3A-203ENST00000394949 MID1O15344 667 aa16.87■□□□□ 0.29
SIN3A-203ENST00000394949 LDOC1O95751 146 aaPredicted RBP16.87■□□□□ 0.29
SIN3A-203ENST00000394949 SRPRAP08240 638 aaKnown RBP16.87■□□□□ 0.29
SIN3A-203ENST00000394949 HLCSP50747 726 aa16.87■□□□□ 0.29
SIN3A-203ENST00000394949 CLCN4P51793 760 aa16.87■□□□□ 0.29
SIN3A-203ENST00000394949 ABHD18Q0P651 414 aa16.87■□□□□ 0.29
SIN3A-203ENST00000394949 SERPINA9Q86WD7 417 aa16.87■□□□□ 0.29
SIN3A-203ENST00000394949 LGI4Q8N135 537 aa16.87■□□□□ 0.29
SIN3A-203ENST00000394949 SRFBP1Q8NEF9 429 aaKnown RBP16.87■□□□□ 0.29
SIN3A-203ENST00000394949 PYURFQ96I23 114 aa16.87■□□□□ 0.29
SIN3A-203ENST00000394949 TVP23BQ9NYZ1 205 aa16.87■□□□□ 0.29
SIN3A-203ENST00000394949 PLOD2O00469 737 aa16.87■□□□□ 0.29
SIN3A-203ENST00000394949 SERPINA3P01011 423 aa16.87■□□□□ 0.29
SIN3A-203ENST00000394949 IL7RP16871 459 aa16.87■□□□□ 0.29
SIN3A-203ENST00000394949 ATXN1P54253 815 aaKnown RBP16.87■□□□□ 0.29
SIN3A-203ENST00000394949 GNG2P59768 71 aa16.87■□□□□ 0.29
SIN3A-203ENST00000394949 PPP2R2BQ00005 443 aa16.87■□□□□ 0.29
SIN3A-203ENST00000394949 MEP1AQ16819 746 aa16.87■□□□□ 0.29
SIN3A-203ENST00000394949 POM121L1PQ3SYA9 428 aa16.87■□□□□ 0.29
SIN3A-203ENST00000394949 TMEM53Q6P2H8 277 aa16.87■□□□□ 0.29
SIN3A-203ENST00000394949 FBXO42Q6P3S6 717 aa16.87■□□□□ 0.29
SIN3A-203ENST00000394949 RTL4Q6ZR62 310 aa16.87■□□□□ 0.29
SIN3A-203ENST00000394949 ZNF433Q8N7K0 673 aaPredicted RBP16.87■□□□□ 0.29
SIN3A-203ENST00000394949 TMEM27Q9HBJ8 222 aa16.87■□□□□ 0.29
SIN3A-203ENST00000394949 MLXQ9UH92 298 aa16.87■□□□□ 0.29
SIN3A-203ENST00000394949 GPSM3Q9Y4H4 160 aa16.87■□□□□ 0.29
SIN3A-203ENST00000394949 H3BM21 787 aa16.87■□□□□ 0.29
SIN3A-203ENST00000394949 CACNB4O00305 520 aaPredicted RBP16.87■□□□□ 0.29
SIN3A-203ENST00000394949 C1RP00736 705 aa16.87■□□□□ 0.29
SIN3A-203ENST00000394949 PIK3CBP42338 1070 aa16.87■□□□□ 0.29
SIN3A-203ENST00000394949 PAFAH1B3Q15102 231 aaKnown RBP16.87■□□□□ 0.29
SIN3A-203ENST00000394949 ASCC1Q8N9N2 400 aaKnown RBP16.87■□□□□ 0.29
SIN3A-203ENST00000394949 GPR152Q8TDT2 470 aa16.87■□□□□ 0.29
SIN3A-203ENST00000394949 PHOX2BQ99453 314 aa16.87■□□□□ 0.29
SIN3A-203ENST00000394949 CFAP97Q9P2B7 532 aa16.87■□□□□ 0.29
SIN3A-203ENST00000394949 DEC1Q9P2X7 70 aa16.87■□□□□ 0.29
SIN3A-203ENST00000394949 PHF24Q9UPV7 400 aa16.87■□□□□ 0.29
SIN3A-203ENST00000394949 ISM1B1AKI9 464 aa16.86■□□□□ 0.29
SIN3A-203ENST00000394949 CPNE3O75131 537 aaKnown RBP16.86■□□□□ 0.29
SIN3A-203ENST00000394949 CFHP08603 1231 aa16.86■□□□□ 0.29
SIN3A-203ENST00000394949 GRIA2P42262 883 aa16.86■□□□□ 0.29
SIN3A-203ENST00000394949 ZNF132P52740 706 aa16.86■□□□□ 0.29
SIN3A-203ENST00000394949 LILRA4P59901 499 aa16.86■□□□□ 0.29
SIN3A-203ENST00000394949 VBP1P61758 197 aa16.86■□□□□ 0.29
SIN3A-203ENST00000394949 MYBPC1Q00872 1141 aa16.86■□□□□ 0.29
SIN3A-203ENST00000394949 SLC51AQ86UW1 340 aa16.86■□□□□ 0.29
SIN3A-203ENST00000394949 IGDCC3Q8IVU1 814 aa16.86■□□□□ 0.29
SIN3A-203ENST00000394949 CLIP4Q8N3C7 705 aa16.86■□□□□ 0.29
SIN3A-203ENST00000394949 ANKFN1Q8N957 763 aa16.86■□□□□ 0.29
SIN3A-203ENST00000394949 SNX33Q8WV41 574 aa16.86■□□□□ 0.29
SIN3A-203ENST00000394949 C12orf42Q96LP6 360 aa16.86■□□□□ 0.29
SIN3A-203ENST00000394949 MND1Q9BWT6 205 aa16.86■□□□□ 0.29
SIN3A-203ENST00000394949 AMBNQ9NP70 447 aa16.86■□□□□ 0.29
SIN3A-203ENST00000394949 FKBPLQ9UIM3 349 aa16.86■□□□□ 0.29
SIN3A-203ENST00000394949 OR10H1Q9Y4A9 318 aa16.86■□□□□ 0.29
SIN3A-203ENST00000394949 SYN3O14994 580 aa16.86■□□□□ 0.29
SIN3A-203ENST00000394949 RAB2AP61019 212 aa16.86■□□□□ 0.29
SIN3A-203ENST00000394949 PAMR1Q6UXH9 720 aa16.86■□□□□ 0.29
SIN3A-203ENST00000394949 OSBPL2Q9H1P3 480 aa16.86■□□□□ 0.29
SIN3A-203ENST00000394949 TM9SF3Q9HD45 589 aa16.86■□□□□ 0.29
SIN3A-203ENST00000394949 SOHLH2Q9NX45 425 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms