RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 TMPRSS3P57727 454 aa7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 HSD11B2P80365 405 aa7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 TIAL1Q01085 375 aaKnown RBP eCLIP7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 PLOD1Q02809 727 aaPredicted RBP7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 GBX1Q14549 363 aa7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 ZIC1Q15915 447 aa7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 KYNUQ16719 465 aa7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 KLHL38Q2WGJ6 581 aa7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 BROXQ5VW32 411 aa7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 KIAA1614Q5VZ46 1190 aa7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 ARMC3Q5W041 872 aa7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 STEAP4Q687X5 459 aa7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 PWWP2BQ6NUJ5 590 aa7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 SPESP1Q6UW49 350 aa7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 ZDHHC24Q6UX98 284 aa7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 UNC5DQ6UXZ4 953 aa7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 DCUN1D3Q8IWE4 304 aa7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 CPNE9Q8IYJ1 553 aa7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 ZBED8Q8IZ13 594 aa7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 CACNA2D3Q8IZS8 1091 aa7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 IL22RA1Q8N6P7 574 aa7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 GALNT6Q8NCL4 622 aa7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 C2CD4AQ8NCU7 369 aaPredicted RBP7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 FLVCR1-AS1Q8TAF5 88 aa7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 GSDMBQ8TAX9 411 aa7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 NKD1Q969G9 470 aa7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 TRAPPC9Q96Q05 1148 aa7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 OR2A14Q96R47 310 aa7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 CCNL2Q96S94 520 aaPredicted RBP7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 FAM167BQ9BTA0 163 aa7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 AARSD1Q9BTE6 412 aaKnown RBP7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 ASPSCR1Q9BZE9 553 aa7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 ULBP3Q9BZM4 244 aa7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 SPRY4Q9C004 299 aa7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 SAYSD1Q9NPB0 183 aa7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 SEMA5BQ9P283 1151 aa7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 POLG2Q9UHN1 485 aa7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 LNPEPQ9UIQ6 1025 aa7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 CDC23Q9UJX2 597 aa7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 PILRAQ9UKJ1 303 aa7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 PCDHB11Q9Y5F2 797 aa7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 PCDHGA4Q9Y5G9 962 aa7.42□□□□□ -1.22
HMGB3P1-201ENST00000393368 LOC101059948A0A1B0GTJ6 334 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 ARHGEF33A8MVX0 844 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 H3BMM5 538 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 RASGRF2O14827 1237 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 KPNA5O15131 536 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 NRP2O60462 931 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 SPAG6O75602 509 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 ZBTB11O95625 1053 aaPredicted RBP7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 TTC4O95801 387 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 DLGAP3O95886 979 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 AHSGP02765 367 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 NTRK1P04629 796 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 FGF5P12034 268 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 MCM3P25205 808 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 CD82P27701 267 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 RAB28P51157 221 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 PLTPP55058 493 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 YBX1P67809 324 aaKnown RBP7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 CKAP4Q07065 602 aaKnown RBP7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 VAC14Q08AM6 782 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 CALCOCO2Q13137 446 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 FASTKQ14296 549 aaKnown RBP7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 PLEKHS1Q5SXH7 462 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 TEDDM1Q5T9Z0 273 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 DUPD1Q68J44 220 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 CCDC81Q6ZN84 652 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 CDHR3Q6ZTQ4 885 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 ZNF572Q7Z3I7 529 aaPredicted RBP7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 PIWIL4Q7Z3Z4 852 aaKnown RBP7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 MAATS1Q7Z4T9 603 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 CCDC25Q86WR0 208 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 PPP1R3BQ86XI6 285 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 CNTN4Q8IWV2 1026 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 NLGN4XQ8N0W4 816 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 D2HGDHQ8N465 521 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 GPATCH11Q8N954 259 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 NOA1Q8NC60 698 aaKnown RBP7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 NLGN4YQ8NFZ3 816 aaPredicted RBP7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 OR1L3Q8NH93 324 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 CD200R1Q8TD46 325 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 CALML6Q8TD86 181 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 DENND1AQ8TEH3 1009 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 KCNJ9Q92806 393 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 ZNF501Q96CX3 271 aaPredicted RBP7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 BBC3Q96PG8 261 aaPredicted RBP7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 TEFMQ96QE5 360 aaKnown RBP7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 RUFY1Q96T51 708 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 CD180Q99467 661 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 LRRC1Q9BTT6 524 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 PITPNM3Q9BZ71 974 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 CCDC68Q9H2F9 335 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 AKIRIN1Q9H9L7 192 aaPredicted RBP7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 FAM60AQ9NP50 221 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 SMYD2Q9NRG4 433 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 LATS2Q9NRM7 1088 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 C1GALT1Q9NS00 363 aa7.41□□□□□ -1.22
HMGB3P1-201ENST00000393368 FGF21Q9NSA1 209 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms