RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 CNSTQ6PJW8 725 aa29.72■■■□□ 2.35
CMTM4-202ENST00000394106 C2orf73Q8N5S3 287 aaPredicted RBP29.72■■■□□ 2.35
CMTM4-202ENST00000394106 LMNTD1Q8N9Z9 388 aa29.72■■■□□ 2.35
CMTM4-202ENST00000394106 SERBP1Q8NC51 408 aaKnown RBP eCLIP29.72■■■□□ 2.35
CMTM4-202ENST00000394106 IL17FQ96PD4 163 aa29.72■■■□□ 2.35
CMTM4-202ENST00000394106 ARHGAP9Q9BRR9 750 aa29.72■■■□□ 2.35
CMTM4-202ENST00000394106 TRIM51Q9BSJ1 452 aa29.72■■■□□ 2.35
CMTM4-202ENST00000394106 GALPQ9UBC7 116 aa29.72■■■□□ 2.35
CMTM4-202ENST00000394106 PADI1Q9ULC6 663 aa29.72■■■□□ 2.35
CMTM4-202ENST00000394106 MRPS18BQ9Y676 258 aaKnown RBP29.72■■■□□ 2.35
CMTM4-202ENST00000394106 FAM169AQ9Y6X4 670 aa29.72■■■□□ 2.35
CMTM4-202ENST00000394106 CCDC188H7C350 402 aa29.71■■■□□ 2.35
CMTM4-202ENST00000394106 NKX2-8O15522 239 aa29.71■■■□□ 2.35
CMTM4-202ENST00000394106 PRKAR1AP10644 381 aa29.71■■■□□ 2.35
CMTM4-202ENST00000394106 IVDP26440 423 aa29.71■■■□□ 2.35
CMTM4-202ENST00000394106 BDKRB1P46663 353 aa29.71■■■□□ 2.35
CMTM4-202ENST00000394106 TAX1BP1Q86VP1 789 aa29.71■■■□□ 2.35
CMTM4-202ENST00000394106 ZBTB2Q8N680 514 aa29.71■■■□□ 2.35
CMTM4-202ENST00000394106 C19orf47Q8N9M1 422 aaKnown RBP29.71■■■□□ 2.35
CMTM4-202ENST00000394106 FLVCR1-AS1Q8TAF5 88 aa29.71■■■□□ 2.35
CMTM4-202ENST00000394106 CALML6Q8TD86 181 aa29.71■■■□□ 2.35
CMTM4-202ENST00000394106 STARD8Q92502 1023 aa29.71■■■□□ 2.35
CMTM4-202ENST00000394106 FOPNLQ96NB1 174 aa29.71■■■□□ 2.35
CMTM4-202ENST00000394106 LHX9Q9NQ69 397 aa29.71■■■□□ 2.35
CMTM4-202ENST00000394106 SLC39A10Q9ULF5 831 aa29.71■■■□□ 2.35
CMTM4-202ENST00000394106 TTI1O43156 1089 aa29.7■■■□□ 2.35
CMTM4-202ENST00000394106 CPNE3O75131 537 aaKnown RBP29.7■■■□□ 2.35
CMTM4-202ENST00000394106 F8A1P23610 371 aa29.7■■■□□ 2.35
CMTM4-202ENST00000394106 PEBP1P30086 187 aaKnown RBP29.7■■■□□ 2.35
CMTM4-202ENST00000394106 GRB7Q14451 532 aa29.7■■■□□ 2.35
CMTM4-202ENST00000394106 KIR2DS3Q14952 304 aa29.7■■■□□ 2.35
CMTM4-202ENST00000394106 TBR1Q16650 682 aa29.7■■■□□ 2.35
CMTM4-202ENST00000394106 LINC00303Q3SY05 128 aa29.7■■■□□ 2.35
CMTM4-202ENST00000394106 BBS9Q3SYG4 887 aa29.7■■■□□ 2.35
CMTM4-202ENST00000394106 MSS51Q4VC12 460 aa29.7■■■□□ 2.35
CMTM4-202ENST00000394106 HSP90AA5PQ58FG0 334 aa29.7■■■□□ 2.35
CMTM4-202ENST00000394106 PRAMEF17Q5VTA0 474 aa29.7■■■□□ 2.35
CMTM4-202ENST00000394106 CDHR3Q6ZTQ4 885 aa29.7■■■□□ 2.35
CMTM4-202ENST00000394106 OR1L3Q8NH93 324 aa29.7■■■□□ 2.35
CMTM4-202ENST00000394106 MENTQ9BUN1 341 aa29.7■■■□□ 2.35
CMTM4-202ENST00000394106 CCDC68Q9H2F9 335 aa29.7■■■□□ 2.35
CMTM4-202ENST00000394106 SYTL2Q9HCH5 934 aa29.7■■■□□ 2.35
CMTM4-202ENST00000394106 LATS2Q9NRM7 1088 aa29.7■■■□□ 2.35
CMTM4-202ENST00000394106 RNF14Q9UBS8 474 aa29.7■■■□□ 2.35
CMTM4-202ENST00000394106 ATMQ13315 3056 aa29.69■■■□□ 2.34
CMTM4-202ENST00000394106 A0A0J9YY10 115 aa29.69■■■□□ 2.34
CMTM4-202ENST00000394106 KATNA1O75449 491 aa29.69■■■□□ 2.34
CMTM4-202ENST00000394106 CD9P21926 228 aa29.69■■■□□ 2.34
CMTM4-202ENST00000394106 CRYMQ14894 314 aa29.69■■■□□ 2.34
CMTM4-202ENST00000394106 KCNMB4Q86W47 210 aa29.69■■■□□ 2.34
CMTM4-202ENST00000394106 LMNTD2Q8IXW0 634 aa29.69■■■□□ 2.34
CMTM4-202ENST00000394106 LINC01555Q8NAE3 123 aa29.69■■■□□ 2.34
CMTM4-202ENST00000394106 CT55Q8WUE5 264 aa29.69■■■□□ 2.34
CMTM4-202ENST00000394106 EBNA1BP2Q99848 306 aaKnown RBP29.69■■■□□ 2.34
CMTM4-202ENST00000394106 FAM167BQ9BTA0 163 aa29.69■■■□□ 2.34
CMTM4-202ENST00000394106 TRIM31Q9BZY9 425 aa29.69■■■□□ 2.34
CMTM4-202ENST00000394106 IARS2Q9NSE4 1012 aaKnown RBP29.69■■■□□ 2.34
CMTM4-202ENST00000394106 FBXO5Q9UKT4 447 aa29.69■■■□□ 2.34
CMTM4-202ENST00000394106 RASGRF2O14827 1237 aa29.68■■■□□ 2.34
CMTM4-202ENST00000394106 C1orf105O95561 183 aa29.68■■■□□ 2.34
CMTM4-202ENST00000394106 MPP1Q00013 466 aa29.68■■■□□ 2.34
CMTM4-202ENST00000394106 MORF4L2Q15014 288 aa29.68■■■□□ 2.34
CMTM4-202ENST00000394106 SLC5A12Q1EHB4 618 aa29.68■■■□□ 2.34
CMTM4-202ENST00000394106 C16orf46Q6P387 395 aa29.68■■■□□ 2.34
CMTM4-202ENST00000394106 FAM20CQ8IXL6 584 aa29.68■■■□□ 2.34
CMTM4-202ENST00000394106 OR2L8Q8NGY9 312 aa29.68■■■□□ 2.34
CMTM4-202ENST00000394106 N4BP2L2Q92802 583 aaPredicted RBP29.68■■■□□ 2.34
CMTM4-202ENST00000394106 RAD51AP1Q96B01 352 aa29.68■■■□□ 2.34
CMTM4-202ENST00000394106 TCTN2Q96GX1 697 aa29.68■■■□□ 2.34
CMTM4-202ENST00000394106 SEMA4CQ9C0C4 833 aa29.68■■■□□ 2.34
CMTM4-202ENST00000394106 FAM60AQ9NP50 221 aa29.68■■■□□ 2.34
CMTM4-202ENST00000394106 SERTAD3Q9UJW9 196 aa29.68■■■□□ 2.34
CMTM4-202ENST00000394106 MRFAP1Q9Y605 127 aa29.68■■■□□ 2.34
CMTM4-202ENST00000394106 KRT87PA6NCN2 255 aa29.67■■■□□ 2.34
CMTM4-202ENST00000394106 C1QL1O75973 258 aa29.67■■■□□ 2.34
CMTM4-202ENST00000394106 TCN2P20062 427 aa29.67■■■□□ 2.34
CMTM4-202ENST00000394106 CYP2A7P20853 494 aa29.67■■■□□ 2.34
CMTM4-202ENST00000394106 ATP5DP30049 168 aa29.67■■■□□ 2.34
CMTM4-202ENST00000394106 CDC20Q12834 499 aa29.67■■■□□ 2.34
CMTM4-202ENST00000394106 GBX1Q14549 363 aa29.67■■■□□ 2.34
CMTM4-202ENST00000394106 ZIC1Q15915 447 aa29.67■■■□□ 2.34
CMTM4-202ENST00000394106 CCSMST1Q4G0I0 132 aa29.67■■■□□ 2.34
CMTM4-202ENST00000394106 ACSBG2Q5FVE4 666 aa29.67■■■□□ 2.34
CMTM4-202ENST00000394106 HP1BP3Q5SSJ5 553 aaPredicted RBP29.67■■■□□ 2.34
CMTM4-202ENST00000394106 FAM199XQ6PEV8 388 aaPredicted RBP29.67■■■□□ 2.34
CMTM4-202ENST00000394106 PWWP2AQ96N64 755 aa29.67■■■□□ 2.34
CMTM4-202ENST00000394106 KRT12Q99456 494 aa29.67■■■□□ 2.34
CMTM4-202ENST00000394106 TWSG1Q9GZX9 223 aa29.67■■■□□ 2.34
CMTM4-202ENST00000394106 AKIRIN1Q9H9L7 192 aaPredicted RBP29.67■■■□□ 2.34
CMTM4-202ENST00000394106 TTC4O95801 387 aa29.66■■■□□ 2.34
CMTM4-202ENST00000394106 MSL3P1P0C860 447 aa29.66■■■□□ 2.34
CMTM4-202ENST00000394106 ERVK-10P10266 1014 aa29.66■■■□□ 2.34
CMTM4-202ENST00000394106 CCNFP41002 786 aa29.66■■■□□ 2.34
CMTM4-202ENST00000394106 CLCN7P51798 805 aa29.66■■■□□ 2.34
CMTM4-202ENST00000394106 ITGA8P53708 1063 aa29.66■■■□□ 2.34
CMTM4-202ENST00000394106 MC1RQ01726 317 aa29.66■■■□□ 2.34
CMTM4-202ENST00000394106 DNASE1L3Q13609 305 aa29.66■■■□□ 2.34
CMTM4-202ENST00000394106 DEFB110Q30KQ9 67 aa29.66■■■□□ 2.34
CMTM4-202ENST00000394106 ZNF549Q6P9A3 640 aa29.66■■■□□ 2.34
CMTM4-202ENST00000394106 IGDCC3Q8IVU1 814 aa29.66■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms