RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 SLC22A11Q9NSA0 550 aa8.55□□□□□ -1.04
ATG4A-205ENST00000394892 SOHLH2Q9NX45 425 aa8.55□□□□□ -1.04
ATG4A-205ENST00000394892 TLK1Q9UKI8 766 aa8.55□□□□□ -1.04
ATG4A-205ENST00000394892 FARSAQ9Y285 508 aaKnown RBP8.55□□□□□ -1.04
ATG4A-205ENST00000394892 TP53TG5Q9Y2B4 290 aa8.55□□□□□ -1.04
ATG4A-205ENST00000394892 TDRKHQ9Y2W6 561 aaKnown RBP8.55□□□□□ -1.04
ATG4A-205ENST00000394892 MED16Q9Y2X0 877 aa8.55□□□□□ -1.04
ATG4A-205ENST00000394892 PCDHB3Q9Y5E6 796 aa8.55□□□□□ -1.04
ATG4A-205ENST00000394892 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.54□□□□□ -1.04
ATG4A-205ENST00000394892 A0A1W2PPV9 198 aa8.54□□□□□ -1.04
ATG4A-205ENST00000394892 C2orf74A8MZ97 194 aa8.54□□□□□ -1.04
ATG4A-205ENST00000394892 MKRN2OSH3BPM6 223 aa8.54□□□□□ -1.04
ATG4A-205ENST00000394892 MASP2O00187 686 aa8.54□□□□□ -1.04
ATG4A-205ENST00000394892 PRMT5O14744 637 aaPredicted RBP8.54□□□□□ -1.04
ATG4A-205ENST00000394892 ZNF749O43361 778 aa8.54□□□□□ -1.04
ATG4A-205ENST00000394892 KLF7O75840 302 aaPredicted RBP8.54□□□□□ -1.04
ATG4A-205ENST00000394892 VAPBO95292 243 aa8.54□□□□□ -1.04
ATG4A-205ENST00000394892 MED26O95402 600 aa8.54□□□□□ -1.04
ATG4A-205ENST00000394892 TPSB2P20231 275 aa8.54□□□□□ -1.04
ATG4A-205ENST00000394892 RPS3P23396 243 aaKnown RBP eCLIP8.54□□□□□ -1.04
ATG4A-205ENST00000394892 MAGEA3P43357 314 aa8.54□□□□□ -1.04
ATG4A-205ENST00000394892 NPY2RP49146 381 aa8.54□□□□□ -1.04
ATG4A-205ENST00000394892 ARL4DP49703 201 aa8.54□□□□□ -1.04
ATG4A-205ENST00000394892 VPS41P49754 854 aa8.54□□□□□ -1.04
ATG4A-205ENST00000394892 PMS2P54278 862 aa8.54□□□□□ -1.04
ATG4A-205ENST00000394892 ITGA1P56199 1179 aa8.54□□□□□ -1.04
ATG4A-205ENST00000394892 BASP1P80723 227 aaKnown RBP8.54□□□□□ -1.04
ATG4A-205ENST00000394892 HSPA14Q0VDF9 509 aa8.54□□□□□ -1.04
ATG4A-205ENST00000394892 PRKAA1Q13131 559 aa8.54□□□□□ -1.04
ATG4A-205ENST00000394892 TPSAB1Q15661 275 aa8.54□□□□□ -1.04
ATG4A-205ENST00000394892 CYP1B1Q16678 543 aa8.54□□□□□ -1.04
ATG4A-205ENST00000394892 UGT8Q16880 541 aa8.54□□□□□ -1.04
ATG4A-205ENST00000394892 FASTKD1Q53R41 847 aaKnown RBP8.54□□□□□ -1.04
ATG4A-205ENST00000394892 LYPLAL1Q5VWZ2 237 aa8.54□□□□□ -1.04
ATG4A-205ENST00000394892 IZUMO3Q5VZ72 239 aa8.54□□□□□ -1.04
ATG4A-205ENST00000394892 FCRL6Q6DN72 434 aa8.54□□□□□ -1.04
ATG4A-205ENST00000394892 LRRC8BQ6P9F7 803 aa8.54□□□□□ -1.04
ATG4A-205ENST00000394892 CENPUQ71F23 418 aa8.54□□□□□ -1.04
ATG4A-205ENST00000394892 NLRP9Q7RTR0 991 aa8.54□□□□□ -1.04
ATG4A-205ENST00000394892 DTWD1Q8N5C7 304 aa8.54□□□□□ -1.04
ATG4A-205ENST00000394892 ZBTB2Q8N680 514 aa8.54□□□□□ -1.04
ATG4A-205ENST00000394892 ENDOVQ8N8Q3 282 aaKnown RBP8.54□□□□□ -1.04
ATG4A-205ENST00000394892 C19orf47Q8N9M1 422 aaKnown RBP8.54□□□□□ -1.04
ATG4A-205ENST00000394892 TEX19Q8NA77 164 aa8.54□□□□□ -1.04
ATG4A-205ENST00000394892 PPHLN1Q8NEY8 458 aaKnown RBP8.54□□□□□ -1.04
ATG4A-205ENST00000394892 TRIM58Q8NG06 486 aa8.54□□□□□ -1.04
ATG4A-205ENST00000394892 OR8K5Q8NH50 307 aa8.54□□□□□ -1.04
ATG4A-205ENST00000394892 LPGAT1Q92604 370 aa8.54□□□□□ -1.04
ATG4A-205ENST00000394892 MR1Q95460 341 aa8.54□□□□□ -1.04
ATG4A-205ENST00000394892 LRRC45Q96CN5 670 aa8.54□□□□□ -1.04
ATG4A-205ENST00000394892 ALS2CR12Q96Q35 445 aa8.54□□□□□ -1.04
ATG4A-205ENST00000394892 GPR87Q9BY21 358 aa8.54□□□□□ -1.04
ATG4A-205ENST00000394892 CHRNA10Q9GZZ6 450 aa8.54□□□□□ -1.04
ATG4A-205ENST00000394892 VPS37BQ9H9H4 285 aa8.54□□□□□ -1.04
ATG4A-205ENST00000394892 PLAC1Q9HBJ0 212 aa8.54□□□□□ -1.04
ATG4A-205ENST00000394892 CATSPERZQ9NTU4 200 aa8.54□□□□□ -1.04
ATG4A-205ENST00000394892 OR6C2Q9NZP2 312 aa8.54□□□□□ -1.04
ATG4A-205ENST00000394892 KCND3Q9UK17 655 aa8.54□□□□□ -1.04
ATG4A-205ENST00000394892 SOX13Q9UN79 622 aa8.54□□□□□ -1.04
ATG4A-205ENST00000394892 POLHQ9Y253 713 aa8.54□□□□□ -1.04
ATG4A-205ENST00000394892 ZKSCAN5Q9Y2L8 839 aa8.54□□□□□ -1.04
ATG4A-205ENST00000394892 PTPN13Q12923 2485 aa8.53□□□□□ -1.04
ATG4A-205ENST00000394892 A0A0J9YY10 115 aa8.53□□□□□ -1.04
ATG4A-205ENST00000394892 ZCWPW2A0A1B0GU75 182 aa8.53□□□□□ -1.04
ATG4A-205ENST00000394892 BLACEA4D250 179 aa8.53□□□□□ -1.04
ATG4A-205ENST00000394892 CLEC18AA5D8T8 446 aa8.53□□□□□ -1.04
ATG4A-205ENST00000394892 MATN2O00339 956 aa8.53□□□□□ -1.04
ATG4A-205ENST00000394892 QSOX1O00391 747 aa8.53□□□□□ -1.04
ATG4A-205ENST00000394892 ZNF185O15231 689 aa8.53□□□□□ -1.04
ATG4A-205ENST00000394892 FANCGO15287 622 aa8.53□□□□□ -1.04
ATG4A-205ENST00000394892 NIPSNAP2O75323 286 aa8.53□□□□□ -1.04
ATG4A-205ENST00000394892 VPS4BO75351 444 aa8.53□□□□□ -1.04
ATG4A-205ENST00000394892 S1PR4O95977 384 aa8.53□□□□□ -1.04
ATG4A-205ENST00000394892 KRT14P02533 472 aa8.53□□□□□ -1.04
ATG4A-205ENST00000394892 MT-ND3P03897 115 aa8.53□□□□□ -1.04
ATG4A-205ENST00000394892 CCNYL3P0C7X3 344 aa8.53□□□□□ -1.04
ATG4A-205ENST00000394892 MAGP20916 626 aa8.53□□□□□ -1.04
ATG4A-205ENST00000394892 SHMT2P34897 504 aa8.53□□□□□ -1.04
ATG4A-205ENST00000394892 COILP38432 576 aaPredicted RBP8.53□□□□□ -1.04
ATG4A-205ENST00000394892 PTGIRP43119 386 aa8.53□□□□□ -1.04
ATG4A-205ENST00000394892 BDKRB1P46663 353 aa8.53□□□□□ -1.04
ATG4A-205ENST00000394892 SNRPNP63162 240 aaKnown RBP8.53□□□□□ -1.04
ATG4A-205ENST00000394892 PRAMEP78395 509 aa8.53□□□□□ -1.04
ATG4A-205ENST00000394892 TIAL1Q01085 375 aaKnown RBP eCLIP8.53□□□□□ -1.04
ATG4A-205ENST00000394892 GPS1Q13098 491 aa8.53□□□□□ -1.04
ATG4A-205ENST00000394892 SLC5A12Q1EHB4 618 aa8.53□□□□□ -1.04
ATG4A-205ENST00000394892 TYSND1Q2T9J0 566 aa8.53□□□□□ -1.04
ATG4A-205ENST00000394892 DNAJC21Q5F1R6 531 aaKnown RBP8.53□□□□□ -1.04
ATG4A-205ENST00000394892 TMTC4Q5T4D3 741 aa8.53□□□□□ -1.04
ATG4A-205ENST00000394892 ZNF549Q6P9A3 640 aa8.53□□□□□ -1.04
ATG4A-205ENST00000394892 CLEC18BQ6UXF7 455 aa8.53□□□□□ -1.04
ATG4A-205ENST00000394892 TAX1BP1Q86VP1 789 aa8.53□□□□□ -1.04
ATG4A-205ENST00000394892 APLFQ8IW19 511 aaPredicted RBP8.53□□□□□ -1.04
ATG4A-205ENST00000394892 SYTL1Q8IYJ3 562 aa8.53□□□□□ -1.04
ATG4A-205ENST00000394892 SLC35F6Q8N357 371 aa8.53□□□□□ -1.04
ATG4A-205ENST00000394892 EFCAB3Q8N7B9 438 aa8.53□□□□□ -1.04
ATG4A-205ENST00000394892 CLEC18CQ8NCF0 446 aa8.53□□□□□ -1.04
ATG4A-205ENST00000394892 CFAP61Q8NHU2 1237 aa8.53□□□□□ -1.04
ATG4A-205ENST00000394892 GIMAP7Q8NHV1 300 aa8.53□□□□□ -1.04
ATG4A-205ENST00000394892 FAM136AQ96C01 138 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms