RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 SLC25A36Q96CQ1 311 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 DUSP26Q9BV47 211 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 RMI1Q9H9A7 625 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 Q9Y3F1 56 aa10.2□□□□□ -0.78
COL4A6-203ENST00000394872 ATRNL1Q5VV63 1379 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 ELOA3DA6NLF2 546 aaPredicted RBP10.19□□□□□ -0.78
COL4A6-203ENST00000394872 CXCR6O00574 342 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 RB1P06400 928 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 ACVR2AP27037 513 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 GRM2Q14416 872 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 PUM1Q14671 1186 aaKnown RBP eCLIP10.19□□□□□ -0.78
COL4A6-203ENST00000394872 ELOA3BQ3SY89 546 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 C6orf52Q5T4I8 152 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 AMIGO1Q86WK6 493 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 STX12Q86Y82 276 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 ELOA3Q8NG57 546 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 IFT46Q9NQC8 304 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 NOCTQ9UK39 431 aaKnown RBP10.19□□□□□ -0.78
COL4A6-203ENST00000394872 CNTN6Q9UQ52 1028 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 PLIN4Q96Q06 1357 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 A0A0J9YVX5 310 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 RFC2P35250 354 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 KIAA0930Q6ICG6 404 aaPredicted RBP10.19□□□□□ -0.78
COL4A6-203ENST00000394872 Q6ZVU0 165 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 SATL1Q86VE3 508 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 OR10H4Q8NGA5 316 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 NUSAP1Q9BXS6 441 aaKnown RBP10.19□□□□□ -0.78
COL4A6-203ENST00000394872 WNT6Q9Y6F9 365 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 ILVBLA1L0T0 632 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 OR51F1A6NGY5 319 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 ZNF726A6NNF4 738 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 TGFB1P01137 390 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 MYCLP1P12525 358 aaPredicted RBP10.19□□□□□ -0.78
COL4A6-203ENST00000394872 GDF10P55107 478 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 ABATP80404 500 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 VLDLRP98155 873 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 DPYSL2Q16555 572 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 FAM174BQ3ZCQ3 159 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 GPR33Q49SQ1 333 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 PRAMEF14Q5SWL7 426 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 PRAMEF13Q5VWM6 474 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 CHERPQ8IWX8 916 aaKnown RBP10.19□□□□□ -0.78
COL4A6-203ENST00000394872 MPP5Q8N3R9 675 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 BPIFB1Q8TDL5 484 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 NKD1Q969G9 470 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 YIPF4Q9BSR8 244 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 GSDMCQ9BYG8 508 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 MKKSQ9NPJ1 570 aaPredicted RBP10.19□□□□□ -0.78
COL4A6-203ENST00000394872 CFAP20Q9Y6A4 193 aaKnown RBP10.19□□□□□ -0.78
COL4A6-203ENST00000394872 NOS1APO75052 506 aaPredicted RBP10.19□□□□□ -0.78
COL4A6-203ENST00000394872 MTX2O75431 263 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 DHFRP00374 187 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 PIM1P11309 404 aaPredicted RBP10.19□□□□□ -0.78
COL4A6-203ENST00000394872 HOXB2P14652 356 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 PSMA1P25786 263 aaKnown RBP10.19□□□□□ -0.78
COL4A6-203ENST00000394872 IDH3AP50213 366 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 CLCNKAP51800 687 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 CLNKQ7Z7G1 428 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 GKN2Q86XP6 184 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 RBM15BQ8NDT2 890 aaKnown RBP10.19□□□□□ -0.78
COL4A6-203ENST00000394872 RGMAQ96B86 450 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 NSMCE3Q96MG7 304 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 FCRL5Q96RD9 977 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 COMMD3-BMI1R4GMX3 469 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 A0A1W2PQ45 241 aaPredicted RBP10.19□□□□□ -0.78
COL4A6-203ENST00000394872 A0A1W2PQY0 241 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 FOXO6A8MYZ6 492 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 TULP3O75386 442 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 LCA5LO95447 670 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 CRISP3P54108 245 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 BTN3A2P78410 334 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 SLC10A7Q0GE19 358 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 SIRPB2Q5JXA9 342 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 MFSD5Q6N075 450 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 BRAT1Q6PJG6 821 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 AHSA2Q719I0 299 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 NUDT13Q86X67 352 aa10.19□□□□□ -0.78
COL4A6-203ENST00000394872 PIWIL1Q96J94 861 aaKnown RBP10.19□□□□□ -0.78
COL4A6-203ENST00000394872 TFB2MQ9H5Q4 396 aaKnown RBP10.19□□□□□ -0.78
COL4A6-203ENST00000394872 A0A1W2PRB8 838 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 PRORSD1PA6NEY8 169 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 TFECO14948 347 aaPredicted RBP10.18□□□□□ -0.78
COL4A6-203ENST00000394872 PRDX6P30041 224 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 ALDH3A2P51648 485 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 HSF2Q03933 536 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 CHRNA6Q15825 494 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 SLC30A8Q8IWU4 369 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 ARMC5Q96C12 935 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 CDK15Q96Q40 435 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 UNC93B1Q9H1C4 597 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 TRIM39Q9HCM9 518 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 CNTN3Q9P232 1028 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 REM1O75628 298 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 FGF18O76093 207 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 ANGPTL1O95841 491 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 CXCR1P25024 350 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 SLC5A9Q2M3M2 681 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 MLIPQ5VWP3 458 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 IQCHQ86VS3 1027 aa10.18□□□□□ -0.78
COL4A6-203ENST00000394872 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms