RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 KCNE1BA0A087WTH5 132 aa14.68□□□□□ -0.06
GPC3-202ENST00000394299 SLC28A1O00337 649 aa14.68□□□□□ -0.06
GPC3-202ENST00000394299 ARPC2O15144 300 aa14.68□□□□□ -0.06
GPC3-202ENST00000394299 SH3BGRLO75368 114 aa14.68□□□□□ -0.06
GPC3-202ENST00000394299 NFATC1O95644 943 aa14.68□□□□□ -0.06
GPC3-202ENST00000394299 CD22P20273 847 aa14.68□□□□□ -0.06
GPC3-202ENST00000394299 CYP2A7P20853 494 aa14.68□□□□□ -0.06
GPC3-202ENST00000394299 FCARP24071 287 aa14.68□□□□□ -0.06
GPC3-202ENST00000394299 TACR1P25103 407 aa14.68□□□□□ -0.06
GPC3-202ENST00000394299 SLC7A1P30825 629 aa14.68□□□□□ -0.06
GPC3-202ENST00000394299 HALP42357 657 aa14.68□□□□□ -0.06
GPC3-202ENST00000394299 SF1Q15637 639 aaKnown RBP14.68□□□□□ -0.06
GPC3-202ENST00000394299 FAM174BQ3ZCQ3 159 aa14.68□□□□□ -0.06
GPC3-202ENST00000394299 SPANXN4Q5MJ08 99 aa14.68□□□□□ -0.06
GPC3-202ENST00000394299 PRMT9Q6P2P2 845 aa14.68□□□□□ -0.06
GPC3-202ENST00000394299 VITQ6UXI7 678 aa14.68□□□□□ -0.06
GPC3-202ENST00000394299 PPWD1Q96BP3 646 aaKnown RBP14.68□□□□□ -0.06
GPC3-202ENST00000394299 SLC29A1Q99808 456 aa14.68□□□□□ -0.06
GPC3-202ENST00000394299 OR2AG1Q9H205 316 aa14.68□□□□□ -0.06
GPC3-202ENST00000394299 COQ10BQ9H8M1 238 aa14.68□□□□□ -0.06
GPC3-202ENST00000394299 PRKAB1Q9Y478 270 aa14.68□□□□□ -0.06
GPC3-202ENST00000394299 PCYT1BQ9Y5K3 369 aaPredicted RBP14.68□□□□□ -0.06
GPC3-202ENST00000394299 MAP3K13O43283 966 aa14.68□□□□□ -0.06
GPC3-202ENST00000394299 FTH1P02794 183 aa14.68□□□□□ -0.06
GPC3-202ENST00000394299 PRNPP04156 253 aa14.68□□□□□ -0.06
GPC3-202ENST00000394299 CKMT2P17540 419 aa14.68□□□□□ -0.06
GPC3-202ENST00000394299 VARSP26640 1264 aaKnown RBP14.68□□□□□ -0.06
GPC3-202ENST00000394299 IL12RB1P42701 662 aa14.68□□□□□ -0.06
GPC3-202ENST00000394299 OR4D2P58180 307 aa14.68□□□□□ -0.06
GPC3-202ENST00000394299 MRPS35P82673 323 aaKnown RBP14.68□□□□□ -0.06
GPC3-202ENST00000394299 CHIT1Q13231 466 aa14.68□□□□□ -0.06
GPC3-202ENST00000394299 MED21Q13503 144 aa14.68□□□□□ -0.06
GPC3-202ENST00000394299 KCNC3Q14003 757 aa14.68□□□□□ -0.06
GPC3-202ENST00000394299 SYTL3Q4VX76 610 aa14.68□□□□□ -0.06
GPC3-202ENST00000394299 C6orf52Q5T4I8 152 aa14.68□□□□□ -0.06
GPC3-202ENST00000394299 ADNP2Q6IQ32 1131 aa14.68□□□□□ -0.06
GPC3-202ENST00000394299 DNAJC14Q6Y2X3 702 aaPredicted RBP14.68□□□□□ -0.06
GPC3-202ENST00000394299 EP400NLQ6ZTU2 488 aa14.68□□□□□ -0.06
GPC3-202ENST00000394299 GFM2Q969S9 779 aaKnown RBP14.68□□□□□ -0.06
GPC3-202ENST00000394299 TMEM159Q96B96 161 aa14.68□□□□□ -0.06
GPC3-202ENST00000394299 DTD2Q96FN9 168 aa14.68□□□□□ -0.06
GPC3-202ENST00000394299 MED8Q96G25 268 aa14.68□□□□□ -0.06
GPC3-202ENST00000394299 APIPQ96GX9 242 aa14.68□□□□□ -0.06
GPC3-202ENST00000394299 EGLN2Q96KS0 407 aa14.68□□□□□ -0.06
GPC3-202ENST00000394299 CIB1Q99828 191 aa14.68□□□□□ -0.06
GPC3-202ENST00000394299 KCTD14Q9BQ13 255 aaPredicted RBP14.68□□□□□ -0.06
GPC3-202ENST00000394299 VAPAQ9P0L0 249 aa14.68□□□□□ -0.06
GPC3-202ENST00000394299 EIF3LQ9Y262 564 aaKnown RBP14.68□□□□□ -0.06
GPC3-202ENST00000394299 NEUROG3Q9Y4Z2 214 aa14.68□□□□□ -0.06
GPC3-202ENST00000394299 PRUNE2Q8WUY3 3088 aa14.68□□□□□ -0.06
GPC3-202ENST00000394299 MAGEA13PA6NCF6 341 aa14.67□□□□□ -0.06
GPC3-202ENST00000394299 EIF3FO00303 357 aaPredicted RBP14.67□□□□□ -0.06
GPC3-202ENST00000394299 AREL1O15033 823 aa14.67□□□□□ -0.06
GPC3-202ENST00000394299 DFNA5O60443 496 aa14.67□□□□□ -0.06
GPC3-202ENST00000394299 MT-ND1P03886 318 aa14.67□□□□□ -0.06
GPC3-202ENST00000394299 ENO2P09104 434 aaPredicted RBP14.67□□□□□ -0.06
GPC3-202ENST00000394299 BCKDHAP12694 445 aa14.67□□□□□ -0.06
GPC3-202ENST00000394299 C6P13671 934 aa14.67□□□□□ -0.06
GPC3-202ENST00000394299 OPRD1P41143 372 aa14.67□□□□□ -0.06
GPC3-202ENST00000394299 NAE1Q13564 534 aa14.67□□□□□ -0.06
GPC3-202ENST00000394299 LDLRAP1Q5SW96 308 aa14.67□□□□□ -0.06
GPC3-202ENST00000394299 CFAP206Q8IYR0 622 aa14.67□□□□□ -0.06
GPC3-202ENST00000394299 EME1Q96AY2 570 aa14.67□□□□□ -0.06
GPC3-202ENST00000394299 CHFRQ96EP1 664 aa14.67□□□□□ -0.06
GPC3-202ENST00000394299 CCM2Q9BSQ5 444 aa14.67□□□□□ -0.06
GPC3-202ENST00000394299 DPY30Q9C005 99 aa14.67□□□□□ -0.06
GPC3-202ENST00000394299 ELOVL6Q9H5J4 265 aa14.67□□□□□ -0.06
GPC3-202ENST00000394299 C1orf109Q9NX04 203 aa14.67□□□□□ -0.06
GPC3-202ENST00000394299 UBAP1Q9NZ09 502 aa14.67□□□□□ -0.06
GPC3-202ENST00000394299 PLXNA2O75051 1894 aa14.67□□□□□ -0.06
GPC3-202ENST00000394299 SLC5A10A0PJK1 596 aa14.67□□□□□ -0.06
GPC3-202ENST00000394299 C7orf72A4D263 438 aa14.67□□□□□ -0.06
GPC3-202ENST00000394299 PABPN1LA6NDY0 278 aaKnown RBP14.67□□□□□ -0.06
GPC3-202ENST00000394299 AKAP10O43572 662 aa14.67□□□□□ -0.06
GPC3-202ENST00000394299 AP2A2O94973 939 aa14.67□□□□□ -0.06
GPC3-202ENST00000394299 LRATO95237 230 aa14.67□□□□□ -0.06
GPC3-202ENST00000394299 KRT6AP02538 564 aa14.67□□□□□ -0.06
GPC3-202ENST00000394299 KRT6BP04259 564 aa14.67□□□□□ -0.06
GPC3-202ENST00000394299 LINGO3P0C6S8 592 aa14.67□□□□□ -0.06
GPC3-202ENST00000394299 ADRB3P13945 408 aa14.67□□□□□ -0.06
GPC3-202ENST00000394299 ZNF26P17031 533 aaPredicted RBP14.67□□□□□ -0.06
GPC3-202ENST00000394299 JAK1P23458 1154 aa14.67□□□□□ -0.06
GPC3-202ENST00000394299 KRT6CP48668 564 aa14.67□□□□□ -0.06
GPC3-202ENST00000394299 PHC1P78364 1004 aa14.67□□□□□ -0.06
GPC3-202ENST00000394299 GTDC1Q4AE62 458 aa14.67□□□□□ -0.06
GPC3-202ENST00000394299 USP39Q53GS9 565 aaKnown RBP14.67□□□□□ -0.06
GPC3-202ENST00000394299 RAET1GQ6H3X3 334 aa14.67□□□□□ -0.06
GPC3-202ENST00000394299 LRRC70Q7Z2Q7 622 aa14.67□□□□□ -0.06
GPC3-202ENST00000394299 HID1Q8IV36 788 aa14.67□□□□□ -0.06
GPC3-202ENST00000394299 TERB1Q8NA31 727 aa14.67□□□□□ -0.06
GPC3-202ENST00000394299 ADCY4Q8NFM4 1077 aa14.67□□□□□ -0.06
GPC3-202ENST00000394299 OR8D1Q8WZ84 308 aa14.67□□□□□ -0.06
GPC3-202ENST00000394299 TIFAQ96CG3 184 aa14.67□□□□□ -0.06
GPC3-202ENST00000394299 TSSK3Q96PN8 268 aa14.67□□□□□ -0.06
GPC3-202ENST00000394299 VPS35Q96QK1 796 aa14.67□□□□□ -0.06
GPC3-202ENST00000394299 OR4K3Q96R72 315 aa14.67□□□□□ -0.06
GPC3-202ENST00000394299 RPP25Q9BUL9 199 aaKnown RBP14.67□□□□□ -0.06
GPC3-202ENST00000394299 NKX2-4Q9H2Z4 354 aa14.67□□□□□ -0.06
GPC3-202ENST00000394299 TMEM245Q9H330 911 aa14.67□□□□□ -0.06
GPC3-202ENST00000394299 IKZF5Q9H5V7 419 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms