RNA–Protein interactions for RNA: ENST00000392901.10

SHTN1-203, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHTN1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-203ENST00000392901 TRPS1Q9UHF7 1281 aa17.21■□□□□ 0.35
SHTN1-203ENST00000392901 ZNF490Q9ULM2 529 aaPredicted RBP17.21■□□□□ 0.35
SHTN1-203ENST00000392901 LIN7AO14910 233 aaPredicted RBP17.21■□□□□ 0.34
SHTN1-203ENST00000392901 VEGFDO43915 354 aa17.21■□□□□ 0.34
SHTN1-203ENST00000392901 DNTTP04053 509 aa17.21■□□□□ 0.34
SHTN1-203ENST00000392901 ATXN3P54252 364 aaPredicted RBP17.21■□□□□ 0.34
SHTN1-203ENST00000392901 NFE2L1Q14494 772 aa17.21■□□□□ 0.34
SHTN1-203ENST00000392901 VPS26BQ4G0F5 336 aa17.21■□□□□ 0.34
SHTN1-203ENST00000392901 ZNF658BQ4V348 819 aaPredicted RBP17.21■□□□□ 0.34
SHTN1-203ENST00000392901 HABP4Q5JVS0 413 aaKnown RBP17.21■□□□□ 0.34
SHTN1-203ENST00000392901 IER5LQ5T953 404 aa17.21■□□□□ 0.34
SHTN1-203ENST00000392901 TTC23LQ6PF05 361 aa17.21■□□□□ 0.34
SHTN1-203ENST00000392901 JADE3Q92613 823 aa17.21■□□□□ 0.34
SHTN1-203ENST00000392901 LRCH3Q96II8 777 aa17.21■□□□□ 0.34
SHTN1-203ENST00000392901 ANKRD27Q96NW4 1050 aa17.21■□□□□ 0.34
SHTN1-203ENST00000392901 OSBPL6Q9BZF3 934 aa17.21■□□□□ 0.34
SHTN1-203ENST00000392901 AIG1Q9NVV5 245 aa17.21■□□□□ 0.34
SHTN1-203ENST00000392901 ZFR2Q9UPR6 939 aaKnown RBP17.21■□□□□ 0.34
SHTN1-203ENST00000392901 GRXCR2A6NFK2 248 aa17.2■□□□□ 0.34
SHTN1-203ENST00000392901 LSM1O15116 133 aaKnown RBP17.2■□□□□ 0.34
SHTN1-203ENST00000392901 NVLO15381 856 aaKnown RBP17.2■□□□□ 0.34
SHTN1-203ENST00000392901 CAPN3P20807 821 aa17.2■□□□□ 0.34
SHTN1-203ENST00000392901 COL9A1P20849 921 aa17.2■□□□□ 0.34
SHTN1-203ENST00000392901 ME2P23368 584 aa17.2■□□□□ 0.34
SHTN1-203ENST00000392901 PFN3P60673 137 aa17.2■□□□□ 0.34
SHTN1-203ENST00000392901 CDK3Q00526 305 aa17.2■□□□□ 0.34
SHTN1-203ENST00000392901 INPP5AQ14642 412 aa17.2■□□□□ 0.34
SHTN1-203ENST00000392901 COL19A1Q14993 1142 aa17.2■□□□□ 0.34
SHTN1-203ENST00000392901 AP5B1Q2VPB7 878 aa17.2■□□□□ 0.34
SHTN1-203ENST00000392901 ADAMTSL4Q6UY14 1074 aa17.2■□□□□ 0.34
SHTN1-203ENST00000392901 KBTBD6Q86V97 674 aa17.2■□□□□ 0.34
SHTN1-203ENST00000392901 FBXL8Q96CD0 374 aa17.2■□□□□ 0.34
SHTN1-203ENST00000392901 MED8Q96G25 268 aa17.2■□□□□ 0.34
SHTN1-203ENST00000392901 COX14Q96I36 57 aa17.2■□□□□ 0.34
SHTN1-203ENST00000392901 TEX37Q96LM6 180 aa17.2■□□□□ 0.34
SHTN1-203ENST00000392901 GABRG3Q99928 467 aa17.2■□□□□ 0.34
SHTN1-203ENST00000392901 SLC39A3Q9BRY0 314 aa17.2■□□□□ 0.34
SHTN1-203ENST00000392901 KCNK12Q9HB15 430 aa17.2■□□□□ 0.34
SHTN1-203ENST00000392901 DNAJC11Q9NVH1 559 aa17.2■□□□□ 0.34
SHTN1-203ENST00000392901 GPR34Q9UPC5 381 aa17.2■□□□□ 0.34
SHTN1-203ENST00000392901 OR1A2Q9Y585 309 aa17.2■□□□□ 0.34
SHTN1-203ENST00000392901 ZFC3H1O60293 1989 aaKnown RBP17.2■□□□□ 0.34
SHTN1-203ENST00000392901 A0A1W2PQF6 199 aa17.19■□□□□ 0.34
SHTN1-203ENST00000392901 UFM1P61960 85 aa17.19■□□□□ 0.34
SHTN1-203ENST00000392901 HMGCS1Q01581 520 aa17.19■□□□□ 0.34
SHTN1-203ENST00000392901 NAE1Q13564 534 aa17.19■□□□□ 0.34
SHTN1-203ENST00000392901 FGL2Q14314 439 aa17.19■□□□□ 0.34
SHTN1-203ENST00000392901 MUM1Q2TAK8 710 aa17.19■□□□□ 0.34
SHTN1-203ENST00000392901 RFTN2Q52LD8 501 aaPredicted RBP17.19■□□□□ 0.34
SHTN1-203ENST00000392901 AGTRAPQ6RW13 159 aa17.19■□□□□ 0.34
SHTN1-203ENST00000392901 PPFIBP2Q8ND30 876 aa17.19■□□□□ 0.34
SHTN1-203ENST00000392901 RSRC1Q96IZ7 334 aaKnown RBP17.19■□□□□ 0.34
SHTN1-203ENST00000392901 CCDC138Q96M89 665 aa17.19■□□□□ 0.34
SHTN1-203ENST00000392901 PKP4Q99569 1192 aa17.19■□□□□ 0.34
SHTN1-203ENST00000392901 INTS7Q9NVH2 962 aaKnown RBP17.19■□□□□ 0.34
SHTN1-203ENST00000392901 MAP10Q9P2G4 905 aa17.19■□□□□ 0.34
SHTN1-203ENST00000392901 DOCK9Q9BZ29 2069 aa17.19■□□□□ 0.34
SHTN1-203ENST00000392901 VGLL3A8MV65 326 aa17.19■□□□□ 0.34
SHTN1-203ENST00000392901 H3BNX3 289 aa17.19■□□□□ 0.34
SHTN1-203ENST00000392901 MANBAO00462 879 aa17.19■□□□□ 0.34
SHTN1-203ENST00000392901 SLC16A8O95907 504 aa17.19■□□□□ 0.34
SHTN1-203ENST00000392901 GRSF1Q12849 480 aaKnown RBP eCLIP17.19■□□□□ 0.34
SHTN1-203ENST00000392901 FLOT2Q14254 428 aa17.19■□□□□ 0.34
SHTN1-203ENST00000392901 IMPG1Q17R60 797 aa17.19■□□□□ 0.34
SHTN1-203ENST00000392901 RALGPS2Q86X27 583 aaPredicted RBP17.19■□□□□ 0.34
SHTN1-203ENST00000392901 KBTBD2Q8IY47 623 aa17.19■□□□□ 0.34
SHTN1-203ENST00000392901 SLC44A3Q8N4M1 653 aa17.19■□□□□ 0.34
SHTN1-203ENST00000392901 CHCHD4Q8N4Q1 142 aa17.19■□□□□ 0.34
SHTN1-203ENST00000392901 OR2L2Q8NH16 312 aa17.19■□□□□ 0.34
SHTN1-203ENST00000392901 DNAJC9Q8WXX5 260 aa17.19■□□□□ 0.34
SHTN1-203ENST00000392901 NAF1Q96HR8 494 aaKnown RBP17.19■□□□□ 0.34
SHTN1-203ENST00000392901 LINC00615Q96LM1 132 aaPredicted RBP17.19■□□□□ 0.34
SHTN1-203ENST00000392901 STOX2Q9P2F5 926 aaPredicted RBP17.19■□□□□ 0.34
SHTN1-203ENST00000392901 C17orf113A0A1B0GUU1 675 aa17.18■□□□□ 0.34
SHTN1-203ENST00000392901 MGAT4DA6NG13 374 aa17.18■□□□□ 0.34
SHTN1-203ENST00000392901 RGS14O43566 566 aa17.18■□□□□ 0.34
SHTN1-203ENST00000392901 C1orf105O95561 183 aa17.18■□□□□ 0.34
SHTN1-203ENST00000392901 SLC2A4P14672 509 aa17.18■□□□□ 0.34
SHTN1-203ENST00000392901 HALP42357 657 aa17.18■□□□□ 0.34
SHTN1-203ENST00000392901 ZFP36L2P47974 494 aaKnown RBP17.18■□□□□ 0.34
SHTN1-203ENST00000392901 SGCGQ13326 291 aa17.18■□□□□ 0.34
SHTN1-203ENST00000392901 C8orf82Q6P1X6 216 aaPredicted RBP17.18■□□□□ 0.34
SHTN1-203ENST00000392901 XKR5Q6UX68 686 aa17.18■□□□□ 0.34
SHTN1-203ENST00000392901 C11orf96Q7Z7L8 435 aa17.18■□□□□ 0.34
SHTN1-203ENST00000392901 SPDYE1Q8NFV5 336 aaPredicted RBP17.18■□□□□ 0.34
SHTN1-203ENST00000392901 IL1RL2Q9HB29 575 aa17.18■□□□□ 0.34
SHTN1-203ENST00000392901 SLC52A3Q9NQ40 469 aa17.18■□□□□ 0.34
SHTN1-203ENST00000392901 CROTQ9UKG9 612 aa17.18■□□□□ 0.34
SHTN1-203ENST00000392901 CCL27Q9Y4X3 112 aa17.18■□□□□ 0.34
SHTN1-203ENST00000392901 TRIM38O00635 465 aa17.18■□□□□ 0.34
SHTN1-203ENST00000392901 ACOT8O14734 319 aa17.18■□□□□ 0.34
SHTN1-203ENST00000392901 CLGNO14967 610 aa17.18■□□□□ 0.34
SHTN1-203ENST00000392901 ANGPT2O15123 496 aa17.18■□□□□ 0.34
SHTN1-203ENST00000392901 PRAMEF4O60810 478 aa17.18■□□□□ 0.34
SHTN1-203ENST00000392901 SLC22A3O75751 556 aa17.18■□□□□ 0.34
SHTN1-203ENST00000392901 KRT6AP02538 564 aa17.18■□□□□ 0.34
SHTN1-203ENST00000392901 KRT6BP04259 564 aa17.18■□□□□ 0.34
SHTN1-203ENST00000392901 KRT6CP48668 564 aa17.18■□□□□ 0.34
SHTN1-203ENST00000392901 NEK2P51955 445 aa17.18■□□□□ 0.34
SHTN1-203ENST00000392901 RPL38P63173 70 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms