RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 CNKSR3Q6P9H4 555 aa17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 LINGO4Q6UY18 593 aa17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 GCNT7Q6ZNI0 430 aa17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 BTLAQ7Z6A9 289 aa17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 ANKRD13BQ86YJ7 626 aa17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 ADHFE1Q8IWW8 467 aa17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 C10orf111Q8N326 155 aa17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 PARP8Q8N3A8 854 aa17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 ZCCHC7Q8N3Z6 543 aaKnown RBP17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 CARNMT1Q8N4J0 409 aa17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 CHCHD4Q8N4Q1 142 aa17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 BCL7CQ8WUZ0 217 aaPredicted RBP17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 SH3YL1Q96HL8 342 aaPredicted RBP17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 ZNF347Q96SE7 839 aa17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 TMEM106CQ9BVX2 250 aa17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 CIPCQ9C0C6 399 aa17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 CLMPQ9H6B4 373 aa17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 KLQ9UEF7 1012 aa17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 DNMT3LQ9UJW3 386 aa17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 C3orf18Q9UK00 162 aa17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 PCDHB1Q9Y5F3 818 aa17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 ALPK3Q96L96 1907 aa17.94■□□□□ 0.46
PCDHA1-202ENST00000394633 SCN8AQ9UQD0 1980 aa17.94■□□□□ 0.46
PCDHA1-202ENST00000394633 PTGES3LE9PB15 166 aa17.94■□□□□ 0.46
PCDHA1-202ENST00000394633 SLC28A1O00337 649 aa17.94■□□□□ 0.46
PCDHA1-202ENST00000394633 CLDN11O75508 207 aa17.94■□□□□ 0.46
PCDHA1-202ENST00000394633 GJB5O95377 273 aa17.94■□□□□ 0.46
PCDHA1-202ENST00000394633 IL6P05231 212 aa17.94■□□□□ 0.46
PCDHA1-202ENST00000394633 RETP07949 1114 aa17.94■□□□□ 0.46
PCDHA1-202ENST00000394633 ACRP10323 421 aa17.94■□□□□ 0.46
PCDHA1-202ENST00000394633 PFKLP17858 780 aa17.94■□□□□ 0.46
PCDHA1-202ENST00000394633 CA5AP35218 305 aa17.94■□□□□ 0.46
PCDHA1-202ENST00000394633 SLC11A2P49281 568 aa17.94■□□□□ 0.46
PCDHA1-202ENST00000394633 DEFB103AP81534 67 aa17.94■□□□□ 0.46
PCDHA1-202ENST00000394633 DUSP4Q13115 394 aa17.94■□□□□ 0.46
PCDHA1-202ENST00000394633 CYP2A13Q16696 494 aa17.94■□□□□ 0.46
PCDHA1-202ENST00000394633 DCP2Q8IU60 420 aaKnown RBP17.94■□□□□ 0.46
PCDHA1-202ENST00000394633 PLPP6Q8IY26 295 aa17.94■□□□□ 0.46
PCDHA1-202ENST00000394633 CHPFQ8IZ52 775 aa17.94■□□□□ 0.46
PCDHA1-202ENST00000394633 TMCO5AQ8N6Q1 288 aa17.94■□□□□ 0.46
PCDHA1-202ENST00000394633 GLB1L3Q8NCI6 653 aaPredicted RBP17.94■□□□□ 0.46
PCDHA1-202ENST00000394633 NCLNQ969V3 563 aa17.94■□□□□ 0.46
PCDHA1-202ENST00000394633 RETREG1Q9H6L5 497 aa17.94■□□□□ 0.46
PCDHA1-202ENST00000394633 KAT8Q9H7Z6 458 aaKnown RBP17.94■□□□□ 0.46
PCDHA1-202ENST00000394633 FBXO10Q9UK96 956 aa17.94■□□□□ 0.46
PCDHA1-202ENST00000394633 OARD1Q9Y530 152 aa17.94■□□□□ 0.46
PCDHA1-202ENST00000394633 PIKFYVEQ9Y2I7 2098 aa17.94■□□□□ 0.46
PCDHA1-202ENST00000394633 SLC38A8A6NNN8 435 aa17.94■□□□□ 0.46
PCDHA1-202ENST00000394633 AREL1O15033 823 aa17.94■□□□□ 0.46
PCDHA1-202ENST00000394633 E2F6O75461 281 aa17.94■□□□□ 0.46
PCDHA1-202ENST00000394633 TIMP1P01033 207 aa17.94■□□□□ 0.46
PCDHA1-202ENST00000394633 CDH3P22223 829 aa17.94■□□□□ 0.46
PCDHA1-202ENST00000394633 ATP5C1P36542 298 aaKnown RBP17.94■□□□□ 0.46
PCDHA1-202ENST00000394633 MAGEA8P43361 318 aa17.94■□□□□ 0.46
PCDHA1-202ENST00000394633 MAD2L1Q13257 205 aaPredicted RBP17.94■□□□□ 0.46
PCDHA1-202ENST00000394633 SMU1Q2TAY7 513 aa17.94■□□□□ 0.46
PCDHA1-202ENST00000394633 SGO1Q5FBB7 561 aa17.94■□□□□ 0.46
PCDHA1-202ENST00000394633 PTRHD1Q6GMV3 140 aaKnown RBP17.94■□□□□ 0.46
PCDHA1-202ENST00000394633 NCEH1Q6PIU2 408 aa17.94■□□□□ 0.46
PCDHA1-202ENST00000394633 NETO1Q8TDF5 533 aa17.94■□□□□ 0.46
PCDHA1-202ENST00000394633 OR52E6Q96RD3 313 aa17.94■□□□□ 0.46
PCDHA1-202ENST00000394633 SH3GL1Q99961 368 aa17.94■□□□□ 0.46
PCDHA1-202ENST00000394633 BOCQ9BWV1 1114 aa17.94■□□□□ 0.46
PCDHA1-202ENST00000394633 MAGIXQ9H6Y5 334 aa17.94■□□□□ 0.46
PCDHA1-202ENST00000394633 MAGEE1Q9HCI5 957 aa17.94■□□□□ 0.46
PCDHA1-202ENST00000394633 INIPQ9NRY2 104 aa17.94■□□□□ 0.46
PCDHA1-202ENST00000394633 PKP3Q9Y446 797 aa17.94■□□□□ 0.46
PCDHA1-202ENST00000394633 ANGPTL3Q9Y5C1 460 aa17.94■□□□□ 0.46
PCDHA1-202ENST00000394633 U3KQV3 271 aa17.94■□□□□ 0.46
PCDHA1-202ENST00000394633 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.93■□□□□ 0.46
PCDHA1-202ENST00000394633 FAM220BPB1ANY3 271 aa17.93■□□□□ 0.46
PCDHA1-202ENST00000394633 SLC16A6O15403 523 aa17.93■□□□□ 0.46
PCDHA1-202ENST00000394633 NDUFS2O75306 463 aa17.93■□□□□ 0.46
PCDHA1-202ENST00000394633 UGT2B11O75310 529 aa17.93■□□□□ 0.46
PCDHA1-202ENST00000394633 SERPINA1P01009 418 aa17.93■□□□□ 0.46
PCDHA1-202ENST00000394633 KLKB1P03952 638 aa17.93■□□□□ 0.46
PCDHA1-202ENST00000394633 GNPDA1P46926 289 aa17.93■□□□□ 0.46
PCDHA1-202ENST00000394633 GZMMP51124 257 aa17.93■□□□□ 0.46
PCDHA1-202ENST00000394633 RAD23AP54725 363 aa17.93■□□□□ 0.46
PCDHA1-202ENST00000394633 GPR17Q13304 367 aa17.93■□□□□ 0.46
PCDHA1-202ENST00000394633 ZNF177Q13360 481 aaPredicted RBP17.93■□□□□ 0.46
PCDHA1-202ENST00000394633 PHKG1Q16816 387 aa17.93■□□□□ 0.46
PCDHA1-202ENST00000394633 RNF219Q5W0B1 726 aaPredicted RBP17.93■□□□□ 0.46
PCDHA1-202ENST00000394633 C16orf59Q7L2K0 433 aa17.93■□□□□ 0.46
PCDHA1-202ENST00000394633 CALHM3Q86XJ0 350 aa17.93■□□□□ 0.46
PCDHA1-202ENST00000394633 CLHC1Q8NHS4 586 aa17.93■□□□□ 0.46
PCDHA1-202ENST00000394633 CNIH3Q8TBE1 160 aa17.93■□□□□ 0.46
PCDHA1-202ENST00000394633 FBLIM1Q8WUP2 373 aa17.93■□□□□ 0.46
PCDHA1-202ENST00000394633 CPPED1Q9BRF8 314 aaPredicted RBP17.93■□□□□ 0.46
PCDHA1-202ENST00000394633 FAM126AQ9BYI3 521 aaPredicted RBP17.93■□□□□ 0.46
PCDHA1-202ENST00000394633 CCDC90BQ9GZT6 254 aa17.93■□□□□ 0.46
PCDHA1-202ENST00000394633 MCOLN1Q9GZU1 580 aa17.93■□□□□ 0.46
PCDHA1-202ENST00000394633 LRTM1Q9HBL6 345 aa17.93■□□□□ 0.46
PCDHA1-202ENST00000394633 TRNAU1APQ9NX07 287 aaKnown RBP17.93■□□□□ 0.46
PCDHA1-202ENST00000394633 ZNF490Q9ULM2 529 aaPredicted RBP17.93■□□□□ 0.46
PCDHA1-202ENST00000394633 PCDHB14Q9Y5E9 798 aa17.93■□□□□ 0.46
PCDHA1-202ENST00000394633 ZNF99A8MXY4 864 aaPredicted RBP17.92■□□□□ 0.46
PCDHA1-202ENST00000394633 CLDN25C9JDP6 229 aa17.92■□□□□ 0.46
PCDHA1-202ENST00000394633 XPNPEP2O43895 674 aa17.92■□□□□ 0.46
PCDHA1-202ENST00000394633 SEC22BO75396 215 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms